EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEASG00005004736 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Equus_asinus_asinus
Status
putative
Strand
Plus strand
Length
22154 bases
Position
chrPSZQ01006343.1:586749-608902
Accession
7330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEASP00005006407RRM_1PF00076.225.4e-3412
ENSEASP00005006407RRM_1PF00076.225.4e-3422
ENSEASP00005006406RRM_1PF00076.226.4e-3412
ENSEASP00005006406RRM_1PF00076.226.4e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEAST00005007005MSI1-2022195-ENSEASP00005006407343 (aa)-UPI0000EE28D1
ENSEAST00005007004MSI1-2012252-ENSEASP00005006406362 (aa)-UPI0000073DD8
Gene Model
Click here to download ENSEASG00005004736's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005004736's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEASG00005004736MSI15036.196ENSEASG00005004245-6636.196
ENSEASG00005004736MSI15440.887ENSEASG00005022530HNRNPA37141.509
ENSEASG00005004736MSI15245.251ENSEASG00005016278HNRNPD7638.462
ENSEASG00005004736MSI15049.133ENSEASG00005016276-5839.271
ENSEASG00005004736MSI19072.638ENSEASG00005002965MSI29769.688
ENSEASG00005004736MSI15341.848ENSEASG00005023455-8241.827
ENSEASG00005004736MSI15242.308ENSEASG00005010182HNRNPA17539.004
ENSEASG00005004736MSI15241.989ENSEASG00005012961-6841.989
ENSEASG00005004736MSI15246.111ENSEASG00005012572-7539.453
ENSEASG00005004736MSI15238.462ENSEASG00005008801-6238.889
ENSEASG00005004736MSI15534.021ENSEASG00005019017TARDBP6733.133
ENSEASG00005004736MSI15541.346ENSEASG00005021718DAZAP15141.346
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEASG00005004736MSI1100100.000ENSG00000135097MSI1100100.000Homo_sapiens
ENSEASG00005004736MSI110083.791ENSAPOG00000003191MSI110083.791Acanthochromis_polyacanthus
ENSEASG00005004736MSI110084.254ENSAPOG00000023458-10084.254Acanthochromis_polyacanthus
ENSEASG00005004736MSI19885.635ENSAMEG00000013302MSI110085.635Ailuropoda_melanoleuca
ENSEASG00005004736MSI19487.742ENSACIG00000017754-7887.742Amphilophus_citrinellus
ENSEASG00005004736MSI19881.734ENSAOCG00000009031-9581.734Amphiprion_ocellaris
ENSEASG00005004736MSI110083.791ENSAOCG00000003804MSI110083.791Amphiprion_ocellaris
ENSEASG00005004736MSI110084.254ENSAPEG00000006857-8484.254Amphiprion_percula
ENSEASG00005004736MSI110083.791ENSAPEG00000003245MSI110083.791Amphiprion_percula
ENSEASG00005004736MSI110081.375ENSATEG00000017059MSI110081.375Anabas_testudineus
ENSEASG00005004736MSI110078.415ENSATEG00000023779-10078.415Anabas_testudineus
ENSEASG00005004736MSI110096.419ENSACAG00000002762MSI110096.419Anolis_carolinensis
ENSEASG00005004736MSI18296.309ENSANAG00000027901-9296.309Aotus_nancymaae
ENSEASG00005004736MSI1100100.000ENSANAG00000027151MSI1100100.000Aotus_nancymaae
ENSEASG00005004736MSI110083.978ENSACLG00000000117-10085.337Astatotilapia_calliptera
ENSEASG00005004736MSI110083.242ENSACLG00000011230MSI110083.242Astatotilapia_calliptera
ENSEASG00005004736MSI19484.984ENSAMXG00000038960msi17584.984Astyanax_mexicanus
ENSEASG00005004736MSI1100100.000ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSEASG00005004736MSI1100100.000ENSCJAG00000008578MSI1100100.000Callithrix_jacchus
ENSEASG00005004736MSI110099.724ENSCAFG00000010283MSI110099.724Canis_familiaris
