EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005005824 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 4327 bases
Position: chrPSZQ01001389.1:19969535-19973861
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005008019	RRM_1	PF00076.22	1.1e-13	1	1
ENSEASP00005008018	RRM_1	PF00076.22	1.6e-13	1	1
ENSEASP00005008019	FYTT	PF07078.11	0.00012	1	1
ENSEASP00005008018	FYTT	PF07078.11	0.00044	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005008752	ALYREF-202	660	-	ENSEASP00005008019	219 (aa)	-	-
ENSEAST00005008750	ALYREF-201	813	-	ENSEASP00005008018	270 (aa)	-	-

Gene Model

Click here to download ENSEASG00005005824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005005824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005005824	ALYREF	98	97.348	ENSG00000183684	ALYREF	100	97.348	Homo_sapiens
ENSEASG00005005824	ALYREF	95	67.986	ENSAPOG00000018455	ALYREF	100	71.942	Acanthochromis_polyacanthus
ENSEASG00005005824	ALYREF	76	87.619	ENSAMEG00000017463	ALYREF	74	92.935	Ailuropoda_melanoleuca
ENSEASG00005005824	ALYREF	95	75.573	ENSACAG00000010526	ALYREF	100	73.664	Anolis_carolinensis
ENSEASG00005005824	ALYREF	98	81.818	ENSANAG00000028229	-	80	82.955	Aotus_nancymaae
ENSEASG00005005824	ALYREF	66	94.915	ENSANAG00000022638	-	75	94.915	Aotus_nancymaae
ENSEASG00005005824	ALYREF	95	99.611	ENSBTAG00000008498	ALYREF	100	99.611	Bos_taurus
ENSEASG00005005824	ALYREF	98	96.212	ENSCJAG00000039942	ALYREF	100	96.212	Callithrix_jacchus
ENSEASG00005005824	ALYREF	95	98.833	ENSCAFG00000005877	ALYREF	100	98.833	Canis_familiaris
ENSEASG00005005824	ALYREF	95	98.833	ENSCAFG00020009815	ALYREF	100	98.833	Canis_lupus_dingo
ENSEASG00005005824	ALYREF	95	98.837	ENSCHIG00000017396	ALYREF	97	98.837	Capra_hircus
ENSEASG00005005824	ALYREF	83	82.684	ENSTSYG00000002272	ALYREF	69	97.714	Carlito_syrichta
ENSEASG00005005824	ALYREF	50	97.015	ENSCAPG00000014727	-	100	97.015	Cavia_aperea
ENSEASG00005005824	ALYREF	95	97.665	ENSCPOG00000013710	ALYREF	100	97.665	Cavia_porcellus
ENSEASG00005005824	ALYREF	98	96.591	ENSCCAG00000020578	-	100	96.591	Cebus_capucinus
ENSEASG00005005824	ALYREF	95	74.708	ENSCCAG00000030237	-	99	75.229	Cebus_capucinus
ENSEASG00005005824	ALYREF	98	96.970	ENSCATG00000033169	ALYREF	100	96.970	Cercocebus_atys
ENSEASG00005005824	ALYREF	95	89.105	ENSCLAG00000015026	ALYREF	100	89.105	Chinchilla_lanigera
ENSEASG00005005824	ALYREF	98	96.970	ENSCSAG00000002216	ALYREF	100	96.970	Chlorocebus_sabaeus
ENSEASG00005005824	ALYREF	67	93.923	ENSCANG00000034056	ALYREF	89	87.571	Colobus_angolensis_palliatus
ENSEASG00005005824	ALYREF	95	94.163	ENSCGRG00001018191	-	100	91.829	Cricetulus_griseus_chok1gshd
ENSEASG00005005824	ALYREF	71	91.099	ENSCGRG00000015871	-	90	86.022	Cricetulus_griseus_crigri
ENSEASG00005005824	ALYREF	74	54.054	ENSCSEG00000015438	-	98	57.838	Cynoglossus_semilaevis
