EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005004511 (Gene tree)
Gene ID: -
Gene Symbol: RAD54L
Alias: RAD54A|hHR54|hRAD54
Full Name: RAD54 like
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 28198 bases
Position: chrPSZQ01001717.1:5939868-5968065
Accession: 9826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005006577	ResIII	PF04851.15	8.2e-09	1	1
ENSEASP00005006574	ResIII	PF04851.15	9e-09	1	1
ENSEASP00005006559	ResIII	PF04851.15	9.2e-09	1	1
ENSEASP00005006549	ResIII	PF04851.15	9.6e-09	1	1
ENSEASP00005006591	ResIII	PF04851.15	9.8e-09	1	1
ENSEASP00005006591	DEAD	PF00270.29	1.6e-06	1	1
ENSEASP00005006577	DEAD	PF00270.29	2e-06	1	1
ENSEASP00005006559	DEAD	PF00270.29	2.2e-06	1	1
ENSEASP00005006574	DEAD	PF00270.29	2.2e-06	1	1
ENSEASP00005006549	DEAD	PF00270.29	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005007194	RAD54L-205	2103	-	ENSEASP00005006577	700 (aa)	-	-
ENSEAST00005007185	RAD54L-203	1563	-	ENSEASP00005006570	520 (aa)	-	-
ENSEAST00005007163	RAD54L-201	2295	-	ENSEASP00005006549	764 (aa)	-	-
ENSEAST00005007208	RAD54L-206	2088	-	ENSEASP00005006591	695 (aa)	-	-
ENSEAST00005007174	RAD54L-202	2241	-	ENSEASP00005006559	746 (aa)	-	-
ENSEAST00005007189	RAD54L-204	2244	-	ENSEASP00005006574	747 (aa)	-	-

Gene Model

Click here to download ENSEASG00005004511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005004511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005004511	RAD54L	75	32.252	ENSEASG00005008218	SMARCA1	50	32.252
ENSEASG00005004511	RAD54L	75	32.129	ENSEASG00005001866	SMARCA5	54	31.846
ENSEASG00005004511	RAD54L	70	30.000	ENSEASG00005011764	HELLS	72	30.000
ENSEASG00005004511	RAD54L	87	44.086	ENSEASG00005004021	-	72	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005004511	RAD54L	99	95.302	ENSG00000085999	RAD54L	100	100.000	Homo_sapiens
ENSEASG00005004511	RAD54L	99	77.151	ENSAPOG00000011643	rad54l	99	77.069	Acanthochromis_polyacanthus
ENSEASG00005004511	RAD54L	100	96.386	ENSAMEG00000013902	RAD54L	100	96.386	Ailuropoda_melanoleuca
ENSEASG00005004511	RAD54L	99	77.212	ENSACIG00000001939	rad54l	99	77.078	Amphilophus_citrinellus
ENSEASG00005004511	RAD54L	99	79.784	ENSAOCG00000017576	rad54l	99	79.567	Amphiprion_ocellaris
ENSEASG00005004511	RAD54L	95	82.309	ENSAPEG00000020658	rad54l	97	81.081	Amphiprion_percula
ENSEASG00005004511	RAD54L	99	80.747	ENSATEG00000006767	rad54l	99	81.974	Anabas_testudineus
ENSEASG00005004511	RAD54L	97	85.841	ENSAPLG00000006389	RAD54L	99	86.000	Anas_platyrhynchos
ENSEASG00005004511	RAD54L	96	87.164	ENSACAG00000002312	RAD54L	99	84.048	Anolis_carolinensis
ENSEASG00005004511	RAD54L	99	94.504	ENSANAG00000035439	RAD54L	99	94.497	Aotus_nancymaae
