EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005005306 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 146897 bases
Position: chrPSZQ01007541.1:2097729-2244625
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005007291	Ago_hook	PF10427.9	1.5e-19	1	1
ENSEASP00005007283	Ago_hook	PF10427.9	1.7e-19	1	1
ENSEASP00005007286	Ago_hook	PF10427.9	1.8e-19	1	1
ENSEASP00005007278	Ago_hook	PF10427.9	2e-19	1	1
ENSEASP00005007294	Ago_hook	PF10427.9	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005007949	TNRC6B-203	5403	-	ENSEASP00005007286	1800 (aa)	-	-
ENSEAST00005007959	TNRC6B-205	5160	-	ENSEASP00005007294	1719 (aa)	-	-
ENSEAST00005007941	TNRC6B-201	5352	-	ENSEASP00005007278	1783 (aa)	-	-
ENSEAST00005007946	TNRC6B-202	5394	-	ENSEASP00005007283	1797 (aa)	-	-
ENSEAST00005007954	TNRC6B-204	5319	-	ENSEASP00005007291	1772 (aa)	-	-

Gene Model

Click here to download ENSEASG00005005306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005005306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005005306	TNRC6B	72	37.517	ENSEASG00005004799	TNRC6C	93	35.134
ENSEASG00005005306	TNRC6B	99	37.883	ENSEASG00005017693	TNRC6A	98	41.480

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005005306	TNRC6B	99	96.266	ENSG00000100354	TNRC6B	99	97.409	Homo_sapiens
ENSEASG00005005306	TNRC6B	99	93.243	ENSAMEG00000011025	TNRC6B	100	92.088	Ailuropoda_melanoleuca
ENSEASG00005005306	TNRC6B	98	88.267	ENSAPLG00000009347	TNRC6B	99	88.267	Anas_platyrhynchos
ENSEASG00005005306	TNRC6B	99	73.273	ENSACAG00000007281	TNRC6B	98	73.447	Anolis_carolinensis
ENSEASG00005005306	TNRC6B	98	97.361	ENSANAG00000035042	TNRC6B	99	97.291	Aotus_nancymaae
ENSEASG00005005306	TNRC6B	82	48.069	ENSAMXG00000008707	tnrc6b	82	46.968	Astyanax_mexicanus
ENSEASG00005005306	TNRC6B	99	96.035	ENSBTAG00000021076	TNRC6B	99	96.571	Bos_taurus
ENSEASG00005005306	TNRC6B	99	96.093	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSEASG00005005306	TNRC6B	99	97.551	ENSCAFG00000001255	TNRC6B	99	97.551	Canis_familiaris
ENSEASG00005005306	TNRC6B	99	98.772	ENSCAFG00020002189	TNRC6B	99	98.772	Canis_lupus_dingo
ENSEASG00005005306	TNRC6B	99	96.823	ENSCHIG00000003491	TNRC6B	100	96.823	Capra_hircus
ENSEASG00005005306	TNRC6B	99	96.804	ENSTSYG00000011836	TNRC6B	100	96.143	Carlito_syrichta
ENSEASG00005005306	TNRC6B	100	96.241	ENSCPOG00000005705	TNRC6B	100	96.241	Cavia_porcellus
ENSEASG00005005306	TNRC6B	98	96.105	ENSCCAG00000019912	TNRC6B	99	95.630	Cebus_capucinus
ENSEASG00005005306	TNRC6B	98	96.958	ENSCATG00000029291	TNRC6B	99	96.958	Cercocebus_atys
ENSEASG00005005306	TNRC6B	100	96.790	ENSCLAG00000016942	TNRC6B	100	96.790	Chinchilla_lanigera
ENSEASG00005005306	TNRC6B	99	92.637	ENSCSAG00000006021	TNRC6B	99	92.708	Chlorocebus_sabaeus
ENSEASG00005005306	TNRC6B	92	86.234	ENSCPBG00000022932	TNRC6B	100	85.242	Chrysemys_picta_bellii
ENSEASG00005005306	TNRC6B	99	96.575	ENSCANG00000030776	TNRC6B	99	96.706	Colobus_angolensis_palliatus
ENSEASG00005005306	TNRC6B	97	94.885	ENSCGRG00001020166	Tnrc6b	99	95.208	Cricetulus_griseus_chok1gshd
ENSEASG00005005306	TNRC6B	100	94.870	ENSCGRG00000016696	Tnrc6b	99	95.243	Cricetulus_griseus_crigri