ENSEASG00005005824	ALYREF	66	96.629	ENSDNOG00000002563	ALYREF	75	96.629	Dasypus_novemcinctus
ENSEASG00005005824	ALYREF	83	82.667	ENSDORG00000025849	-	73	96.111	Dipodomys_ordii
ENSEASG00005005824	ALYREF	66	95.506	ENSETEG00000016596	ALYREF	100	94.382	Echinops_telfairi
ENSEASG00005005824	ALYREF	100	100.000	ENSECAG00000018754	ALYREF	100	100.000	Equus_caballus
ENSEASG00005005824	ALYREF	64	97.674	ENSEEUG00000010164	ALYREF	100	97.674	Erinaceus_europaeus
ENSEASG00005005824	ALYREF	97	99.237	ENSFCAG00000022549	ALYREF	99	99.237	Felis_catus
ENSEASG00005005824	ALYREF	76	88.350	ENSFDAG00000001213	ALYREF	93	86.893	Fukomys_damarensis
ENSEASG00005005824	ALYREF	95	83.784	ENSGALG00000007237	ALYREF	100	83.398	Gallus_gallus
ENSEASG00005005824	ALYREF	95	70.189	ENSGACG00000013328	ALYREF	100	71.053	Gasterosteus_aculeatus
ENSEASG00005005824	ALYREF	95	83.206	ENSGAGG00000008536	ALYREF	100	82.061	Gopherus_agassizii
ENSEASG00005005824	ALYREF	98	97.348	ENSGGOG00000013935	ALYREF	100	97.348	Gorilla_gorilla
ENSEASG00005005824	ALYREF	95	96.498	ENSHGLG00000008293	ALYREF	100	96.498	Heterocephalus_glaber_female
ENSEASG00005005824	ALYREF	77	82.379	ENSHGLG00100006949	ALYREF	77	95.580	Heterocephalus_glaber_male
ENSEASG00005005824	ALYREF	95	68.165	ENSHCOG00000015046	ALYREF	100	69.485	Hippocampus_comes
ENSEASG00005005824	ALYREF	95	94.163	ENSJJAG00000004134	-	100	94.163	Jaculus_jaculus
ENSEASG00005005824	ALYREF	95	70.455	ENSLACG00000005694	ALYREF	100	71.212	Latimeria_chalumnae
ENSEASG00005005824	ALYREF	70	96.277	ENSLAFG00000003083	ALYREF	98	94.565	Loxodonta_africana
ENSEASG00005005824	ALYREF	98	94.318	ENSMFAG00000001394	ALYREF	100	94.318	Macaca_fascicularis
ENSEASG00005005824	ALYREF	98	96.970	ENSMMUG00000012884	ALYREF	100	96.970	Macaca_mulatta
ENSEASG00005005824	ALYREF	98	96.970	ENSMNEG00000043666	ALYREF	100	96.970	Macaca_nemestrina
ENSEASG00005005824	ALYREF	69	85.789	ENSMLEG00000043353	ALYREF	83	87.222	Mandrillus_leucophaeus
ENSEASG00005005824	ALYREF	95	79.377	ENSMAUG00000020552	-	100	74.319	Mesocricetus_auratus
ENSEASG00005005824	ALYREF	97	97.710	ENSMICG00000017403	ALYREF	99	97.710	Microcebus_murinus
ENSEASG00005005824	ALYREF	95	83.333	ENSMOCG00000016792	-	100	81.818	Microtus_ochrogaster
ENSEASG00005005824	ALYREF	95	95.720	ENSMODG00000003030	ALYREF	84	95.720	Monodelphis_domestica
ENSEASG00005005824	ALYREF	95	69.565	ENSMALG00000019408	ALYREF	100	71.273	Monopterus_albus
ENSEASG00005005824	ALYREF	90	79.911	MGP_CAROLIEiJ_G0014874	Alyref2	98	75.000	Mus_caroli
ENSEASG00005005824	ALYREF	95	96.887	MGP_CAROLIEiJ_G0017529	Alyref	100	96.887	Mus_caroli
ENSEASG00005005824	ALYREF	87	65.957	ENSMUSG00000112856	Gm4305	58	71.264	Mus_musculus
ENSEASG00005005824	ALYREF	87	64.831	ENSMUSG00000094314	Gm4301	77	59.031	Mus_musculus
ENSEASG00005005824	ALYREF	96	62.587	ENSMUSG00000097878	Gm8764	98	67.568	Mus_musculus
