EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005005484 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 15277 bases
Position: chrPSZQ01005155.1:1808654-1823930
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005007499	HVSL	PF09749.9	3.5e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005008182	USB1-201	1523	-	ENSEASP00005007499	265 (aa)	-	-

Gene Model

Click here to download ENSEASG00005005484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005005484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005005484	USB1	100	85.660	ENSG00000103005	USB1	100	88.318	Homo_sapiens
ENSEASG00005005484	USB1	98	47.670	ENSAPOG00000011942	usb1	99	47.312	Acanthochromis_polyacanthus
ENSEASG00005005484	USB1	100	86.617	ENSAMEG00000017205	USB1	100	86.617	Ailuropoda_melanoleuca
ENSEASG00005005484	USB1	85	53.982	ENSACIG00000012234	usb1	99	50.365	Amphilophus_citrinellus
ENSEASG00005005484	USB1	86	53.304	ENSAOCG00000014831	usb1	99	48.399	Amphiprion_ocellaris
ENSEASG00005005484	USB1	86	53.744	ENSAPEG00000000296	usb1	99	48.754	Amphiprion_percula
ENSEASG00005005484	USB1	87	52.814	ENSATEG00000009348	usb1	99	48.929	Anabas_testudineus
ENSEASG00005005484	USB1	85	70.354	ENSAPLG00000002756	USB1	100	70.354	Anas_platyrhynchos
ENSEASG00005005484	USB1	86	64.192	ENSACAG00000015481	USB1	100	64.192	Anolis_carolinensis
ENSEASG00005005484	USB1	100	84.528	ENSANAG00000035640	USB1	100	84.528	Aotus_nancymaae
ENSEASG00005005484	USB1	85	53.571	ENSACLG00000020586	usb1	99	47.857	Astatotilapia_calliptera
ENSEASG00005005484	USB1	85	52.000	ENSAMXG00000040146	usb1	75	52.000	Astyanax_mexicanus
ENSEASG00005005484	USB1	100	87.547	ENSBTAG00000015758	USB1	100	87.547	Bos_taurus
ENSEASG00005005484	USB1	100	86.792	ENSCJAG00000011733	USB1	100	86.792	Callithrix_jacchus
ENSEASG00005005484	USB1	99	82.353	ENSCAFG00000008556	USB1	73	83.088	Canis_familiaris
ENSEASG00005005484	USB1	99	82.463	ENSCAFG00020009263	USB1	99	82.463	Canis_lupus_dingo
ENSEASG00005005484	USB1	100	86.792	ENSCHIG00000024290	USB1	100	86.792	Capra_hircus
ENSEASG00005005484	USB1	100	86.792	ENSTSYG00000006997	USB1	100	86.792	Carlito_syrichta
ENSEASG00005005484	USB1	88	71.983	ENSCAPG00000009057	USB1	100	71.983	Cavia_aperea
ENSEASG00005005484	USB1	100	83.209	ENSCPOG00000014325	USB1	100	83.209	Cavia_porcellus
ENSEASG00005005484	USB1	100	85.660	ENSCCAG00000022132	USB1	100	85.660	Cebus_capucinus
ENSEASG00005005484	USB1	100	86.792	ENSCATG00000032174	USB1	100	86.792	Cercocebus_atys
ENSEASG00005005484	USB1	66	88.636	ENSCLAG00000007363	USB1	100	88.636	Chinchilla_lanigera
ENSEASG00005005484	USB1	100	87.170	ENSCSAG00000004783	USB1	100	87.170	Chlorocebus_sabaeus
ENSEASG00005005484	USB1	100	61.511	ENSCPBG00000026943	USB1	100	63.441	Chrysemys_picta_bellii
ENSEASG00005005484	USB1	83	32.301	ENSCSAVG00000000894	-	81	32.301	Ciona_savignyi
ENSEASG00005005484	USB1	100	85.660	ENSCANG00000037135	USB1	100	85.660	Colobus_angolensis_palliatus
ENSEASG00005005484	USB1	100	82.090	ENSCGRG00001011243	USB1	100	82.090	Cricetulus_griseus_chok1gshd
ENSEASG00005005484	USB1	100	82.090	ENSCGRG00000013252	USB1	100	82.090	Cricetulus_griseus_crigri