ENSEASG00005004511	RAD54L	98	78.540	ENSACLG00000018711	rad54l	99	76.644	Astatotilapia_calliptera
ENSEASG00005004511	RAD54L	99	80.000	ENSAMXG00000012777	rad54l	99	79.597	Astyanax_mexicanus
ENSEASG00005004511	RAD54L	99	95.845	ENSBTAG00000019901	RAD54L	99	95.845	Bos_taurus
ENSEASG00005004511	RAD54L	95	59.138	WBGene00004298	rad-54	84	58.393	Caenorhabditis_elegans
ENSEASG00005004511	RAD54L	99	91.700	ENSCJAG00000021080	RAD54L	94	94.296	Callithrix_jacchus
ENSEASG00005004511	RAD54L	99	96.113	ENSCAFG00000004272	RAD54L	99	96.113	Canis_familiaris
ENSEASG00005004511	RAD54L	100	96.118	ENSCAFG00020015066	RAD54L	100	96.118	Canis_lupus_dingo
ENSEASG00005004511	RAD54L	99	95.448	ENSCHIG00000020118	RAD54L	99	95.448	Capra_hircus
ENSEASG00005004511	RAD54L	99	92.895	ENSTSYG00000002032	RAD54L	99	92.895	Carlito_syrichta
ENSEASG00005004511	RAD54L	99	94.497	ENSCPOG00000006768	RAD54L	99	94.497	Cavia_porcellus
ENSEASG00005004511	RAD54L	99	95.168	ENSCCAG00000025783	RAD54L	99	95.168	Cebus_capucinus
ENSEASG00005004511	RAD54L	99	95.034	ENSCATG00000030589	RAD54L	99	95.034	Cercocebus_atys
ENSEASG00005004511	RAD54L	99	95.034	ENSCLAG00000004645	RAD54L	99	95.034	Chinchilla_lanigera
ENSEASG00005004511	RAD54L	99	95.168	ENSCSAG00000001229	RAD54L	99	95.168	Chlorocebus_sabaeus
ENSEASG00005004511	RAD54L	99	86.059	ENSCPBG00000005675	RAD54L	99	86.059	Chrysemys_picta_bellii
ENSEASG00005004511	RAD54L	96	66.764	ENSCING00000024456	-	99	62.420	Ciona_intestinalis
ENSEASG00005004511	RAD54L	96	66.766	ENSCSAVG00000010859	-	99	62.500	Ciona_savignyi
ENSEASG00005004511	RAD54L	99	94.899	ENSCANG00000034891	RAD54L	99	94.899	Colobus_angolensis_palliatus
ENSEASG00005004511	RAD54L	99	93.020	ENSCGRG00001014807	Rad54l	99	93.020	Cricetulus_griseus_chok1gshd
ENSEASG00005004511	RAD54L	99	93.020	ENSCGRG00000016038	Rad54l	99	93.020	Cricetulus_griseus_crigri
ENSEASG00005004511	RAD54L	99	79.429	ENSCSEG00000001983	rad54l	99	77.703	Cynoglossus_semilaevis
ENSEASG00005004511	RAD54L	92	79.921	ENSCVAG00000019561	rad54l	100	79.921	Cyprinodon_variegatus
ENSEASG00005004511	RAD54L	96	82.836	ENSDARG00000018623	rad54l	99	79.380	Danio_rerio
ENSEASG00005004511	RAD54L	99	93.960	ENSDNOG00000003395	RAD54L	99	93.960	Dasypus_novemcinctus
ENSEASG00005004511	RAD54L	96	87.964	ENSDORG00000002632	Rad54l	99	83.578	Dipodomys_ordii
ENSEASG00005004511	RAD54L	96	57.926	FBgn0002989	okr	95	54.847	Drosophila_melanogaster
ENSEASG00005004511	RAD54L	78	95.122	ENSETEG00000000550	RAD54L	78	95.122	Echinops_telfairi
ENSEASG00005004511	RAD54L	99	99.598	ENSECAG00000008760	RAD54L	99	100.000	Equus_caballus
ENSEASG00005004511	RAD54L	96	94.776	ENSEEUG00000008113	RAD54L	99	88.993	Erinaceus_europaeus
ENSEASG00005004511	RAD54L	99	80.080	ENSELUG00000002295	rad54l	99	80.080	Esox_lucius