ENSEASG00005004736MSI194100.000ENSCAFG00020020585MSI1100100.000Canis_lupus_dingo
ENSEASG00005004736MSI110094.580ENSCHIG00000024304MSI110094.580Capra_hircus
ENSEASG00005004736MSI194100.000ENSTSYG00000033949MSI195100.000Carlito_syrichta
ENSEASG00005004736MSI19493.040ENSCAPG00000003919MSI18989.776Cavia_aperea
ENSEASG00005004736MSI198100.000ENSCPOG00000012361MSI1100100.000Cavia_porcellus
ENSEASG00005004736MSI1100100.000ENSCCAG00000035567MSI1100100.000Cebus_capucinus
ENSEASG00005004736MSI1100100.000ENSCATG00000030019MSI1100100.000Cercocebus_atys
ENSEASG00005004736MSI198100.000ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSEASG00005004736MSI17596.390ENSCSAG00000002265MSI19696.390Chlorocebus_sabaeus
ENSEASG00005004736MSI110095.856ENSCPBG00000011349MSI110095.856Chrysemys_picta_bellii
ENSEASG00005004736MSI198100.000ENSCANG00000040651MSI1100100.000Colobus_angolensis_palliatus
ENSEASG00005004736MSI1100100.000ENSCGRG00001018883Msi1100100.000Cricetulus_griseus_chok1gshd
ENSEASG00005004736MSI194100.000ENSCGRG00000002191Msi172100.000Cricetulus_griseus_crigri
ENSEASG00005004736MSI110083.516ENSCSEG00000005834-10083.516Cynoglossus_semilaevis
ENSEASG00005004736MSI110084.257ENSCSEG00000008352-10084.257Cynoglossus_semilaevis
ENSEASG00005004736MSI19882.919ENSCSEG00000011032MSI110082.919Cynoglossus_semilaevis
ENSEASG00005004736MSI110085.423ENSCVAG00000009100MSI110085.423Cyprinodon_variegatus
ENSEASG00005004736MSI15261.194ENSCVAG00000017430zgc:1107969461.194Cyprinodon_variegatus
ENSEASG00005004736MSI16468.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSEASG00005004736MSI18082.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSEASG00005004736MSI19886.408ENSDARG00000010710msi19986.408Danio_rerio
ENSEASG00005004736MSI19889.970ENSDNOG00000005713MSI19189.970Dasypus_novemcinctus
ENSEASG00005004736MSI19899.102ENSDORG00000005610Msi19995.480Dipodomys_ordii
ENSEASG00005004736MSI19895.732ENSETEG00000004756MSI110095.732Echinops_telfairi
ENSEASG00005004736MSI1100100.000ENSECAG00000017526MSI1100100.000Equus_caballus
ENSEASG00005004736MSI19679.943ENSELUG00000023219MSI19280.387Esox_lucius
ENSEASG00005004736MSI19481.232ENSELUG00000023280-10080.938Esox_lucius
ENSEASG00005004736MSI1100100.000ENSFCAG00000011007MSI1100100.000Felis_catus
ENSEASG00005004736MSI19895.820ENSFALG00000007574MSI110095.820Ficedula_albicollis
ENSEASG00005004736MSI19899.695ENSFDAG00000019586MSI110099.695Fukomys_damarensis
ENSEASG00005004736MSI110084.530ENSFHEG00000022446MSI110084.530Fundulus_heteroclitus
ENSEASG00005004736MSI110083.791ENSFHEG00000003560-10083.791Fundulus_heteroclitus
ENSEASG00005004736MSI110076.584ENSGMOG00000017838-10076.584Gadus_morhua
ENSEASG00005004736MSI110082.597ENSGMOG00000001006MSI19982.320Gadus_morhua
ENSEASG00005004736MSI19495.238ENSGALG00000007227MSI19886.957Gallus_gallus
ENSEASG00005004736MSI110068.786ENSGAFG00000005860-10068.786Gambusia_affinis
ENSEASG00005004736MSI19885.380ENSGAFG00000021522MSI19485.380Gambusia_affinis
ENSEASG00005004736MSI110080.663ENSGACG00000008674-10080.663Gasterosteus_aculeatus
ENSEASG00005004736MSI110083.425ENSGACG00000012679MSI110083.425Gasterosteus_aculeatus
ENSEASG00005004736MSI110095.580ENSGAGG00000016037MSI110095.580Gopherus_agassizii
ENSEASG00005004736MSI194100.000ENSGGOG00000010328MSI1100100.000Gorilla_gorilla
