EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005007756 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 57102 bases
Position: chrPSZQ01005547.1:9706080-9763181
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005011041	RRM_1	PF00076.22	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005012004	SCAF4-201	3876	-	ENSEASP00005011041	1140 (aa)	-	-

Gene Model

Click here to download ENSEASG00005007756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005007756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005007756	SCAF4	100	93.897	ENSG00000156304	SCAF4	100	93.723	Homo_sapiens
ENSEASG00005007756	SCAF4	52	61.905	ENSAPOG00000019615	scaf4b	60	67.005	Acanthochromis_polyacanthus
ENSEASG00005007756	SCAF4	75	96.266	ENSAMEG00000014987	SCAF4	100	96.266	Ailuropoda_melanoleuca
ENSEASG00005007756	SCAF4	99	76.157	ENSAPLG00000002509	SCAF4	59	83.410	Anas_platyrhynchos
ENSEASG00005007756	SCAF4	100	63.718	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSEASG00005007756	SCAF4	100	93.641	ENSANAG00000037494	SCAF4	100	93.902	Aotus_nancymaae
ENSEASG00005007756	SCAF4	93	50.000	ENSAMXG00000008585	scaf4a	60	62.179	Astyanax_mexicanus
ENSEASG00005007756	SCAF4	100	94.926	ENSBTAG00000018855	SCAF4	100	94.663	Bos_taurus
ENSEASG00005007756	SCAF4	100	93.734	ENSCJAG00000008993	SCAF4	99	95.928	Callithrix_jacchus
ENSEASG00005007756	SCAF4	99	97.613	ENSCAFG00000008863	SCAF4	99	97.613	Canis_familiaris
ENSEASG00005007756	SCAF4	99	95.402	ENSCAFG00020026019	SCAF4	100	97.418	Canis_lupus_dingo
ENSEASG00005007756	SCAF4	100	94.246	ENSCHIG00000008385	SCAF4	100	94.159	Capra_hircus
ENSEASG00005007756	SCAF4	91	94.312	ENSTSYG00000011344	SCAF4	98	94.322	Carlito_syrichta
ENSEASG00005007756	SCAF4	100	89.236	ENSCPOG00000012443	SCAF4	100	89.560	Cavia_porcellus
ENSEASG00005007756	SCAF4	100	95.466	ENSCCAG00000033727	SCAF4	100	95.466	Cebus_capucinus
ENSEASG00005007756	SCAF4	100	93.316	ENSCATG00000030379	SCAF4	100	93.576	Cercocebus_atys
ENSEASG00005007756	SCAF4	99	90.964	ENSCLAG00000006298	SCAF4	100	90.530	Chinchilla_lanigera
ENSEASG00005007756	SCAF4	100	93.918	ENSCSAG00000009438	SCAF4	100	94.266	Chlorocebus_sabaeus
ENSEASG00005007756	SCAF4	100	94.154	ENSCANG00000029847	SCAF4	100	94.154	Colobus_angolensis_palliatus
ENSEASG00005007756	SCAF4	67	90.260	ENSCGRG00001020821	Scaf4	65	90.649	Cricetulus_griseus_chok1gshd
ENSEASG00005007756	SCAF4	68	89.419	ENSCGRG00000014360	Scaf4	100	82.098	Cricetulus_griseus_crigri
ENSEASG00005007756	SCAF4	79	52.183	ENSCSEG00000019549	scaf4a	53	54.726	Cynoglossus_semilaevis
ENSEASG00005007756	SCAF4	79	53.921	ENSDARG00000077093	scaf4a	56	60.337	Danio_rerio
ENSEASG00005007756	SCAF4	100	91.681	ENSDNOG00000019014	SCAF4	94	91.681	Dasypus_novemcinctus
