EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005007711 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 69811 bases
Position: chrPSZQ01005547.1:9149759-9219569
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005010985	Npa1	PF11707.8	1.3e-87	1	1
ENSEASP00005011010	Npa1	PF11707.8	1.6e-87	1	1
ENSEASP00005010993	Npa1	PF11707.8	8e-87	1	1
ENSEASP00005011007	Npa1	PF11707.8	1.5e-86	1	1
ENSEASP00005011004	Npa1	PF11707.8	2e-86	1	1
ENSEASP00005011006	Npa1	PF11707.8	2.3e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005011941	URB1-201	6048	-	ENSEASP00005010985	2015 (aa)	-	-
ENSEAST00005011949	URB1-202	6567	-	ENSEASP00005010993	2188 (aa)	-	-
ENSEAST00005011962	URB1-204	6699	-	ENSEASP00005011006	2232 (aa)	-	-
ENSEAST00005011960	URB1-203	6768	-	ENSEASP00005011004	2255 (aa)	-	-
ENSEAST00005011966	URB1-206	6207	-	ENSEASP00005011010	2068 (aa)	-	-
ENSEAST00005011963	URB1-205	6510	-	ENSEASP00005011007	2169 (aa)	-	-

Gene Model

Click here to download ENSEASG00005007711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005007711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005007711	URB1	99	82.252	ENSG00000142207	URB1	100	82.218	Homo_sapiens
ENSEASG00005007711	URB1	99	45.662	ENSAPOG00000020308	urb1	99	42.187	Acanthochromis_polyacanthus
ENSEASG00005007711	URB1	100	83.260	ENSAMEG00000011998	URB1	99	83.260	Ailuropoda_melanoleuca
ENSEASG00005007711	URB1	95	44.270	ENSACIG00000003248	urb1	97	44.275	Amphilophus_citrinellus
ENSEASG00005007711	URB1	99	45.794	ENSAOCG00000010364	urb1	99	41.106	Amphiprion_ocellaris
ENSEASG00005007711	URB1	97	50.738	ENSAPEG00000010758	urb1	99	50.738	Amphiprion_percula
ENSEASG00005007711	URB1	97	45.390	ENSATEG00000011790	urb1	92	52.235	Anabas_testudineus
ENSEASG00005007711	URB1	95	61.099	ENSAPLG00000012791	URB1	98	61.209	Anas_platyrhynchos
ENSEASG00005007711	URB1	99	52.531	ENSACAG00000002817	URB1	95	60.045	Anolis_carolinensis
ENSEASG00005007711	URB1	100	81.451	ENSANAG00000024617	URB1	100	81.522	Aotus_nancymaae
ENSEASG00005007711	URB1	99	44.012	ENSACLG00000024865	urb1	99	43.750	Astatotilapia_calliptera
ENSEASG00005007711	URB1	98	40.995	ENSAMXG00000012306	urb1	99	39.001	Astyanax_mexicanus
ENSEASG00005007711	URB1	97	82.743	ENSBTAG00000012412	URB1	99	79.465	Bos_taurus
ENSEASG00005007711	URB1	100	81.431	ENSCJAG00000009118	URB1	100	81.503	Callithrix_jacchus
ENSEASG00005007711	URB1	100	84.058	ENSCAFG00000008892	URB1	100	84.058	Canis_familiaris
ENSEASG00005007711	URB1	100	83.715	ENSCAFG00020025987	-	100	83.715	Canis_lupus_dingo