ENSEASG00005005306	TNRC6B	100	95.652	ENSDNOG00000012744	TNRC6B	100	96.267	Dasypus_novemcinctus
ENSEASG00005005306	TNRC6B	100	96.135	ENSDORG00000003386	Tnrc6b	100	96.135	Dipodomys_ordii
ENSEASG00005005306	TNRC6B	99	88.000	ENSETEG00000006570	TNRC6B	99	87.558	Echinops_telfairi
ENSEASG00005005306	TNRC6B	100	98.843	ENSECAG00000009759	TNRC6B	100	100.000	Equus_caballus
ENSEASG00005005306	TNRC6B	59	98.230	ENSEEUG00000008690	-	60	97.802	Erinaceus_europaeus
ENSEASG00005005306	TNRC6B	100	97.526	ENSFCAG00000004791	TNRC6B	100	97.526	Felis_catus
ENSEASG00005005306	TNRC6B	96	88.935	ENSFALG00000012195	TNRC6B	100	88.699	Ficedula_albicollis
ENSEASG00005005306	TNRC6B	100	96.739	ENSFDAG00000021368	TNRC6B	100	96.739	Fukomys_damarensis
ENSEASG00005005306	TNRC6B	99	89.117	ENSGALG00000012050	TNRC6B	98	88.014	Gallus_gallus
ENSEASG00005005306	TNRC6B	99	88.359	ENSGAGG00000025188	TNRC6B	98	87.964	Gopherus_agassizii
ENSEASG00005005306	TNRC6B	98	97.303	ENSGGOG00000008444	TNRC6B	99	97.409	Gorilla_gorilla
ENSEASG00005005306	TNRC6B	100	96.454	ENSHGLG00000009306	TNRC6B	100	96.454	Heterocephalus_glaber_female
ENSEASG00005005306	TNRC6B	100	96.135	ENSHGLG00100018108	TNRC6B	100	96.976	Heterocephalus_glaber_male
ENSEASG00005005306	TNRC6B	80	43.376	ENSIPUG00000001515	tnrc6b	96	46.370	Ictalurus_punctatus
ENSEASG00005005306	TNRC6B	100	96.632	ENSSTOG00000008927	TNRC6B	100	96.632	Ictidomys_tridecemlineatus
ENSEASG00005005306	TNRC6B	99	95.647	ENSJJAG00000015779	Tnrc6b	99	95.752	Jaculus_jaculus
ENSEASG00005005306	TNRC6B	99	61.031	ENSLACG00000000628	-	99	60.953	Latimeria_chalumnae
ENSEASG00005005306	TNRC6B	78	96.594	ENSLAFG00000014473	TNRC6B	100	96.054	Loxodonta_africana
ENSEASG00005005306	TNRC6B	99	96.241	ENSMFAG00000003862	TNRC6B	99	96.961	Macaca_fascicularis
ENSEASG00005005306	TNRC6B	100	96.200	ENSMMUG00000021345	TNRC6B	100	96.737	Macaca_mulatta
ENSEASG00005005306	TNRC6B	99	95.871	ENSMNEG00000042745	TNRC6B	100	96.606	Macaca_nemestrina
ENSEASG00005005306	TNRC6B	98	96.961	ENSMLEG00000041780	TNRC6B	99	97.176	Mandrillus_leucophaeus
ENSEASG00005005306	TNRC6B	99	83.233	ENSMGAG00000012333	TNRC6B	99	83.188	Meleagris_gallopavo
ENSEASG00005005306	TNRC6B	99	94.752	ENSMAUG00000016123	Tnrc6b	98	95.187	Mesocricetus_auratus
ENSEASG00005005306	TNRC6B	99	96.467	ENSMICG00000014056	TNRC6B	100	96.833	Microcebus_murinus
ENSEASG00005005306	TNRC6B	96	95.500	ENSMOCG00000020334	Tnrc6b	99	95.500	Microtus_ochrogaster
ENSEASG00005005306	TNRC6B	99	94.928	MGP_CAROLIEiJ_G0020043	Tnrc6b	99	95.142	Mus_caroli
ENSEASG00005005306	TNRC6B	99	94.872	ENSMUSG00000047888	Tnrc6b	99	95.087	Mus_musculus
ENSEASG00005005306	TNRC6B	99	94.534	MGP_PahariEiJ_G0020045	Tnrc6b	99	94.749	Mus_pahari
ENSEASG00005005306	TNRC6B	99	95.095	MGP_SPRETEiJ_G0020941	Tnrc6b	99	95.310	Mus_spretus
ENSEASG00005005306	TNRC6B	97	98.667	ENSMPUG00000016442	TNRC6B	99	88.889	Mustela_putorius_furo
ENSEASG00005005306	TNRC6B	99	91.338	ENSMLUG00000008765	TNRC6B	99	92.055	Myotis_lucifugus
ENSEASG00005005306	TNRC6B	99	95.434	ENSNGAG00000021294	Tnrc6b	99	95.371	Nannospalax_galili
ENSEASG00005005306	TNRC6B	88	95.413	ENSNLEG00000015311	TNRC6B	99	97.644	Nomascus_leucogenys
ENSEASG00005005306	TNRC6B	89	93.873	ENSOPRG00000012054	TNRC6B	88	94.100	Ochotona_princeps