ENSEASG00005005824	ALYREF	96	62.587	ENSMUSG00000097427	Gm6763	98	67.568	Mus_musculus
ENSEASG00005005824	ALYREF	87	65.957	ENSMUSG00000096744	Gm4307	58	71.264	Mus_musculus
ENSEASG00005005824	ALYREF	96	62.587	ENSMUSG00000094144	Gm21312	100	54.225	Mus_musculus
ENSEASG00005005824	ALYREF	90	79.452	ENSMUSG00000060244	Alyref2	98	77.626	Mus_musculus
ENSEASG00005005824	ALYREF	95	61.278	ENSMUSG00000117091	AC153137.1	100	57.576	Mus_musculus
ENSEASG00005005824	ALYREF	96	62.587	ENSMUSG00000095022	Gm20765	100	54.225	Mus_musculus
ENSEASG00005005824	ALYREF	87	65.957	ENSMUSG00000112931	Gm4303	58	71.264	Mus_musculus
ENSEASG00005005824	ALYREF	95	96.887	ENSMUSG00000025134	Alyref	100	96.887	Mus_musculus
ENSEASG00005005824	ALYREF	87	64.831	ENSMUSG00000096640	Gm4312	77	59.031	Mus_musculus
ENSEASG00005005824	ALYREF	95	62.807	ENSMUSG00000097550	Gm21304	100	54.225	Mus_musculus
ENSEASG00005005824	ALYREF	95	62.807	ENSMUSG00000091779	Gm21293	100	54.225	Mus_musculus
ENSEASG00005005824	ALYREF	96	61.724	ENSMUSG00000090854	Gm4340	100	52.778	Mus_musculus
ENSEASG00005005824	ALYREF	87	66.102	ENSMUSG00000091101	Gm4302	57	71.264	Mus_musculus
ENSEASG00005005824	ALYREF	95	61.654	ENSMUSG00000086727	4931428L18Rik	100	58.333	Mus_musculus
ENSEASG00005005824	ALYREF	70	97.354	MGP_PahariEiJ_G0018656	-	99	97.354	Mus_pahari
ENSEASG00005005824	ALYREF	95	96.887	MGP_PahariEiJ_G0018655	-	100	96.887	Mus_pahari
ENSEASG00005005824	ALYREF	79	72.778	MGP_PahariEiJ_G0027254	-	84	65.700	Mus_pahari
ENSEASG00005005824	ALYREF	79	72.778	MGP_PahariEiJ_G0027255	-	82	65.700	Mus_pahari
ENSEASG00005005824	ALYREF	90	79.452	MGP_SPRETEiJ_G0015679	Alyref2	98	77.626	Mus_spretus
ENSEASG00005005824	ALYREF	95	96.887	MGP_SPRETEiJ_G0018373	Alyref	100	96.887	Mus_spretus
ENSEASG00005005824	ALYREF	54	77.119	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSEASG00005005824	ALYREF	95	52.632	ENSMLUG00000023213	-	72	55.080	Myotis_lucifugus
ENSEASG00005005824	ALYREF	93	63.745	ENSMLUG00000026271	-	79	62.151	Myotis_lucifugus
ENSEASG00005005824	ALYREF	93	63.137	ENSMLUG00000025677	-	77	61.569	Myotis_lucifugus
ENSEASG00005005824	ALYREF	93	58.462	ENSMLUG00000024471	-	82	52.874	Myotis_lucifugus
ENSEASG00005005824	ALYREF	80	58.904	ENSMLUG00000028343	-	85	65.169	Myotis_lucifugus
ENSEASG00005005824	ALYREF	93	61.961	ENSMLUG00000030407	-	77	60.392	Myotis_lucifugus
ENSEASG00005005824	ALYREF	93	56.202	ENSMLUG00000015043	-	100	50.204	Myotis_lucifugus
ENSEASG00005005824	ALYREF	99	53.101	ENSMLUG00000022869	-	83	53.279	Myotis_lucifugus
ENSEASG00005005824	ALYREF	78	84.112	ENSMLUG00000009555	-	66	93.820	Myotis_lucifugus
ENSEASG00005005824	ALYREF	93	70.238	ENSMLUG00000027516	-	78	67.063	Myotis_lucifugus
ENSEASG00005005824	ALYREF	93	62.846	ENSMLUG00000024976	-	79	59.684	Myotis_lucifugus
ENSEASG00005005824	ALYREF	99	55.691	ENSMLUG00000024447	-	76	60.714	Myotis_lucifugus