ENSEASG00005004511	RAD54L	99	95.570	ENSFCAG00000003444	RAD54L	99	95.570	Felis_catus
ENSEASG00005004511	RAD54L	99	84.203	ENSFALG00000009480	RAD54L	99	84.203	Ficedula_albicollis
ENSEASG00005004511	RAD54L	99	94.765	ENSFDAG00000007806	RAD54L	99	94.765	Fukomys_damarensis
ENSEASG00005004511	RAD54L	62	78.132	ENSFHEG00000009824	rad54l	78	77.263	Fundulus_heteroclitus
ENSEASG00005004511	RAD54L	97	80.531	ENSGMOG00000014568	rad54l	99	78.349	Gadus_morhua
ENSEASG00005004511	RAD54L	99	84.430	ENSGALG00000010356	RAD54L	92	84.430	Gallus_gallus
ENSEASG00005004511	RAD54L	91	78.877	ENSGAFG00000011110	rad54l	100	78.783	Gambusia_affinis
ENSEASG00005004511	RAD54L	99	79.088	ENSGACG00000003111	rad54l	97	78.686	Gasterosteus_aculeatus
ENSEASG00005004511	RAD54L	99	85.542	ENSGAGG00000014089	RAD54L	96	85.542	Gopherus_agassizii
ENSEASG00005004511	RAD54L	99	95.168	ENSGGOG00000010602	RAD54L	99	95.168	Gorilla_gorilla
ENSEASG00005004511	RAD54L	98	78.686	ENSHBUG00000007793	rad54l	99	76.913	Haplochromis_burtoni
ENSEASG00005004511	RAD54L	99	94.765	ENSHGLG00000000753	RAD54L	99	94.765	Heterocephalus_glaber_female
ENSEASG00005004511	RAD54L	99	94.631	ENSHGLG00100016987	RAD54L	99	94.631	Heterocephalus_glaber_male
ENSEASG00005004511	RAD54L	96	81.045	ENSIPUG00000015999	rad54l	99	80.401	Ictalurus_punctatus
ENSEASG00005004511	RAD54L	99	94.638	ENSSTOG00000029125	RAD54L	99	94.638	Ictidomys_tridecemlineatus
ENSEASG00005004511	RAD54L	99	80.403	ENSJJAG00000000235	-	99	80.268	Jaculus_jaculus
ENSEASG00005004511	RAD54L	96	80.804	ENSKMAG00000009944	rad54l	99	77.658	Kryptolebias_marmoratus
ENSEASG00005004511	RAD54L	99	79.677	ENSLBEG00000014617	rad54l	99	81.606	Labrus_bergylta
ENSEASG00005004511	RAD54L	99	80.403	ENSLOCG00000004144	rad54l	100	81.065	Lepisosteus_oculatus
ENSEASG00005004511	RAD54L	99	95.710	ENSLAFG00000007583	RAD54L	100	95.710	Loxodonta_africana
ENSEASG00005004511	RAD54L	99	95.040	ENSMFAG00000031241	RAD54L	99	95.040	Macaca_fascicularis
ENSEASG00005004511	RAD54L	99	95.040	ENSMMUG00000011568	RAD54L	99	95.040	Macaca_mulatta
ENSEASG00005004511	RAD54L	99	95.040	ENSMNEG00000038562	RAD54L	99	95.040	Macaca_nemestrina
ENSEASG00005004511	RAD54L	99	95.168	ENSMLEG00000038145	RAD54L	99	95.168	Mandrillus_leucophaeus
ENSEASG00005004511	RAD54L	97	81.057	ENSMAMG00000022180	rad54l	100	81.525	Mastacembelus_armatus
ENSEASG00005004511	RAD54L	98	78.394	ENSMZEG00005018081	rad54l	99	76.510	Maylandia_zebra
ENSEASG00005004511	RAD54L	99	84.450	ENSMGAG00000010634	RAD54L	99	84.450	Meleagris_gallopavo
ENSEASG00005004511	RAD54L	99	92.886	ENSMAUG00000020076	Rad54l	99	92.886	Mesocricetus_auratus
ENSEASG00005004511	RAD54L	99	95.040	ENSMICG00000003266	RAD54L	99	95.040	Microcebus_murinus
ENSEASG00005004511	RAD54L	99	93.691	ENSMOCG00000001778	Rad54l	99	93.691	Microtus_ochrogaster
