EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005007298 (Gene tree)
Gene ID: -
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 27033 bases
Position: chrPSZQ01000736.1:3712120-3739152
Accession: 9758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005010256	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005011163	RAB1A-201	618	-	ENSEASP00005010256	205 (aa)	-	UPI0000001259

Gene Model

Click here to download ENSEASG00005007298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005007298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005007298	RAB1A	95	33.333	ENSEASG00005019924	RAB36	67	33.333
ENSEASG00005007298	RAB1A	84	32.948	ENSEASG00005003529	RAB23	73	32.948
ENSEASG00005007298	RAB1A	82	50.296	ENSEASG00005002926	RAB12	58	50.296
ENSEASG00005007298	RAB1A	86	43.820	ENSEASG00005016822	RAB39B	84	43.820
ENSEASG00005007298	RAB1A	75	36.601	ENSEASG00005008239	-	67	36.601
ENSEASG00005007298	RAB1A	57	36.975	ENSEASG00005019793	ARL14	61	36.975
ENSEASG00005007298	RAB1A	98	45.024	ENSEASG00005003708	-	97	45.024
ENSEASG00005007298	RAB1A	84	46.243	ENSEASG00005019133	RAB25	81	46.243
ENSEASG00005007298	RAB1A	77	40.373	ENSEASG00005009898	RAB34	62	40.373
ENSEASG00005007298	RAB1A	76	39.623	ENSEASG00005002563	RAB9B	79	39.623
ENSEASG00005007298	RAB1A	95	43.878	ENSEASG00005009281	RAB5C	89	43.878
ENSEASG00005007298	RAB1A	99	44.554	ENSEASG00005021919	RAB14	93	44.554
ENSEASG00005007298	RAB1A	90	55.135	ENSEASG00005000683	-	91	55.135
ENSEASG00005007298	RAB1A	80	51.515	ENSEASG00005008666	RAB15	78	51.515
ENSEASG00005007298	RAB1A	83	44.000	ENSEASG00005007864	RAB33B	76	44.000
ENSEASG00005007298	RAB1A	57	33.058	ENSEASG00005018231	-	61	33.058
ENSEASG00005007298	RAB1A	60	45.600	ENSEASG00005019032	-	76	45.600
ENSEASG00005007298	RAB1A	80	36.364	ENSEASG00005001110	-	95	34.807
ENSEASG00005007298	RAB1A	80	47.619	ENSEASG00005007682	RAB33A	71	47.619
ENSEASG00005007298	RAB1A	57	32.203	ENSEASG00005013084	ARL8B	61	32.203
ENSEASG00005007298	RAB1A	97	46.465	ENSEASG00005011485	RAB2B	99	46.465
ENSEASG00005007298	RAB1A	99	93.069	ENSEASG00005004933	RAB1B	100	93.069
ENSEASG00005007298	RAB1A	80	37.805	ENSEASG00005013898	KRAS	95	35.912
ENSEASG00005007298	RAB1A	80	38.415	ENSEASG00005006279	NRAS	86	38.415
ENSEASG00005007298	RAB1A	95	37.629	ENSEASG00005023252	RAB22A	97	37.629
ENSEASG00005007298	RAB1A	81	50.602	ENSEASG00005012754	RAB30	82	50.602
ENSEASG00005007298	RAB1A	90	48.108	ENSEASG00005016261	RAB2A	99	45.238
ENSEASG00005007298	RAB1A	78	39.264	ENSEASG00005006800	RAB7A	79	39.264
ENSEASG00005007298	RAB1A	88	46.703	ENSEASG00005007164	RAB18	93	45.361
ENSEASG00005007298	RAB1A	85	52.299	ENSEASG00005006431	RAB11A	81	52.299
ENSEASG00005007298	RAB1A	57	31.092	ENSEASG00005019989	ARL4C	61	31.092
ENSEASG00005007298	RAB1A	94	37.879	ENSEASG00005017944	RAB6A	94	37.879
ENSEASG00005007298	RAB1A	87	33.514	ENSEASG00005014613	RERG	90	33.514
ENSEASG00005007298	RAB1A	76	39.623	ENSEASG00005016494	RAB9A	79	39.623
ENSEASG00005007298	RAB1A	95	43.367	ENSEASG00005005818	RAB5A	90	43.367
ENSEASG00005007298	RAB1A	80	35.928	ENSEASG00005003778	MRAS	80	35.928
ENSEASG00005007298	RAB1A	82	32.544	ENSEASG00005001996	RHEB	91	32.544

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005007298	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSEASG00005007298	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSEASG00005007298	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSEASG00005007298	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSEASG00005007298	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSEASG00005007298	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSEASG00005007298	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSEASG00005007298	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSEASG00005007298	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSEASG00005007298	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSEASG00005007298	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSEASG00005007298	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSEASG00005007298	RAB1A	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSEASG00005007298	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSEASG00005007298	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSEASG00005007298	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSEASG00005007298	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSEASG00005007298	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSEASG00005007298	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSEASG00005007298	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSEASG00005007298	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSEASG00005007298	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSEASG00005007298	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSEASG00005007298	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSEASG00005007298	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSEASG00005007298	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSEASG00005007298	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSEASG00005007298	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSEASG00005007298	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSEASG00005007298	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSEASG00005007298	RAB1A	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSEASG00005007298	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSEASG00005007298	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSEASG00005007298	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSEASG00005007298	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSEASG00005007298	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSEASG00005007298	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSEASG00005007298	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSEASG00005007298	RAB1A	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSEASG00005007298	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSEASG00005007298	RAB1A	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSEASG00005007298	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSEASG00005007298	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSEASG00005007298	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSEASG00005007298	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSEASG00005007298	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSEASG00005007298	RAB1A	96	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSEASG00005007298	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSEASG00005007298	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSEASG00005007298	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSEASG00005007298	RAB1A	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSEASG00005007298	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSEASG00005007298	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSEASG00005007298	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSEASG00005007298	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSEASG00005007298	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSEASG00005007298	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSEASG00005007298	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSEASG00005007298	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSEASG00005007298	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSEASG00005007298	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSEASG00005007298	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSEASG00005007298	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSEASG00005007298	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSEASG00005007298	RAB1A	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSEASG00005007298	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSEASG00005007298	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSEASG00005007298	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSEASG00005007298	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSEASG00005007298	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSEASG00005007298	RAB1A	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSEASG00005007298	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSEASG00005007298	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSEASG00005007298	RAB1A	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSEASG00005007298	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSEASG00005007298	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSEASG00005007298	RAB1A	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSEASG00005007298	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSEASG00005007298	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSEASG00005007298	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSEASG00005007298	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSEASG00005007298	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSEASG00005007298	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSEASG00005007298	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSEASG00005007298	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSEASG00005007298	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSEASG00005007298	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSEASG00005007298	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSEASG00005007298	RAB1A	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSEASG00005007298	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSEASG00005007298	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSEASG00005007298	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSEASG00005007298	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSEASG00005007298	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSEASG00005007298	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSEASG00005007298	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSEASG00005007298	RAB1A	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSEASG00005007298	RAB1A	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSEASG00005007298	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSEASG00005007298	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus