EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005006524 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 80646 bases
Position: chrPSZQ01001020.1:10290283-10370928
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005009114	EST1	PF10374.9	8.4e-25	1	1
ENSEASP00005009121	EST1	PF10374.9	8.7e-25	1	1
ENSEASP00005009114	EST1_DNA_bind	PF10373.9	2e-55	1	1
ENSEASP00005009121	EST1_DNA_bind	PF10373.9	2.1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005009922	SMG7-201	3426	-	ENSEASP00005009114	1141 (aa)	-	-
ENSEAST00005009929	SMG7-202	3536	-	ENSEASP00005009121	1170 (aa)	-	UPI00071AAC20

Gene Model

Click here to download ENSEASG00005006524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005006524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005006524	SMG7	100	97.778	ENSG00000116698	SMG7	100	99.333	Homo_sapiens
ENSEASG00005006524	SMG7	88	72.466	ENSAPOG00000009611	smg7	95	72.466	Acanthochromis_polyacanthus
ENSEASG00005006524	SMG7	96	94.061	ENSAMEG00000002357	SMG7	100	94.061	Ailuropoda_melanoleuca
ENSEASG00005006524	SMG7	97	60.873	ENSACIG00000015152	smg7	100	60.959	Amphilophus_citrinellus
ENSEASG00005006524	SMG7	99	65.404	ENSAOCG00000013538	smg7	99	65.733	Amphiprion_ocellaris
ENSEASG00005006524	SMG7	99	65.267	ENSAPEG00000007851	smg7	99	65.514	Amphiprion_percula
ENSEASG00005006524	SMG7	99	62.787	ENSATEG00000006931	smg7	99	63.361	Anabas_testudineus
ENSEASG00005006524	SMG7	100	82.146	ENSAPLG00000015811	SMG7	100	81.978	Anas_platyrhynchos
ENSEASG00005006524	SMG7	100	84.378	ENSACAG00000014989	SMG7	100	84.712	Anolis_carolinensis
ENSEASG00005006524	SMG7	97	97.464	ENSANAG00000028114	SMG7	100	93.832	Aotus_nancymaae
ENSEASG00005006524	SMG7	99	65.153	ENSACLG00000022079	smg7	99	65.235	Astatotilapia_calliptera
ENSEASG00005006524	SMG7	99	66.946	ENSAMXG00000020809	smg7	99	67.224	Astyanax_mexicanus
ENSEASG00005006524	SMG7	100	97.179	ENSBTAG00000008003	SMG7	100	97.179	Bos_taurus
ENSEASG00005006524	SMG7	99	97.346	ENSCJAG00000005135	SMG7	100	97.341	Callithrix_jacchus
ENSEASG00005006524	SMG7	100	98.120	ENSCAFG00000013276	SMG7	100	98.120	Canis_familiaris
ENSEASG00005006524	SMG7	100	98.120	ENSCAFG00020015475	SMG7	100	98.120	Canis_lupus_dingo
ENSEASG00005006524	SMG7	99	97.090	ENSCHIG00000018192	SMG7	99	97.176	Capra_hircus
ENSEASG00005006524	SMG7	100	97.009	ENSTSYG00000002667	SMG7	100	97.009	Carlito_syrichta
ENSEASG00005006524	SMG7	99	97.341	ENSCPOG00000008906	SMG7	100	97.341	Cavia_porcellus
ENSEASG00005006524	SMG7	100	89.722	ENSCCAG00000028596	SMG7	100	93.624	Cebus_capucinus
ENSEASG00005006524	SMG7	100	97.949	ENSCATG00000011063	SMG7	100	97.949	Cercocebus_atys
ENSEASG00005006524	SMG7	100	97.020	ENSCLAG00000010751	SMG7	100	97.020	Chinchilla_lanigera
ENSEASG00005006524	SMG7	100	97.778	ENSCSAG00000012654	SMG7	100	97.778	Chlorocebus_sabaeus
ENSEASG00005006524	SMG7	92	89.112	ENSCHOG00000010522	SMG7	93	89.494	Choloepus_hoffmanni
ENSEASG00005006524	SMG7	100	88.824	ENSCPBG00000015724	SMG7	100	88.655	Chrysemys_picta_bellii
ENSEASG00005006524	SMG7	96	93.886	ENSCANG00000015680	SMG7	100	93.886	Colobus_angolensis_palliatus