ENSEASG00005005306	TNRC6B	100	96.582	ENSODEG00000013146	TNRC6B	100	96.582	Octodon_degus
ENSEASG00005005306	TNRC6B	51	47.533	ENSONIG00000019679	-	99	41.874	Oreochromis_niloticus
ENSEASG00005005306	TNRC6B	99	95.725	ENSOCUG00000016128	TNRC6B	99	95.817	Oryctolagus_cuniculus
ENSEASG00005005306	TNRC6B	99	91.421	ENSOGAG00000011096	TNRC6B	99	90.998	Otolemur_garnettii
ENSEASG00005005306	TNRC6B	100	95.888	ENSOARG00000017238	TNRC6B	100	95.888	Ovis_aries
ENSEASG00005005306	TNRC6B	99	96.266	ENSPPAG00000028514	TNRC6B	99	97.754	Pan_paniscus
ENSEASG00005005306	TNRC6B	99	97.375	ENSPPRG00000017741	TNRC6B	99	98.465	Panthera_pardus
ENSEASG00005005306	TNRC6B	100	93.337	ENSPTIG00000022064	TNRC6B	99	93.511	Panthera_tigris_altaica
ENSEASG00005005306	TNRC6B	98	97.303	ENSPTRG00000047826	TNRC6B	99	97.409	Pan_troglodytes
ENSEASG00005005306	TNRC6B	98	91.469	ENSPANG00000009271	TNRC6B	99	91.307	Papio_anubis
ENSEASG00005005306	TNRC6B	99	88.409	ENSPSIG00000005318	TNRC6B	99	88.014	Pelodiscus_sinensis
ENSEASG00005005306	TNRC6B	99	94.713	ENSPEMG00000011403	Tnrc6b	99	94.872	Peromyscus_maniculatus_bairdii
ENSEASG00005005306	TNRC6B	99	87.080	ENSPCIG00000020347	TNRC6B	100	86.359	Phascolarctos_cinereus
ENSEASG00005005306	TNRC6B	95	39.206	ENSPFOG00000006033	-	99	39.789	Poecilia_formosa
ENSEASG00005005306	TNRC6B	64	46.095	ENSPLAG00000001418	-	87	47.078	Poecilia_latipinna
ENSEASG00005005306	TNRC6B	72	60.390	ENSPMEG00000006371	-	94	54.739	Poecilia_mexicana
ENSEASG00005005306	TNRC6B	99	96.102	ENSPPYG00000011849	TNRC6B	99	96.102	Pongo_abelii
ENSEASG00005005306	TNRC6B	75	94.239	ENSPCAG00000008739	TNRC6B	76	92.628	Procavia_capensis
ENSEASG00005005306	TNRC6B	99	96.971	ENSPCOG00000020790	TNRC6B	99	97.412	Propithecus_coquereli
ENSEASG00005005306	TNRC6B	93	95.971	ENSPVAG00000004975	TNRC6B	94	95.971	Pteropus_vampyrus
ENSEASG00005005306	TNRC6B	75	44.034	ENSPNAG00000011713	tnrc6b	81	43.611	Pygocentrus_nattereri
ENSEASG00005005306	TNRC6B	99	94.506	ENSRNOG00000024907	Tnrc6b	99	94.553	Rattus_norvegicus
ENSEASG00005005306	TNRC6B	99	95.743	ENSRBIG00000035576	TNRC6B	100	96.941	Rhinopithecus_bieti
ENSEASG00005005306	TNRC6B	99	96.027	ENSRROG00000031135	TNRC6B	100	96.493	Rhinopithecus_roxellana
ENSEASG00005005306	TNRC6B	99	96.268	ENSSBOG00000029743	TNRC6B	100	96.268	Saimiri_boliviensis_boliviensis
ENSEASG00005005306	TNRC6B	99	82.039	ENSSHAG00000009692	TNRC6B	99	81.477	Sarcophilus_harrisii
ENSEASG00005005306	TNRC6B	72	85.839	ENSSARG00000007971	-	73	85.593	Sorex_araneus
ENSEASG00005005306	TNRC6B	92	80.676	ENSSPUG00000010801	TNRC6B	100	81.743	Sphenodon_punctatus
ENSEASG00005005306	TNRC6B	100	96.915	ENSSSCG00000000078	TNRC6B	99	97.357	Sus_scrofa
ENSEASG00005005306	TNRC6B	92	88.209	ENSTGUG00000010138	-	99	86.840	Taeniopygia_guttata
ENSEASG00005005306	TNRC6B	99	94.994	ENSTTRG00000011465	TNRC6B	98	94.183	Tursiops_truncatus
ENSEASG00005005306	TNRC6B	100	97.336	ENSUAMG00000007174	TNRC6B	100	97.336	Ursus_americanus
ENSEASG00005005306	TNRC6B	99	97.510	ENSUMAG00000014336	TNRC6B	100	98.701	Ursus_maritimus
ENSEASG00005005306	TNRC6B	68	92.000	ENSVPAG00000001467	TNRC6B	74	91.511	Vicugna_pacos
ENSEASG00005005306	TNRC6B	100	97.687	ENSVVUG00000007064	TNRC6B	100	98.216	Vulpes_vulpes