ENSEASG00005007711	URB1	100	82.835	ENSCAFG00020025994	-	100	82.835	Canis_lupus_dingo
ENSEASG00005007711	URB1	98	83.429	ENSCHIG00000015645	URB1	100	78.728	Capra_hircus
ENSEASG00005007711	URB1	100	81.462	ENSTSYG00000013286	URB1	99	81.522	Carlito_syrichta
ENSEASG00005007711	URB1	98	75.585	ENSCAPG00000015589	URB1	99	75.585	Cavia_aperea
ENSEASG00005007711	URB1	100	77.035	ENSCPOG00000006748	URB1	100	77.035	Cavia_porcellus
ENSEASG00005007711	URB1	100	82.102	ENSCCAG00000021299	URB1	100	82.262	Cebus_capucinus
ENSEASG00005007711	URB1	100	82.014	ENSCATG00000042630	URB1	100	82.086	Cercocebus_atys
ENSEASG00005007711	URB1	99	78.521	ENSCLAG00000005262	URB1	99	78.521	Chinchilla_lanigera
ENSEASG00005007711	URB1	100	80.298	ENSCSAG00000009584	URB1	100	80.368	Chlorocebus_sabaeus
ENSEASG00005007711	URB1	98	62.771	ENSCPBG00000006454	URB1	99	58.693	Chrysemys_picta_bellii
ENSEASG00005007711	URB1	100	81.750	ENSCANG00000031088	URB1	100	81.822	Colobus_angolensis_palliatus
ENSEASG00005007711	URB1	98	74.654	ENSCGRG00001010616	Urb1	99	74.449	Cricetulus_griseus_chok1gshd
ENSEASG00005007711	URB1	98	74.279	ENSCGRG00000015840	Urb1	99	74.279	Cricetulus_griseus_crigri
ENSEASG00005007711	URB1	95	50.980	ENSCSEG00000012616	urb1	99	47.778	Cynoglossus_semilaevis
ENSEASG00005007711	URB1	96	54.767	ENSCVAG00000009076	urb1	97	54.767	Cyprinodon_variegatus
ENSEASG00005007711	URB1	98	44.109	ENSDARG00000060308	urb1	99	42.914	Danio_rerio
ENSEASG00005007711	URB1	85	79.700	ENSDNOG00000015586	URB1	99	79.700	Dasypus_novemcinctus
ENSEASG00005007711	URB1	99	78.556	ENSDORG00000006735	Urb1	99	78.556	Dipodomys_ordii
ENSEASG00005007711	URB1	92	81.455	ENSETEG00000009080	URB1	92	81.455	Echinops_telfairi
ENSEASG00005007711	URB1	100	97.665	ENSECAG00000013206	URB1	100	97.665	Equus_caballus
ENSEASG00005007711	URB1	60	89.167	ENSEEUG00000003626	-	58	89.167	Erinaceus_europaeus
ENSEASG00005007711	URB1	94	52.961	ENSELUG00000020516	urb1	92	53.955	Esox_lucius
ENSEASG00005007711	URB1	100	83.260	ENSFCAG00000002177	URB1	100	83.399	Felis_catus
ENSEASG00005007711	URB1	96	53.349	ENSFALG00000004636	URB1	99	51.107	Ficedula_albicollis
ENSEASG00005007711	URB1	100	77.841	ENSFDAG00000007288	URB1	95	77.841	Fukomys_damarensis
ENSEASG00005007711	URB1	99	41.705	ENSFHEG00000000202	urb1	94	48.993	Fundulus_heteroclitus
ENSEASG00005007711	URB1	93	46.067	ENSGMOG00000001838	urb1	94	46.067	Gadus_morhua
ENSEASG00005007711	URB1	99	55.624	ENSGALG00000015887	URB1	99	55.580	Gallus_gallus
ENSEASG00005007711	URB1	94	51.592	ENSGAFG00000020694	urb1	98	51.592	Gambusia_affinis
ENSEASG00005007711	URB1	99	44.961	ENSGACG00000011703	urb1	99	44.484	Gasterosteus_aculeatus