ENSEASG00005006524	SMG7	100	96.231	ENSCGRG00001013705	Smg7	100	96.231	Cricetulus_griseus_chok1gshd
ENSEASG00005006524	SMG7	99	96.117	ENSCGRG00000018401	Smg7	100	96.171	Cricetulus_griseus_crigri
ENSEASG00005006524	SMG7	98	63.629	ENSCVAG00000011842	smg7	100	69.500	Cyprinodon_variegatus
ENSEASG00005006524	SMG7	99	67.055	ENSDARG00000060767	smg7	99	66.972	Danio_rerio
ENSEASG00005006524	SMG7	100	96.845	ENSDORG00000007331	Smg7	100	96.845	Dipodomys_ordii
ENSEASG00005006524	SMG7	97	95.924	ENSETEG00000002654	SMG7	100	95.924	Echinops_telfairi
ENSEASG00005006524	SMG7	100	99.915	ENSECAG00000004313	SMG7	100	99.915	Equus_caballus
ENSEASG00005006524	SMG7	97	96.380	ENSEEUG00000002024	SMG7	94	96.380	Erinaceus_europaeus
ENSEASG00005006524	SMG7	92	77.320	ENSELUG00000010293	smg7	99	65.540	Esox_lucius
ENSEASG00005006524	SMG7	100	98.247	ENSFCAG00000010900	SMG7	100	98.504	Felis_catus
ENSEASG00005006524	SMG7	98	83.503	ENSFALG00000003047	SMG7	100	83.418	Ficedula_albicollis
ENSEASG00005006524	SMG7	99	96.576	ENSFDAG00000012121	SMG7	99	96.970	Fukomys_damarensis
ENSEASG00005006524	SMG7	99	61.328	ENSFHEG00000011073	smg7	99	60.741	Fundulus_heteroclitus
ENSEASG00005006524	SMG7	96	56.750	ENSGMOG00000004916	smg7	92	68.321	Gadus_morhua
ENSEASG00005006524	SMG7	100	82.663	ENSGALG00000004667	SMG7	100	82.496	Gallus_gallus
ENSEASG00005006524	SMG7	99	61.347	ENSGAFG00000019000	smg7	99	60.931	Gambusia_affinis
ENSEASG00005006524	SMG7	97	65.297	ENSGACG00000001634	smg7	99	65.328	Gasterosteus_aculeatus
ENSEASG00005006524	SMG7	100	97.607	ENSGGOG00000002342	SMG7	100	97.607	Gorilla_gorilla
ENSEASG00005006524	SMG7	99	65.153	ENSHBUG00000003726	smg7	97	72.081	Haplochromis_burtoni
ENSEASG00005006524	SMG7	98	97.237	ENSHGLG00000009353	SMG7	100	97.237	Heterocephalus_glaber_female
ENSEASG00005006524	SMG7	98	95.633	ENSHGLG00100009637	-	100	95.633	Heterocephalus_glaber_male
ENSEASG00005006524	SMG7	100	89.220	ENSHGLG00100004878	-	100	89.220	Heterocephalus_glaber_male
ENSEASG00005006524	SMG7	99	67.926	ENSIPUG00000016997	smg7	99	67.842	Ictalurus_punctatus
ENSEASG00005006524	SMG7	100	97.897	ENSSTOG00000000401	SMG7	100	97.897	Ictidomys_tridecemlineatus
ENSEASG00005006524	SMG7	100	95.443	ENSJJAG00000012351	Smg7	100	95.443	Jaculus_jaculus
ENSEASG00005006524	SMG7	97	58.953	ENSKMAG00000004900	smg7	100	59.175	Kryptolebias_marmoratus
ENSEASG00005006524	SMG7	99	63.062	ENSLBEG00000002983	smg7	99	62.978	Labrus_bergylta
ENSEASG00005006524	SMG7	99	75.650	ENSLACG00000000972	SMG7	99	75.847	Latimeria_chalumnae
ENSEASG00005006524	SMG7	99	67.303	ENSLOCG00000002010	smg7	99	67.726	Lepisosteus_oculatus
ENSEASG00005006524	SMG7	99	97.438	ENSLAFG00000008186	SMG7	100	97.476	Loxodonta_africana
ENSEASG00005006524	SMG7	100	98.072	ENSMFAG00000031653	SMG7	100	98.072	Macaca_fascicularis
ENSEASG00005006524	SMG7	100	97.949	ENSMMUG00000018458	SMG7	100	97.949	Macaca_mulatta
ENSEASG00005006524	SMG7	100	90.059	ENSMNEG00000034798	SMG7	100	93.974	Macaca_nemestrina
ENSEASG00005006524	SMG7	100	97.949	ENSMLEG00000037170	SMG7	100	97.949	Mandrillus_leucophaeus