ENSEASG00005004736MSI110083.978ENSHBUG00000011841-10083.978Haplochromis_burtoni
ENSEASG00005004736MSI110083.242ENSHBUG00000021921MSI110083.242Haplochromis_burtoni
ENSEASG00005004736MSI110099.724ENSHGLG00000012782MSI110099.724Heterocephalus_glaber_female
ENSEASG00005004736MSI19899.695ENSHGLG00100016848MSI110099.695Heterocephalus_glaber_male
ENSEASG00005004736MSI110079.539ENSHCOG00000012067-10079.539Hippocampus_comes
ENSEASG00005004736MSI19885.714ENSHCOG00000012019MSI110085.714Hippocampus_comes
ENSEASG00005004736MSI110082.320ENSIPUG00000001976msi110082.320Ictalurus_punctatus
ENSEASG00005004736MSI194100.000ENSSTOG00000009799MSI1100100.000Ictidomys_tridecemlineatus
ENSEASG00005004736MSI1100100.000ENSJJAG00000010463Msi1100100.000Jaculus_jaculus
ENSEASG00005004736MSI110086.589ENSJJAG00000010643-10086.589Jaculus_jaculus
ENSEASG00005004736MSI19888.509ENSKMAG00000019877-10088.509Kryptolebias_marmoratus
ENSEASG00005004736MSI110083.702ENSKMAG00000011251MSI110083.702Kryptolebias_marmoratus
ENSEASG00005004736MSI110085.423ENSLBEG00000008789MSI110085.423Labrus_bergylta
ENSEASG00005004736MSI19887.307ENSLBEG00000001375-10083.242Labrus_bergylta
ENSEASG00005004736MSI19887.427ENSLACG00000018287MSI110087.427Latimeria_chalumnae
ENSEASG00005004736MSI15370.000ENSLOCG00000008618zgc:1107967170.000Lepisosteus_oculatus
ENSEASG00005004736MSI19189.426ENSLAFG00000009412MSI110089.426Loxodonta_africana
ENSEASG00005004736MSI198100.000ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSEASG00005004736MSI19798.291ENSMMUG00000031527MSI19798.291Macaca_mulatta
ENSEASG00005004736MSI1100100.000ENSMNEG00000040034MSI1100100.000Macaca_nemestrina
ENSEASG00005004736MSI198100.000ENSMLEG00000003921MSI1100100.000Mandrillus_leucophaeus
ENSEASG00005004736MSI19887.616ENSMAMG00000018426-10083.791Mastacembelus_armatus
ENSEASG00005004736MSI110083.425ENSMAMG00000002279MSI110083.425Mastacembelus_armatus
ENSEASG00005004736MSI110083.242ENSMZEG00005026892MSI110083.242Maylandia_zebra
ENSEASG00005004736MSI110085.131ENSMZEG00005000340-10085.131Maylandia_zebra
ENSEASG00005004736MSI16898.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSEASG00005004736MSI171100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSEASG00005004736MSI1100100.000ENSMICG00000033181MSI1100100.000Microcebus_murinus
ENSEASG00005004736MSI110099.724ENSMOCG00000002286Msi110099.724Microtus_ochrogaster
ENSEASG00005004736MSI19880.805ENSMMOG00000010492MSI19480.805Mola_mola
ENSEASG00005004736MSI19886.538ENSMMOG00000012265-9985.220Mola_mola
ENSEASG00005004736MSI19167.771ENSMODG00000003189-10067.771Monodelphis_domestica
ENSEASG00005004736MSI110083.978ENSMALG00000017889MSI110083.978Monopterus_albus
ENSEASG00005004736MSI19886.646ENSMALG00000001426-10086.646Monopterus_albus
ENSEASG00005004736MSI110099.448MGP_CAROLIEiJ_G0027626Msi110099.490Mus_caroli
ENSEASG00005004736MSI110099.448ENSMUSG00000054256Msi110099.490Mus_musculus
ENSEASG00005004736MSI110099.171MGP_PahariEiJ_G0024206Msi110099.171Mus_pahari
ENSEASG00005004736MSI110099.448MGP_SPRETEiJ_G0028624Msi110099.490Mus_spretus
ENSEASG00005004736MSI194100.000ENSMPUG00000003168MSI1100100.000Mustela_putorius_furo
ENSEASG00005004736MSI19490.179ENSMLUG00000010313MSI110090.179Myotis_lucifugus