ENSEASG00005007711	URB1	98	61.398	ENSGAGG00000022544	URB1	99	61.398	Gopherus_agassizii
ENSEASG00005007711	URB1	100	82.102	ENSGGOG00000000285	URB1	100	82.174	Gorilla_gorilla
ENSEASG00005007711	URB1	99	44.023	ENSHBUG00000001904	urb1	99	43.750	Haplochromis_burtoni
ENSEASG00005007711	URB1	99	77.080	ENSHGLG00000004907	URB1	99	77.080	Heterocephalus_glaber_female
ENSEASG00005007711	URB1	99	77.656	ENSHGLG00100010749	URB1	99	77.656	Heterocephalus_glaber_male
ENSEASG00005007711	URB1	74	52.047	ENSHCOG00000018683	urb1	97	52.816	Hippocampus_comes
ENSEASG00005007711	URB1	99	39.127	ENSIPUG00000014721	urb1	99	39.303	Ictalurus_punctatus
ENSEASG00005007711	URB1	99	80.141	ENSSTOG00000004539	URB1	99	80.141	Ictidomys_tridecemlineatus
ENSEASG00005007711	URB1	99	45.516	ENSKMAG00000006001	urb1	92	55.247	Kryptolebias_marmoratus
ENSEASG00005007711	URB1	96	44.604	ENSLBEG00000027208	urb1	99	50.689	Labrus_bergylta
ENSEASG00005007711	URB1	99	48.006	ENSLACG00000017059	URB1	93	55.595	Latimeria_chalumnae
ENSEASG00005007711	URB1	99	47.469	ENSLOCG00000009190	urb1	99	45.635	Lepisosteus_oculatus
ENSEASG00005007711	URB1	99	78.148	ENSLAFG00000010407	URB1	100	78.192	Loxodonta_africana
ENSEASG00005007711	URB1	100	81.838	ENSMFAG00000034391	URB1	97	81.910	Macaca_fascicularis
ENSEASG00005007711	URB1	100	81.662	ENSMMUG00000010295	URB1	100	81.734	Macaca_mulatta
ENSEASG00005007711	URB1	100	80.573	ENSMNEG00000032981	URB1	100	80.830	Macaca_nemestrina
ENSEASG00005007711	URB1	100	81.926	ENSMLEG00000041435	URB1	100	81.998	Mandrillus_leucophaeus
ENSEASG00005007711	URB1	99	45.669	ENSMAMG00000011238	urb1	99	42.988	Mastacembelus_armatus
ENSEASG00005007711	URB1	98	40.527	ENSMZEG00005011862	urb1	98	46.495	Maylandia_zebra
ENSEASG00005007711	URB1	98	56.260	ENSMGAG00000014512	URB1	99	55.956	Meleagris_gallopavo
ENSEASG00005007711	URB1	95	77.895	ENSMAUG00000010516	Urb1	99	78.045	Mesocricetus_auratus
ENSEASG00005007711	URB1	97	83.066	ENSMICG00000016424	URB1	99	80.987	Microcebus_murinus
ENSEASG00005007711	URB1	98	74.502	ENSMOCG00000012613	Urb1	99	73.160	Microtus_ochrogaster
ENSEASG00005007711	URB1	99	63.776	ENSMODG00000021076	URB1	100	63.776	Monodelphis_domestica
ENSEASG00005007711	URB1	93	51.371	ENSMALG00000017411	urb1	97	51.266	Monopterus_albus
ENSEASG00005007711	URB1	99	73.251	MGP_CAROLIEiJ_G0020948	Urb1	99	73.909	Mus_caroli
ENSEASG00005007711	URB1	99	73.295	ENSMUSG00000039929	Urb1	99	73.295	Mus_musculus
ENSEASG00005007711	URB1	99	73.515	MGP_PahariEiJ_G0016653	Urb1	99	73.515	Mus_pahari