ENSEASG00005005484	USB1	98	47.636	ENSCSEG00000013881	usb1	99	47.636	Cynoglossus_semilaevis
ENSEASG00005005484	USB1	85	50.000	ENSCVAG00000009252	usb1	97	50.439	Cyprinodon_variegatus
ENSEASG00005005484	USB1	94	48.193	ENSDARG00000003841	usb1	99	46.545	Danio_rerio
ENSEASG00005005484	USB1	100	81.887	ENSDORG00000001888	Usb1	100	81.887	Dipodomys_ordii
ENSEASG00005005484	USB1	97	37.313	FBgn0037713	CG16790	97	37.313	Drosophila_melanogaster
ENSEASG00005005484	USB1	100	71.536	ENSETEG00000019682	USB1	100	71.536	Echinops_telfairi
ENSEASG00005005484	USB1	84	53.153	ENSEBUG00000005889	usb1	78	53.153	Eptatretus_burgeri
ENSEASG00005005484	USB1	100	98.491	ENSECAG00000019493	USB1	91	98.491	Equus_caballus
ENSEASG00005005484	USB1	66	80.114	ENSEEUG00000000154	USB1	100	62.264	Erinaceus_europaeus
ENSEASG00005005484	USB1	86	49.123	ENSELUG00000010974	usb1	99	46.182	Esox_lucius
ENSEASG00005005484	USB1	100	88.390	ENSFCAG00000002693	USB1	100	88.390	Felis_catus
ENSEASG00005005484	USB1	85	66.071	ENSFALG00000006876	USB1	99	61.798	Ficedula_albicollis
ENSEASG00005005484	USB1	100	85.768	ENSFDAG00000010052	USB1	100	85.768	Fukomys_damarensis
ENSEASG00005005484	USB1	86	48.361	ENSFHEG00000012334	usb1	97	48.770	Fundulus_heteroclitus
ENSEASG00005005484	USB1	84	52.018	ENSGMOG00000004228	usb1	99	52.018	Gadus_morhua
ENSEASG00005005484	USB1	84	69.196	ENSGALG00000035604	USB1	100	66.541	Gallus_gallus
ENSEASG00005005484	USB1	98	47.636	ENSGAFG00000021890	usb1	99	47.636	Gambusia_affinis
ENSEASG00005005484	USB1	85	52.232	ENSGACG00000003257	usb1	99	48.551	Gasterosteus_aculeatus
ENSEASG00005005484	USB1	100	63.869	ENSGAGG00000022572	USB1	100	63.869	Gopherus_agassizii
ENSEASG00005005484	USB1	100	86.415	ENSGGOG00000017147	USB1	100	86.415	Gorilla_gorilla
ENSEASG00005005484	USB1	86	53.744	ENSHBUG00000009823	usb1	99	48.746	Haplochromis_burtoni
ENSEASG00005005484	USB1	100	85.393	ENSHGLG00000016078	USB1	98	85.393	Heterocephalus_glaber_female
ENSEASG00005005484	USB1	100	85.393	ENSHGLG00100005562	USB1	98	85.393	Heterocephalus_glaber_male
ENSEASG00005005484	USB1	82	54.167	ENSHCOG00000015633	usb1	99	51.737	Hippocampus_comes
ENSEASG00005005484	USB1	85	54.464	ENSIPUG00000008601	usb1	78	54.464	Ictalurus_punctatus
ENSEASG00005005484	USB1	100	84.249	ENSSTOG00000007548	USB1	100	84.982	Ictidomys_tridecemlineatus
ENSEASG00005005484	USB1	100	86.891	ENSJJAG00000021859	Usb1	100	86.891	Jaculus_jaculus
ENSEASG00005005484	USB1	86	51.982	ENSKMAG00000007200	usb1	99	47.687	Kryptolebias_marmoratus
ENSEASG00005005484	USB1	75	52.020	ENSLBEG00000008452	usb1	64	52.632	Labrus_bergylta
ENSEASG00005005484	USB1	77	62.500	ENSLACG00000000105	USB1	91	55.849	Latimeria_chalumnae
ENSEASG00005005484	USB1	89	55.372	ENSLOCG00000000465	usb1	99	51.408	Lepisosteus_oculatus
ENSEASG00005005484	USB1	100	67.037	ENSLAFG00000002267	USB1	100	67.407	Loxodonta_africana
ENSEASG00005005484	USB1	100	87.170	ENSMFAG00000003926	USB1	100	87.170	Macaca_fascicularis
ENSEASG00005005484	USB1	100	87.170	ENSMMUG00000022669	USB1	100	87.170	Macaca_mulatta
ENSEASG00005005484	USB1	100	86.792	ENSMNEG00000042487	USB1	100	86.792	Macaca_nemestrina