ENSEASG00005004736MSI19893.855ENSNGAG00000014508Msi19793.855Nannospalax_galili
ENSEASG00005004736MSI18877.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSEASG00005004736MSI110085.131ENSNBRG00000000841-10085.131Neolamprologus_brichardi
ENSEASG00005004736MSI19189.634ENSNLEG00000015636MSI110089.634Nomascus_leucogenys
ENSEASG00005004736MSI19477.744ENSMEUG00000015759MSI110077.744Notamacropus_eugenii
ENSEASG00005004736MSI19492.063ENSOPRG00000016879MSI110092.063Ochotona_princeps
ENSEASG00005004736MSI198100.000ENSODEG00000006328MSI1100100.000Octodon_degus
ENSEASG00005004736MSI110083.516ENSONIG00000019452-10083.516Oreochromis_niloticus
ENSEASG00005004736MSI19789.513ENSONIG00000011182MSI110083.978Oreochromis_niloticus
ENSEASG00005004736MSI19499.678ENSOCUG00000027716MSI110099.678Oryctolagus_cuniculus
ENSEASG00005004736MSI19886.774ENSORLG00000019978-10084.530Oryzias_latipes
ENSEASG00005004736MSI110083.791ENSORLG00000029593MSI110083.791Oryzias_latipes
ENSEASG00005004736MSI110084.530ENSORLG00020001208-7184.530Oryzias_latipes_hni
ENSEASG00005004736MSI19887.926ENSORLG00020008266MSI19987.926Oryzias_latipes_hni
ENSEASG00005004736MSI19887.926ENSORLG00015003916MSI19987.926Oryzias_latipes_hsok
ENSEASG00005004736MSI110085.714ENSORLG00015013672-7685.714Oryzias_latipes_hsok
ENSEASG00005004736MSI19886.842ENSOMEG00000002272-10084.615Oryzias_melastigma
ENSEASG00005004736MSI110084.807ENSOMEG00000017536MSI110084.807Oryzias_melastigma
ENSEASG00005004736MSI19995.604ENSOGAG00000003847MSI19995.604Otolemur_garnettii
ENSEASG00005004736MSI19496.061ENSOARG00000012097MSI110096.061Ovis_aries
ENSEASG00005004736MSI198100.000ENSPPAG00000043073MSI1100100.000Pan_paniscus
ENSEASG00005004736MSI1100100.000ENSPPRG00000000370MSI1100100.000Panthera_pardus
ENSEASG00005004736MSI194100.000ENSPTIG00000008913MSI1100100.000Panthera_tigris_altaica
ENSEASG00005004736MSI1100100.000ENSPTRG00000005531MSI1100100.000Pan_troglodytes
ENSEASG00005004736MSI110099.724ENSPANG00000006335MSI110099.724Papio_anubis
ENSEASG00005004736MSI110086.880ENSPKIG00000016497MSI110086.880Paramormyrops_kingsleyae
ENSEASG00005004736MSI19685.879ENSPKIG00000023575-10083.978Paramormyrops_kingsleyae
ENSEASG00005004736MSI18092.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSEASG00005004736MSI19892.105ENSPSIG00000011608-9392.105Pelodiscus_sinensis
ENSEASG00005004736MSI19486.774ENSPMGG00000000514MSI19786.774Periophthalmus_magnuspinnatus
ENSEASG00005004736MSI19473.939ENSPMGG00000007743-8974.242Periophthalmus_magnuspinnatus
ENSEASG00005004736MSI19994.958ENSPEMG00000010491Msi19994.958Peromyscus_maniculatus_bairdii
ENSEASG00005004736MSI110083.791ENSPFOG00000008319-8683.791Poecilia_formosa
ENSEASG00005004736MSI19491.964ENSPFOG00000013113MSI110084.254Poecilia_formosa
ENSEASG00005004736MSI110083.791ENSPLAG00000012431-9783.791Poecilia_latipinna
ENSEASG00005004736MSI110084.254ENSPLAG00000014025-10084.254Poecilia_latipinna
ENSEASG00005004736MSI110083.242ENSPMEG00000007025-9382.353Poecilia_mexicana
ENSEASG00005004736MSI110085.423ENSPMEG00000012796MSI110085.423Poecilia_mexicana
ENSEASG00005004736MSI19882.687ENSPREG00000021416-9584.404Poecilia_reticulata
ENSEASG00005004736MSI16085.854ENSPREG00000014574-10085.854Poecilia_reticulata