ENSEASG00005007711	URB1	99	73.239	MGP_SPRETEiJ_G0021854	Urb1	99	73.575	Mus_spretus
ENSEASG00005007711	URB1	100	81.866	ENSMPUG00000001123	URB1	100	81.894	Mustela_putorius_furo
ENSEASG00005007711	URB1	99	74.483	ENSNGAG00000001905	Urb1	99	74.483	Nannospalax_galili
ENSEASG00005007711	URB1	89	42.022	ENSNBRG00000001049	urb1	99	43.375	Neolamprologus_brichardi
ENSEASG00005007711	URB1	99	80.309	ENSNLEG00000026872	URB1	100	80.370	Nomascus_leucogenys
ENSEASG00005007711	URB1	91	67.110	ENSMEUG00000010828	URB1	91	65.226	Notamacropus_eugenii
ENSEASG00005007711	URB1	99	72.276	ENSOPRG00000013482	URB1	100	72.276	Ochotona_princeps
ENSEASG00005007711	URB1	100	76.923	ENSODEG00000002587	URB1	99	76.923	Octodon_degus
ENSEASG00005007711	URB1	99	44.692	ENSONIG00000005599	urb1	99	44.070	Oreochromis_niloticus
ENSEASG00005007711	URB1	98	79.853	ENSOCUG00000009381	URB1	99	78.634	Oryctolagus_cuniculus
ENSEASG00005007711	URB1	99	45.146	ENSORLG00000003429	urb1	99	43.518	Oryzias_latipes
ENSEASG00005007711	URB1	99	44.992	ENSORLG00020013785	urb1	99	43.562	Oryzias_latipes_hni
ENSEASG00005007711	URB1	99	44.644	ENSORLG00015019421	urb1	99	49.860	Oryzias_latipes_hsok
ENSEASG00005007711	URB1	72	58.333	ENSOMEG00000002094	urb1	96	58.333	Oryzias_melastigma
ENSEASG00005007711	URB1	99	80.441	ENSOGAG00000017140	URB1	100	80.441	Otolemur_garnettii
ENSEASG00005007711	URB1	97	79.474	ENSOARG00000013679	URB1	100	79.474	Ovis_aries
ENSEASG00005007711	URB1	100	82.366	ENSPPAG00000003423	URB1	100	82.438	Pan_paniscus
ENSEASG00005007711	URB1	100	83.436	ENSPPRG00000023131	URB1	100	83.436	Panthera_pardus
ENSEASG00005007711	URB1	92	81.598	ENSPTIG00000016125	URB1	98	81.598	Panthera_tigris_altaica
ENSEASG00005007711	URB1	100	82.234	ENSPTRG00000013852	URB1	100	82.306	Pan_troglodytes
ENSEASG00005007711	URB1	100	82.102	ENSPANG00000021964	URB1	100	82.174	Papio_anubis
ENSEASG00005007711	URB1	98	45.935	ENSPKIG00000003683	urb1	98	44.916	Paramormyrops_kingsleyae
ENSEASG00005007711	URB1	100	74.330	ENSPEMG00000021205	Urb1	99	74.330	Peromyscus_maniculatus_bairdii
ENSEASG00005007711	URB1	76	35.754	ENSPMAG00000009733	URB1	99	33.661	Petromyzon_marinus
ENSEASG00005007711	URB1	99	63.469	ENSPCIG00000016350	URB1	100	63.469	Phascolarctos_cinereus
ENSEASG00005007711	URB1	95	44.026	ENSPLAG00000004371	urb1	99	42.431	Poecilia_latipinna
ENSEASG00005007711	URB1	99	44.427	ENSPMEG00000006634	urb1	99	42.901	Poecilia_mexicana
ENSEASG00005007711	URB1	99	44.049	ENSPREG00000013453	urb1	99	42.976	Poecilia_reticulata
ENSEASG00005007711	URB1	99	81.898	ENSPPYG00000011359	URB1	100	81.866	Pongo_abelii