ENSEASG00005005484	USB1	100	87.170	ENSMLEG00000028756	USB1	100	87.170	Mandrillus_leucophaeus
ENSEASG00005005484	USB1	98	48.921	ENSMAMG00000015092	usb1	99	48.921	Mastacembelus_armatus
ENSEASG00005005484	USB1	85	53.571	ENSMZEG00005010008	usb1	99	48.387	Maylandia_zebra
ENSEASG00005005484	USB1	100	82.772	ENSMAUG00000007832	Usb1	100	82.772	Mesocricetus_auratus
ENSEASG00005005484	USB1	100	87.547	ENSMICG00000004900	USB1	100	87.547	Microcebus_murinus
ENSEASG00005005484	USB1	100	82.022	ENSMOCG00000022647	Usb1	100	82.022	Microtus_ochrogaster
ENSEASG00005005484	USB1	86	53.509	ENSMMOG00000000490	usb1	99	51.341	Mola_mola
ENSEASG00005005484	USB1	100	65.926	ENSMODG00000014067	USB1	100	67.537	Monodelphis_domestica
ENSEASG00005005484	USB1	95	50.598	ENSMALG00000005930	usb1	99	49.110	Monopterus_albus
ENSEASG00005005484	USB1	100	83.146	MGP_CAROLIEiJ_G0031421	Usb1	100	85.841	Mus_caroli
ENSEASG00005005484	USB1	100	83.146	ENSMUSG00000031792	Usb1	100	86.726	Mus_musculus
ENSEASG00005005484	USB1	100	82.772	MGP_PahariEiJ_G0023019	Usb1	100	85.470	Mus_pahari
ENSEASG00005005484	USB1	100	82.397	MGP_SPRETEiJ_G0032540	Usb1	100	82.397	Mus_spretus
ENSEASG00005005484	USB1	100	85.502	ENSMPUG00000004684	USB1	96	85.502	Mustela_putorius_furo
ENSEASG00005005484	USB1	87	91.775	ENSMLUG00000007400	USB1	100	91.775	Myotis_lucifugus
ENSEASG00005005484	USB1	100	84.387	ENSNGAG00000009703	Usb1	100	84.758	Nannospalax_galili
ENSEASG00005005484	USB1	88	47.639	ENSNBRG00000008747	usb1	99	52.336	Neolamprologus_brichardi
ENSEASG00005005484	USB1	94	85.600	ENSNLEG00000003340	USB1	100	85.600	Nomascus_leucogenys
ENSEASG00005005484	USB1	56	60.645	ENSMEUG00000003328	-	100	63.462	Notamacropus_eugenii
ENSEASG00005005484	USB1	63	87.879	ENSOPRG00000011803	USB1	72	87.879	Ochotona_princeps
ENSEASG00005005484	USB1	100	82.397	ENSODEG00000016214	USB1	100	82.397	Octodon_degus
ENSEASG00005005484	USB1	98	48.921	ENSONIG00000011063	usb1	99	48.921	Oreochromis_niloticus
ENSEASG00005005484	USB1	85	74.222	ENSOANG00000012118	USB1	94	74.222	Ornithorhynchus_anatinus
ENSEASG00005005484	USB1	85	50.893	ENSORLG00000012479	usb1	99	47.059	Oryzias_latipes
ENSEASG00005005484	USB1	85	50.893	ENSORLG00020018671	usb1	99	46.296	Oryzias_latipes_hni
ENSEASG00005005484	USB1	89	47.755	ENSORLG00015009679	usb1	99	46.667	Oryzias_latipes_hsok
ENSEASG00005005484	USB1	85	51.339	ENSOMEG00000012930	usb1	99	46.909	Oryzias_melastigma
ENSEASG00005005484	USB1	100	80.377	ENSOGAG00000003273	USB1	100	80.377	Otolemur_garnettii
ENSEASG00005005484	USB1	91	88.382	ENSOARG00000001107	USB1	92	88.382	Ovis_aries
ENSEASG00005005484	USB1	100	86.038	ENSPPAG00000042137	USB1	100	86.038	Pan_paniscus
ENSEASG00005005484	USB1	100	87.640	ENSPPRG00000024797	USB1	100	87.640	Panthera_pardus
ENSEASG00005005484	USB1	100	87.640	ENSPTIG00000007506	USB1	100	87.640	Panthera_tigris_altaica
ENSEASG00005005484	USB1	100	79.623	ENSPTRG00000008172	USB1	100	89.252	Pan_troglodytes
ENSEASG00005005484	USB1	100	87.170	ENSPANG00000025138	USB1	100	87.170	Papio_anubis
ENSEASG00005005484	USB1	84	55.605	ENSPKIG00000015109	usb1	99	47.458	Paramormyrops_kingsleyae
ENSEASG00005005484	USB1	85	53.778	ENSPSIG00000004305	USB1	100	53.778	Pelodiscus_sinensis
