EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005007374 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 95688 bases
Position: chrPSZQ01000897.1:37688022-37783709
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005010410	UvrD-helicase	PF00580.21	4.9e-06	1	1
ENSEASP00005010403	UvrD-helicase	PF00580.21	5e-05	1	1
ENSEASP00005010402	UvrD-helicase	PF00580.21	5.8e-05	1	1
ENSEASP00005010400	UvrD-helicase	PF00580.21	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005011318	TRANK1-201	8895	-	ENSEASP00005010400	2964 (aa)	-	-
ENSEAST00005011329	TRANK1-204	4935	-	ENSEASP00005010410	1644 (aa)	-	-
ENSEAST00005011320	TRANK1-202	8763	-	ENSEASP00005010402	2920 (aa)	-	-
ENSEAST00005011322	TRANK1-203	7797	-	ENSEASP00005010403	2598 (aa)	-	-

Gene Model

Click here to download ENSEASG00005007374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005007374's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005007374	TRANK1	81	62.518	ENSAPLG00000010356	TRANK1	99	58.043	Anas_platyrhynchos
ENSEASG00005007374	TRANK1	100	85.516	ENSCAFG00020001387	TRANK1	100	85.275	Canis_lupus_dingo
ENSEASG00005007374	TRANK1	98	84.089	ENSTSYG00000025860	TRANK1	99	82.705	Carlito_syrichta
ENSEASG00005007374	TRANK1	98	81.758	ENSCLAG00000003643	TRANK1	99	81.610	Chinchilla_lanigera
ENSEASG00005007374	TRANK1	97	68.146	ENSCPBG00000013529	TRANK1	99	64.409	Chrysemys_picta_bellii
ENSEASG00005007374	TRANK1	98	86.465	ENSCANG00000039915	TRANK1	99	84.833	Colobus_angolensis_palliatus
ENSEASG00005007374	TRANK1	99	82.267	ENSDNOG00000003573	TRANK1	99	80.792	Dasypus_novemcinctus
ENSEASG00005007374	TRANK1	100	99.577	ENSECAG00000018264	TRANK1	100	98.759	Equus_caballus
ENSEASG00005007374	TRANK1	82	79.760	ENSEEUG00000008528	TRANK1	99	79.760	Erinaceus_europaeus
ENSEASG00005007374	TRANK1	99	60.192	ENSFALG00000002875	TRANK1	99	57.219	Ficedula_albicollis
ENSEASG00005007374	TRANK1	99	59.647	ENSGALG00000037629	TRANK1	100	61.108	Gallus_gallus
ENSEASG00005007374	TRANK1	88	66.853	ENSGAGG00000009012	TRANK1	100	63.413	Gopherus_agassizii
ENSEASG00005007374	TRANK1	99	52.213	ENSLOCG00000004808	TRANK1	100	47.715	Lepisosteus_oculatus
ENSEASG00005007374	TRANK1	98	60.848	ENSMGAG00000011934	TRANK1	99	57.335	Meleagris_gallopavo
ENSEASG00005007374	TRANK1	98	85.300	ENSMLUG00000003537	TRANK1	100	83.513	Myotis_lucifugus
ENSEASG00005007374	TRANK1	98	81.626	ENSODEG00000003882	TRANK1	99	80.278	Octodon_degus
ENSEASG00005007374	TRANK1	99	65.276	ENSPSIG00000010217	TRANK1	100	62.351	Pelodiscus_sinensis
ENSEASG00005007374	TRANK1	66	74.342	ENSPCAG00000002172	-	87	74.172	Procavia_capensis
ENSEASG00005007374	TRANK1	81	77.796	ENSPVAG00000004199	TRANK1	100	77.541	Pteropus_vampyrus
ENSEASG00005007374	TRANK1	100	86.697	ENSRBIG00000012281	TRANK1	99	85.106	Rhinopithecus_bieti
ENSEASG00005007374	TRANK1	98	86.818	ENSRROG00000044487	TRANK1	99	85.140	Rhinopithecus_roxellana
ENSEASG00005007374	TRANK1	69	80.634	ENSSARG00000007861	-	74	88.076	Sorex_araneus
ENSEASG00005007374	TRANK1	68	72.435	ENSSPUG00000015974	TRANK1	94	75.692	Sphenodon_punctatus
ENSEASG00005007374	TRANK1	81	62.435	ENSTGUG00000005694	TRANK1	100	58.812	Taeniopygia_guttata
ENSEASG00005007374	TRANK1	99	86.959	ENSUAMG00000027609	-	99	86.715	Ursus_americanus
ENSEASG00005007374	TRANK1	99	85.801	ENSUMAG00000006416	TRANK1	99	85.558	Ursus_maritimus
ENSEASG00005007374	TRANK1	100	85.335	ENSVVUG00000007788	TRANK1	100	85.094	Vulpes_vulpes