ENSEASG00005007711	URB1	97	72.271	ENSPCAG00000007430	URB1	99	67.875	Procavia_capensis
ENSEASG00005007711	URB1	100	82.034	ENSPCOG00000022695	URB1	100	82.210	Propithecus_coquereli
ENSEASG00005007711	URB1	100	82.203	ENSPVAG00000000889	URB1	100	82.203	Pteropus_vampyrus
ENSEASG00005007711	URB1	98	43.882	ENSPNYG00000010589	urb1	93	52.934	Pundamilia_nyererei
ENSEASG00005007711	URB1	99	39.702	ENSPNAG00000019324	urb1	99	39.772	Pygocentrus_nattereri
ENSEASG00005007711	URB1	98	74.163	ENSRNOG00000002080	Urb1	99	73.263	Rattus_norvegicus
ENSEASG00005007711	URB1	100	81.179	ENSRBIG00000033122	URB1	100	81.250	Rhinopithecus_bieti
ENSEASG00005007711	URB1	100	81.223	ENSRROG00000040237	URB1	100	81.294	Rhinopithecus_roxellana
ENSEASG00005007711	URB1	100	81.890	ENSSBOG00000027672	URB1	100	81.962	Saimiri_boliviensis_boliviensis
ENSEASG00005007711	URB1	99	63.010	ENSSHAG00000005140	URB1	100	63.010	Sarcophilus_harrisii
ENSEASG00005007711	URB1	93	45.233	ENSSFOG00015000339	urb1	99	45.073	Scleropages_formosus
ENSEASG00005007711	URB1	98	49.738	ENSSMAG00000003782	urb1	97	49.738	Scophthalmus_maximus
ENSEASG00005007711	URB1	99	44.733	ENSSDUG00000012313	urb1	95	50.609	Seriola_dumerili
ENSEASG00005007711	URB1	99	44.554	ENSSLDG00000023179	urb1	95	50.166	Seriola_lalandi_dorsalis
ENSEASG00005007711	URB1	99	55.793	ENSSPUG00000012447	URB1	100	54.870	Sphenodon_punctatus
ENSEASG00005007711	URB1	99	45.696	ENSSPAG00000006325	urb1	99	43.927	Stegastes_partitus
ENSEASG00005007711	URB1	100	80.202	ENSSSCG00000032024	URB1	100	80.202	Sus_scrofa
ENSEASG00005007711	URB1	71	64.706	ENSTGUG00000013442	URB1	100	56.792	Taeniopygia_guttata
ENSEASG00005007711	URB1	99	43.948	ENSTRUG00000009372	urb1	99	42.514	Takifugu_rubripes
ENSEASG00005007711	URB1	99	42.450	ENSTNIG00000016277	urb1	99	42.406	Tetraodon_nigroviridis
ENSEASG00005007711	URB1	81	82.609	ENSTBEG00000010044	URB1	81	82.609	Tupaia_belangeri
ENSEASG00005007711	URB1	91	80.524	ENSTTRG00000007712	URB1	92	80.524	Tursiops_truncatus
ENSEASG00005007711	URB1	100	83.612	ENSUAMG00000012231	URB1	99	83.612	Ursus_americanus
ENSEASG00005007711	URB1	95	83.244	ENSUMAG00000017419	URB1	98	84.384	Ursus_maritimus
ENSEASG00005007711	URB1	68	92.553	ENSVPAG00000001164	URB1	68	93.043	Vicugna_pacos
ENSEASG00005007711	URB1	100	83.465	ENSVVUG00000000551	URB1	100	83.465	Vulpes_vulpes
ENSEASG00005007711	URB1	98	54.386	ENSXETG00000009895	urb1	98	54.404	Xenopus_tropicalis
ENSEASG00005007711	URB1	99	45.267	ENSXCOG00000005500	urb1	97	44.979	Xiphophorus_couchianus
ENSEASG00005007711	URB1	99	45.353	ENSXMAG00000007253	urb1	93	49.695	Xiphophorus_maculatus