ENSEASG00005005484	USB1	85	50.667	ENSPMGG00000017725	usb1	98	48.263	Periophthalmus_magnuspinnatus
ENSEASG00005005484	USB1	100	81.250	ENSPEMG00000016183	Usb1	100	81.618	Peromyscus_maniculatus_bairdii
ENSEASG00005005484	USB1	88	52.119	ENSPMAG00000000462	usb1	99	52.119	Petromyzon_marinus
ENSEASG00005005484	USB1	98	47.826	ENSPFOG00000011130	usb1	99	47.826	Poecilia_formosa
ENSEASG00005005484	USB1	98	47.826	ENSPLAG00000009820	usb1	99	47.826	Poecilia_latipinna
ENSEASG00005005484	USB1	98	47.826	ENSPMEG00000006402	usb1	99	47.826	Poecilia_mexicana
ENSEASG00005005484	USB1	86	47.541	ENSPREG00000001047	usb1	98	48.361	Poecilia_reticulata
ENSEASG00005005484	USB1	95	82.143	ENSPPYG00000007401	USB1	100	82.143	Pongo_abelii
ENSEASG00005005484	USB1	100	87.170	ENSPCOG00000022612	USB1	100	87.170	Propithecus_coquereli
ENSEASG00005005484	USB1	100	84.151	ENSPVAG00000004613	USB1	100	84.151	Pteropus_vampyrus
ENSEASG00005005484	USB1	98	48.302	ENSPNYG00000022262	usb1	99	49.462	Pundamilia_nyererei
ENSEASG00005005484	USB1	85	52.679	ENSPNAG00000011736	usb1	99	45.392	Pygocentrus_nattereri
ENSEASG00005005484	USB1	100	82.022	ENSRNOG00000013216	Usb1	100	82.022	Rattus_norvegicus
ENSEASG00005005484	USB1	100	80.755	ENSRBIG00000044466	USB1	100	90.187	Rhinopithecus_bieti
ENSEASG00005005484	USB1	100	86.792	ENSRROG00000029211	USB1	100	86.792	Rhinopithecus_roxellana
ENSEASG00005005484	USB1	100	86.038	ENSSBOG00000029362	USB1	100	86.038	Saimiri_boliviensis_boliviensis
ENSEASG00005005484	USB1	83	73.516	ENSSHAG00000006993	USB1	100	69.170	Sarcophilus_harrisii
ENSEASG00005005484	USB1	87	57.576	ENSSFOG00015023663	usb1	73	57.576	Scleropages_formosus
ENSEASG00005005484	USB1	98	48.201	ENSSMAG00000015834	usb1	99	47.619	Scophthalmus_maximus
ENSEASG00005005484	USB1	85	54.867	ENSSDUG00000002949	usb1	99	50.368	Seriola_dumerili
ENSEASG00005005484	USB1	99	48.864	ENSSLDG00000014174	usb1	99	49.104	Seriola_lalandi_dorsalis
ENSEASG00005005484	USB1	81	66.822	ENSSPUG00000006741	USB1	100	66.822	Sphenodon_punctatus
ENSEASG00005005484	USB1	98	45.936	ENSSPAG00000007484	usb1	99	45.936	Stegastes_partitus
ENSEASG00005005484	USB1	100	86.245	ENSSSCG00000002807	USB1	100	86.245	Sus_scrofa
ENSEASG00005005484	USB1	80	67.925	ENSTGUG00000004792	USB1	99	61.887	Taeniopygia_guttata
ENSEASG00005005484	USB1	98	48.134	ENSTRUG00000021069	usb1	99	48.134	Takifugu_rubripes
ENSEASG00005005484	USB1	98	47.510	ENSTNIG00000000626	usb1	98	47.510	Tetraodon_nigroviridis
ENSEASG00005005484	USB1	88	59.914	ENSTBEG00000001507	USB1	100	59.914	Tupaia_belangeri
ENSEASG00005005484	USB1	58	90.833	ENSTTRG00000008429	-	58	90.833	Tursiops_truncatus
ENSEASG00005005484	USB1	100	86.617	ENSUAMG00000016823	USB1	100	86.617	Ursus_americanus
ENSEASG00005005484	USB1	81	88.318	ENSUMAG00000021369	USB1	100	88.318	Ursus_maritimus
ENSEASG00005005484	USB1	77	61.576	ENSVPAG00000009834	-	100	61.576	Vicugna_pacos
ENSEASG00005005484	USB1	99	83.209	ENSVVUG00000023700	USB1	93	84.647	Vulpes_vulpes
ENSEASG00005005484	USB1	82	55.963	ENSXETG00000013795	usb1	99	53.462	Xenopus_tropicalis
ENSEASG00005005484	USB1	86	52.193	ENSXMAG00000024687	usb1	80	48.980	Xiphophorus_maculatus