ENSEASG00005004736MSI110099.171ENSPPYG00000005027MSI110099.171Pongo_abelii
ENSEASG00005004736MSI19876.923ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSEASG00005004736MSI1100100.000ENSPCOG00000017341MSI1100100.000Propithecus_coquereli
ENSEASG00005004736MSI19882.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSEASG00005004736MSI110083.242ENSPNYG00000004379MSI110083.242Pundamilia_nyererei
ENSEASG00005004736MSI110083.978ENSPNYG00000002529-10083.978Pundamilia_nyererei
ENSEASG00005004736MSI110082.597ENSPNAG00000019337msi110082.597Pygocentrus_nattereri
ENSEASG00005004736MSI19499.678ENSRNOG00000001156Msi110099.678Rattus_norvegicus
ENSEASG00005004736MSI194100.000ENSRBIG00000036889MSI1100100.000Rhinopithecus_bieti
ENSEASG00005004736MSI19499.697ENSRROG00000041076MSI19399.697Rhinopithecus_roxellana
ENSEASG00005004736MSI198100.000ENSSBOG00000030259MSI198100.000Saimiri_boliviensis_boliviensis
ENSEASG00005004736MSI19487.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSEASG00005004736MSI19888.820ENSSFOG00015005350MSI110088.820Scleropages_formosus
ENSEASG00005004736MSI19886.842ENSSFOG00015014964-9586.842Scleropages_formosus
ENSEASG00005004736MSI19485.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSEASG00005004736MSI19886.774ENSSMAG00000018824MSI19786.774Scophthalmus_maximus
ENSEASG00005004736MSI110084.254ENSSDUG00000001027MSI110084.254Seriola_dumerili
ENSEASG00005004736MSI19885.897ENSSDUG00000022697-9787.220Seriola_dumerili
ENSEASG00005004736MSI110085.423ENSSLDG00000016832MSI110085.423Seriola_lalandi_dorsalis
ENSEASG00005004736MSI19885.897ENSSLDG00000018706-9787.220Seriola_lalandi_dorsalis
ENSEASG00005004736MSI110095.028ENSSPUG00000015741MSI110095.028Sphenodon_punctatus
ENSEASG00005004736MSI16075.122ENSSPAG00000014085-10075.122Stegastes_partitus
ENSEASG00005004736MSI19888.235ENSSPAG00000013098-10086.217Stegastes_partitus
ENSEASG00005004736MSI15574.375ENSSPAG00000015573zgc:1107968274.375Stegastes_partitus
ENSEASG00005004736MSI110099.724ENSSSCG00000029365MSI110099.724Sus_scrofa
ENSEASG00005004736MSI19896.784ENSTGUG00000009534MSI110096.784Taeniopygia_guttata
ENSEASG00005004736MSI18180.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSEASG00005004736MSI15177.320ENSTRUG00000021586-9977.320Takifugu_rubripes
ENSEASG00005004736MSI19480.645ENSTRUG00000015636-7980.645Takifugu_rubripes
ENSEASG00005004736MSI110079.178ENSTNIG00000011469MSI110079.178Tetraodon_nigroviridis
ENSEASG00005004736MSI19863.158ENSTNIG00000019814-9963.158Tetraodon_nigroviridis
ENSEASG00005004736MSI19489.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSEASG00005004736MSI19881.287ENSTTRG00000005663MSI110081.287Tursiops_truncatus
ENSEASG00005004736MSI165100.000ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSEASG00005004736MSI19493.811ENSUMAG00000006176MSI19093.811Ursus_maritimus
ENSEASG00005004736MSI19899.099ENSVVUG00000020993MSI110099.099Vulpes_vulpes
ENSEASG00005004736MSI110091.209ENSXETG00000012216msi110091.257Xenopus_tropicalis
ENSEASG00005004736MSI19476.161ENSXCOG00000017605MSI18976.161Xiphophorus_couchianus
ENSEASG00005004736MSI19887.616ENSXMAG00000018237-10083.516Xiphophorus_maculatus
ENSEASG00005004736MSI110084.254ENSXMAG00000027103MSI110078.000Xiphophorus_maculatus

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