ENSEASG00005005824	ALYREF	93	63.953	ENSMLUG00000002626	-	98	65.116	Myotis_lucifugus
ENSEASG00005005824	ALYREF	98	58.130	ENSMLUG00000027352	-	84	57.371	Myotis_lucifugus
ENSEASG00005005824	ALYREF	98	97.348	ENSNLEG00000010313	ALYREF	100	97.348	Nomascus_leucogenys
ENSEASG00005005824	ALYREF	78	74.286	ENSMEUG00000002210	ALYREF	92	74.286	Notamacropus_eugenii
ENSEASG00005005824	ALYREF	50	91.045	ENSOPRG00000005551	-	52	88.806	Ochotona_princeps
ENSEASG00005005824	ALYREF	95	96.923	ENSODEG00000008359	ALYREF	100	96.923	Octodon_degus
ENSEASG00005005824	ALYREF	95	66.545	ENSORLG00000012331	ALYREF	100	69.455	Oryzias_latipes
ENSEASG00005005824	ALYREF	73	89.899	ENSOGAG00000012409	ALYREF	76	93.889	Otolemur_garnettii
ENSEASG00005005824	ALYREF	66	99.438	ENSOARG00000017932	ALYREF	67	99.438	Ovis_aries
ENSEASG00005005824	ALYREF	97	99.237	ENSPPRG00000010829	ALYREF	99	99.237	Panthera_pardus
ENSEASG00005005824	ALYREF	54	98.621	ENSPTIG00000006399	ALYREF	81	98.621	Panthera_tigris_altaica
ENSEASG00005005824	ALYREF	98	97.348	ENSPTRG00000009774	ALYREF	100	97.348	Pan_troglodytes
ENSEASG00005005824	ALYREF	98	96.970	ENSPANG00000019265	ALYREF	100	96.970	Papio_anubis
ENSEASG00005005824	ALYREF	98	96.970	ENSPPYG00000008749	ALYREF	100	96.970	Pongo_abelii
ENSEASG00005005824	ALYREF	97	97.710	ENSPCOG00000020874	ALYREF	99	97.710	Propithecus_coquereli
ENSEASG00005005824	ALYREF	95	80.545	ENSPVAG00000017866	ALYREF	100	80.545	Pteropus_vampyrus
ENSEASG00005005824	ALYREF	64	98.256	ENSRNOG00000036687	Alyref	91	98.256	Rattus_norvegicus
ENSEASG00005005824	ALYREF	67	93.923	ENSRBIG00000039651	ALYREF	74	93.923	Rhinopithecus_bieti
ENSEASG00005005824	ALYREF	86	89.655	ENSRROG00000045364	ALYREF	83	95.261	Rhinopithecus_roxellana
ENSEASG00005005824	ALYREF	71	93.264	ENSSHAG00000010459	ALYREF	95	95.109	Sarcophilus_harrisii
ENSEASG00005005824	ALYREF	95	52.158	ENSSDUG00000003992	-	100	53.381	Seriola_dumerili
ENSEASG00005005824	ALYREF	95	53.091	ENSSLDG00000005386	-	100	53.957	Seriola_lalandi_dorsalis
ENSEASG00005005824	ALYREF	95	82.824	ENSSPUG00000004600	ALYREF	100	80.916	Sphenodon_punctatus
ENSEASG00005005824	ALYREF	95	68.459	ENSSPAG00000011178	ALYREF	97	69.892	Stegastes_partitus
ENSEASG00005005824	ALYREF	95	98.833	ENSSSCG00000032655	ALYREF	100	98.833	Sus_scrofa
ENSEASG00005005824	ALYREF	95	69.118	ENSTRUG00000008828	ALYREF	100	68.266	Takifugu_rubripes
ENSEASG00005005824	ALYREF	66	97.753	ENSTBEG00000005834	ALYREF	100	97.753	Tupaia_belangeri
ENSEASG00005005824	ALYREF	95	97.665	ENSTTRG00000012275	ALYREF	100	97.665	Tursiops_truncatus
ENSEASG00005005824	ALYREF	66	85.311	ENSUAMG00000016931	ALYREF	66	83.051	Ursus_americanus
ENSEASG00005005824	ALYREF	66	85.311	ENSUMAG00000016384	ALYREF	73	76.243	Ursus_maritimus
ENSEASG00005005824	ALYREF	95	74.812	ENSXETG00000005391	alyref	100	73.359	Xenopus_tropicalis