ENSEASG00005006524	SMG7	88	64.657	ENSMAMG00000018733	smg7	84	65.352	Mastacembelus_armatus
ENSEASG00005006524	SMG7	99	65.128	ENSMZEG00005015247	smg7	99	65.235	Maylandia_zebra
ENSEASG00005006524	SMG7	97	82.201	ENSMGAG00000001561	SMG7	98	82.029	Meleagris_gallopavo
ENSEASG00005006524	SMG7	100	96.670	ENSMAUG00000019484	Smg7	100	96.670	Mesocricetus_auratus
ENSEASG00005006524	SMG7	99	97.793	ENSMICG00000007145	SMG7	100	97.911	Microcebus_murinus
ENSEASG00005006524	SMG7	100	96.319	ENSMOCG00000020748	Smg7	100	96.319	Microtus_ochrogaster
ENSEASG00005006524	SMG7	99	60.801	ENSMMOG00000001524	smg7	99	60.953	Mola_mola
ENSEASG00005006524	SMG7	92	85.326	ENSMODG00000007139	SMG7	99	85.364	Monodelphis_domestica
ENSEASG00005006524	SMG7	96	67.662	ENSMALG00000000061	smg7	94	67.662	Monopterus_albus
ENSEASG00005006524	SMG7	100	96.319	MGP_CAROLIEiJ_G0014704	Smg7	100	96.319	Mus_caroli
ENSEASG00005006524	SMG7	100	96.144	ENSMUSG00000042772	Smg7	100	96.144	Mus_musculus
ENSEASG00005006524	SMG7	100	96.144	MGP_PahariEiJ_G0027940	Smg7	100	96.144	Mus_pahari
ENSEASG00005006524	SMG7	100	96.231	MGP_SPRETEiJ_G0015511	Smg7	100	96.231	Mus_spretus
ENSEASG00005006524	SMG7	98	98.039	ENSMPUG00000011732	SMG7	97	98.039	Mustela_putorius_furo
ENSEASG00005006524	SMG7	99	97.440	ENSMLUG00000015417	SMG7	99	97.440	Myotis_lucifugus
ENSEASG00005006524	SMG7	99	96.293	ENSNGAG00000009836	Smg7	100	96.258	Nannospalax_galili
ENSEASG00005006524	SMG7	98	58.075	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSEASG00005006524	SMG7	100	97.949	ENSNLEG00000018018	SMG7	100	97.949	Nomascus_leucogenys
ENSEASG00005006524	SMG7	77	86.280	ENSMEUG00000004681	SMG7	77	86.471	Notamacropus_eugenii
ENSEASG00005006524	SMG7	96	85.205	ENSOPRG00000013942	SMG7	96	84.932	Ochotona_princeps
ENSEASG00005006524	SMG7	100	96.933	ENSODEG00000010390	SMG7	100	96.933	Octodon_degus
ENSEASG00005006524	SMG7	99	62.366	ENSONIG00000000277	smg7	99	62.531	Oreochromis_niloticus
ENSEASG00005006524	SMG7	98	90.780	ENSOANG00000000994	SMG7	100	90.691	Ornithorhynchus_anatinus
ENSEASG00005006524	SMG7	100	89.829	ENSOCUG00000005887	SMG7	95	90.000	Oryctolagus_cuniculus
ENSEASG00005006524	SMG7	99	62.052	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSEASG00005006524	SMG7	99	62.469	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSEASG00005006524	SMG7	99	64.686	ENSORLG00015012289	smg7	99	62.843	Oryzias_latipes_hsok
ENSEASG00005006524	SMG7	99	62.760	ENSOMEG00000002328	smg7	99	62.843	Oryzias_melastigma
ENSEASG00005006524	SMG7	97	95.648	ENSOGAG00000003107	SMG7	94	95.376	Otolemur_garnettii
ENSEASG00005006524	SMG7	100	97.094	ENSOARG00000001352	SMG7	100	97.094	Ovis_aries
ENSEASG00005006524	SMG7	100	90.059	ENSPPAG00000031619	SMG7	100	93.974	Pan_paniscus
ENSEASG00005006524	SMG7	99	98.460	ENSPPRG00000011222	SMG7	100	98.460	Panthera_pardus
ENSEASG00005006524	SMG7	96	98.268	ENSPTIG00000007242	SMG7	100	94.410	Panthera_tigris_altaica
ENSEASG00005006524	SMG7	97	97.917	ENSPTRG00000001764	SMG7	100	93.974	Pan_troglodytes
ENSEASG00005006524	SMG7	100	97.949	ENSPANG00000004520	SMG7	100	97.949	Papio_anubis
ENSEASG00005006524	SMG7	99	64.424	ENSPKIG00000007242	smg7	99	69.000	Paramormyrops_kingsleyae