ENSEASG00005004511	RAD54L	99	75.770	ENSMALG00000021148	rad54l	99	75.636	Monopterus_albus
ENSEASG00005004511	RAD54L	94	94.992	MGP_CAROLIEiJ_G0026325	Rad54l	99	89.426	Mus_caroli
ENSEASG00005004511	RAD54L	99	94.094	ENSMUSG00000028702	Rad54l	99	94.094	Mus_musculus
ENSEASG00005004511	RAD54L	99	93.960	MGP_PahariEiJ_G0028657	Rad54l	99	93.960	Mus_pahari
ENSEASG00005004511	RAD54L	99	94.228	MGP_SPRETEiJ_G0027297	Rad54l	99	94.228	Mus_spretus
ENSEASG00005004511	RAD54L	99	95.984	ENSMPUG00000012883	RAD54L	99	95.984	Mustela_putorius_furo
ENSEASG00005004511	RAD54L	99	96.649	ENSMLUG00000003763	RAD54L	99	96.649	Myotis_lucifugus
ENSEASG00005004511	RAD54L	99	92.617	ENSNGAG00000024213	Rad54l	99	92.617	Nannospalax_galili
ENSEASG00005004511	RAD54L	99	94.631	ENSNLEG00000016548	RAD54L	99	94.631	Nomascus_leucogenys
ENSEASG00005004511	RAD54L	96	85.075	ENSMEUG00000006793	RAD54L	99	85.207	Notamacropus_eugenii
ENSEASG00005004511	RAD54L	90	94.077	ENSOPRG00000016016	RAD54L	90	94.077	Ochotona_princeps
ENSEASG00005004511	RAD54L	99	95.168	ENSODEG00000008519	RAD54L	99	95.168	Octodon_degus
ENSEASG00005004511	RAD54L	98	78.686	ENSONIG00000007659	rad54l	99	76.779	Oreochromis_niloticus
ENSEASG00005004511	RAD54L	99	94.228	ENSOCUG00000005229	RAD54L	99	94.228	Oryctolagus_cuniculus
ENSEASG00005004511	RAD54L	96	81.315	ENSORLG00000002958	rad54l	99	77.868	Oryzias_latipes
ENSEASG00005004511	RAD54L	96	81.315	ENSORLG00020006554	rad54l	99	81.085	Oryzias_latipes_hni
ENSEASG00005004511	RAD54L	96	81.315	ENSORLG00015002907	rad54l	99	78.003	Oryzias_latipes_hsok
ENSEASG00005004511	RAD54L	96	81.465	ENSOMEG00000007770	rad54l	100	77.927	Oryzias_melastigma
ENSEASG00005004511	RAD54L	99	95.181	ENSOARG00000002264	RAD54L	99	95.181	Ovis_aries
ENSEASG00005004511	RAD54L	99	95.302	ENSPPAG00000031222	RAD54L	99	95.302	Pan_paniscus
ENSEASG00005004511	RAD54L	99	95.570	ENSPPRG00000010317	RAD54L	99	95.570	Panthera_pardus
ENSEASG00005004511	RAD54L	99	95.570	ENSPTIG00000012200	RAD54L	99	95.570	Panthera_tigris_altaica
ENSEASG00005004511	RAD54L	99	95.168	ENSPTRG00000000689	RAD54L	99	95.168	Pan_troglodytes
ENSEASG00005004511	RAD54L	99	95.168	ENSPANG00000016295	RAD54L	99	95.168	Papio_anubis
ENSEASG00005004511	RAD54L	99	76.312	ENSPKIG00000016172	rad54l	99	76.043	Paramormyrops_kingsleyae
ENSEASG00005004511	RAD54L	99	86.179	ENSPSIG00000003258	RAD54L	99	86.179	Pelodiscus_sinensis
ENSEASG00005004511	RAD54L	98	78.038	ENSPMGG00000016335	rad54l	99	75.000	Periophthalmus_magnuspinnatus
ENSEASG00005004511	RAD54L	99	93.557	ENSPEMG00000011422	Rad54l	99	93.557	Peromyscus_maniculatus_bairdii
ENSEASG00005004511	RAD54L	99	70.800	ENSPMAG00000007719	rad54l	99	70.800	Petromyzon_marinus