ENSEASG00005006524	SMG7	99	92.145	ENSPSIG00000012201	SMG7	99	91.615	Pelodiscus_sinensis
ENSEASG00005006524	SMG7	55	56.000	ENSPMGG00000021833	smg7	89	56.500	Periophthalmus_magnuspinnatus
ENSEASG00005006524	SMG7	100	95.618	ENSPEMG00000011315	Smg7	100	95.618	Peromyscus_maniculatus_bairdii
ENSEASG00005006524	SMG7	100	90.152	ENSPCIG00000003786	SMG7	100	91.414	Phascolarctos_cinereus
ENSEASG00005006524	SMG7	99	63.237	ENSPFOG00000019219	smg7	99	63.433	Poecilia_formosa
ENSEASG00005006524	SMG7	99	61.199	ENSPLAG00000001446	smg7	99	61.116	Poecilia_latipinna
ENSEASG00005006524	SMG7	96	60.668	ENSPMEG00000005218	smg7	99	60.583	Poecilia_mexicana
ENSEASG00005006524	SMG7	87	60.342	ENSPREG00000019039	smg7	92	60.113	Poecilia_reticulata
ENSEASG00005006524	SMG7	100	90.143	ENSPPYG00000000427	SMG7	100	90.143	Pongo_abelii
ENSEASG00005006524	SMG7	95	85.701	ENSPCAG00000008360	SMG7	94	85.701	Procavia_capensis
ENSEASG00005006524	SMG7	100	97.863	ENSPCOG00000011996	SMG7	100	97.863	Propithecus_coquereli
ENSEASG00005006524	SMG7	92	92.256	ENSPVAG00000000851	SMG7	89	92.596	Pteropus_vampyrus
ENSEASG00005006524	SMG7	99	65.012	ENSPNYG00000007643	smg7	99	65.012	Pundamilia_nyererei
ENSEASG00005006524	SMG7	99	67.223	ENSPNAG00000011374	smg7	98	69.192	Pygocentrus_nattereri
ENSEASG00005006524	SMG7	100	96.322	ENSRNOG00000027962	Smg7	100	96.561	Rattus_norvegicus
ENSEASG00005006524	SMG7	100	97.863	ENSRBIG00000036316	SMG7	100	97.863	Rhinopithecus_bieti
ENSEASG00005006524	SMG7	100	97.897	ENSRROG00000035719	SMG7	100	97.897	Rhinopithecus_roxellana
ENSEASG00005006524	SMG7	100	97.809	ENSSBOG00000023454	SMG7	100	97.809	Saimiri_boliviensis_boliviensis
ENSEASG00005006524	SMG7	100	85.618	ENSSHAG00000013147	SMG7	100	85.366	Sarcophilus_harrisii
ENSEASG00005006524	SMG7	93	75.000	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSEASG00005006524	SMG7	99	64.950	ENSSMAG00000006067	smg7	99	64.925	Scophthalmus_maximus
ENSEASG00005006524	SMG7	95	72.323	ENSSDUG00000017543	smg7	99	62.684	Seriola_dumerili
ENSEASG00005006524	SMG7	99	83.080	ENSSPUG00000002064	SMG7	99	82.910	Sphenodon_punctatus
ENSEASG00005006524	SMG7	100	62.023	ENSSPAG00000008733	smg7	100	62.117	Stegastes_partitus
ENSEASG00005006524	SMG7	100	98.335	ENSSSCG00000015558	SMG7	100	98.335	Sus_scrofa
ENSEASG00005006524	SMG7	99	82.616	ENSTGUG00000003928	SMG7	100	82.532	Taeniopygia_guttata
ENSEASG00005006524	SMG7	99	64.238	ENSTNIG00000002802	smg7	99	64.497	Tetraodon_nigroviridis
ENSEASG00005006524	SMG7	77	95.763	ENSTBEG00000003220	SMG7	75	95.763	Tupaia_belangeri
ENSEASG00005006524	SMG7	96	98.082	ENSTTRG00000014778	SMG7	94	98.082	Tursiops_truncatus
ENSEASG00005006524	SMG7	96	93.813	ENSUAMG00000017473	SMG7	100	93.813	Ursus_americanus
ENSEASG00005006524	SMG7	96	98.271	ENSUMAG00000016389	SMG7	100	98.271	Ursus_maritimus
ENSEASG00005006524	SMG7	100	98.247	ENSVVUG00000008976	SMG7	100	98.247	Vulpes_vulpes
ENSEASG00005006524	SMG7	100	66.417	ENSXETG00000012528	smg7	100	66.500	Xenopus_tropicalis
ENSEASG00005006524	SMG7	99	61.231	ENSXMAG00000007123	smg7	99	61.398	Xiphophorus_maculatus