ENSEASG00005004511	RAD54L	99	87.383	ENSPCIG00000029032	RAD54L	99	87.383	Phascolarctos_cinereus
ENSEASG00005004511	RAD54L	86	83.833	ENSPFOG00000013732	rad54l	99	81.775	Poecilia_formosa
ENSEASG00005004511	RAD54L	86	80.725	ENSPLAG00000023416	rad54l	99	80.725	Poecilia_latipinna
ENSEASG00005004511	RAD54L	91	79.351	ENSPMEG00000008299	rad54l	100	79.228	Poecilia_mexicana
ENSEASG00005004511	RAD54L	96	80.896	ENSPREG00000019955	rad54l	99	77.224	Poecilia_reticulata
ENSEASG00005004511	RAD54L	93	94.643	ENSPPYG00000001398	RAD54L	99	94.643	Pongo_abelii
ENSEASG00005004511	RAD54L	80	91.748	ENSPCAG00000005323	RAD54L	80	91.748	Procavia_capensis
ENSEASG00005004511	RAD54L	99	95.302	ENSPCOG00000015423	RAD54L	99	95.302	Propithecus_coquereli
ENSEASG00005004511	RAD54L	99	75.668	ENSPNYG00000002942	rad54l	98	76.554	Pundamilia_nyererei
ENSEASG00005004511	RAD54L	99	79.195	ENSPNAG00000012483	rad54l	99	79.195	Pygocentrus_nattereri
ENSEASG00005004511	RAD54L	99	93.154	ENSRNOG00000013148	Rad54l	99	93.154	Rattus_norvegicus
ENSEASG00005004511	RAD54L	99	94.899	ENSRBIG00000043495	RAD54L	99	94.899	Rhinopithecus_bieti
ENSEASG00005004511	RAD54L	99	95.034	ENSRROG00000020844	RAD54L	99	95.034	Rhinopithecus_roxellana
ENSEASG00005004511	RAD54L	85	48.142	YGL163C	RAD54	71	48.615	Saccharomyces_cerevisiae
ENSEASG00005004511	RAD54L	99	95.168	ENSSBOG00000024672	RAD54L	99	95.168	Saimiri_boliviensis_boliviensis
ENSEASG00005004511	RAD54L	99	87.450	ENSSHAG00000000110	RAD54L	99	87.183	Sarcophilus_harrisii
ENSEASG00005004511	RAD54L	99	79.463	ENSSDUG00000019147	rad54l	99	79.195	Seriola_dumerili
ENSEASG00005004511	RAD54L	99	79.463	ENSSLDG00000012330	rad54l	99	79.329	Seriola_lalandi_dorsalis
ENSEASG00005004511	RAD54L	79	95.298	ENSSARG00000006689	RAD54L	100	89.085	Sorex_araneus
ENSEASG00005004511	RAD54L	99	78.812	ENSSPAG00000011016	rad54l	99	78.812	Stegastes_partitus
ENSEASG00005004511	RAD54L	99	95.302	ENSSSCG00000003905	RAD54L	99	95.302	Sus_scrofa
ENSEASG00005004511	RAD54L	99	83.668	ENSTGUG00000008233	RAD54L	99	83.802	Taeniopygia_guttata
ENSEASG00005004511	RAD54L	99	76.305	ENSTRUG00000008410	rad54l	96	79.736	Takifugu_rubripes
ENSEASG00005004511	RAD54L	98	77.875	ENSTNIG00000004716	rad54l	99	75.436	Tetraodon_nigroviridis
ENSEASG00005004511	RAD54L	96	92.836	ENSTTRG00000006315	RAD54L	99	87.383	Tursiops_truncatus
ENSEASG00005004511	RAD54L	99	95.822	ENSUAMG00000011824	RAD54L	99	95.822	Ursus_americanus
ENSEASG00005004511	RAD54L	99	94.609	ENSUMAG00000023603	RAD54L	99	94.609	Ursus_maritimus
ENSEASG00005004511	RAD54L	99	96.113	ENSVVUG00000007201	RAD54L	99	96.113	Vulpes_vulpes
ENSEASG00005004511	RAD54L	97	77.974	ENSXETG00000004369	rad54l	99	78.090	Xenopus_tropicalis
ENSEASG00005004511	RAD54L	55	75.061	ENSXCOG00000016028	rad54l	81	78.804	Xiphophorus_couchianus