ENSEASG00005007756	SCAF4	96	81.341	ENSETEG00000000583	SCAF4	99	81.341	Echinops_telfairi
ENSEASG00005007756	SCAF4	100	99.825	ENSECAG00000014248	SCAF4	100	99.825	Equus_caballus
ENSEASG00005007756	SCAF4	59	52.862	ENSELUG00000002779	SCAF8	61	68.841	Esox_lucius
ENSEASG00005007756	SCAF4	100	97.038	ENSFCAG00000002228	SCAF4	100	97.038	Felis_catus
ENSEASG00005007756	SCAF4	99	89.888	ENSFDAG00000017780	SCAF4	100	89.888	Fukomys_damarensis
ENSEASG00005007756	SCAF4	100	77.352	ENSGALG00000033965	SCAF4	59	83.639	Gallus_gallus
ENSEASG00005007756	SCAF4	91	90.771	ENSGGOG00000015557	SCAF4	100	93.598	Gorilla_gorilla
ENSEASG00005007756	SCAF4	100	90.917	ENSHGLG00000010582	SCAF4	100	91.609	Heterocephalus_glaber_female
ENSEASG00005007756	SCAF4	99	90.806	ENSHGLG00100009441	SCAF4	100	91.506	Heterocephalus_glaber_male
ENSEASG00005007756	SCAF4	99	86.861	ENSSTOG00000004450	SCAF4	100	86.949	Ictidomys_tridecemlineatus
ENSEASG00005007756	SCAF4	99	89.938	ENSJJAG00000019447	Scaf4	99	90.115	Jaculus_jaculus
ENSEASG00005007756	SCAF4	97	61.545	ENSLACG00000013913	SCAF4	59	68.289	Latimeria_chalumnae
ENSEASG00005007756	SCAF4	96	57.655	ENSLOCG00000009162	scaf4a	59	66.865	Lepisosteus_oculatus
ENSEASG00005007756	SCAF4	99	93.316	ENSLAFG00000010710	SCAF4	100	93.668	Loxodonta_africana
ENSEASG00005007756	SCAF4	100	93.333	ENSMFAG00000037668	SCAF4	100	93.160	Macaca_fascicularis
ENSEASG00005007756	SCAF4	100	93.247	ENSMMUG00000001712	SCAF4	100	93.074	Macaca_mulatta
ENSEASG00005007756	SCAF4	100	93.080	ENSMNEG00000032966	SCAF4	100	93.080	Macaca_nemestrina
ENSEASG00005007756	SCAF4	99	93.438	ENSMLEG00000039674	SCAF4	100	93.526	Mandrillus_leucophaeus
ENSEASG00005007756	SCAF4	99	76.997	ENSMGAG00000014515	SCAF4	59	83.566	Meleagris_gallopavo
ENSEASG00005007756	SCAF4	99	88.584	ENSMAUG00000013307	Scaf4	100	88.673	Mesocricetus_auratus
ENSEASG00005007756	SCAF4	100	95.717	ENSMICG00000005256	SCAF4	100	95.717	Microcebus_murinus
ENSEASG00005007756	SCAF4	98	91.788	ENSMOCG00000012087	Scaf4	95	92.318	Microtus_ochrogaster
ENSEASG00005007756	SCAF4	100	85.664	ENSMODG00000021040	SCAF4	100	84.528	Monodelphis_domestica
ENSEASG00005007756	SCAF4	100	89.345	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.433	Mus_caroli
ENSEASG00005007756	SCAF4	100	89.161	ENSMUSG00000022983	Scaf4	95	90.026	Mus_musculus
ENSEASG00005007756	SCAF4	66	88.351	MGP_PahariEiJ_G0016649	Scaf4	100	85.090	Mus_pahari
ENSEASG00005007756	SCAF4	100	83.813	MGP_SPRETEiJ_G0021850	Scaf4	100	85.697	Mus_spretus
ENSEASG00005007756	SCAF4	100	93.148	ENSMPUG00000001078	SCAF4	100	93.148	Mustela_putorius_furo
ENSEASG00005007756	SCAF4	99	78.261	ENSMLUG00000011472	SCAF4	79	83.713	Myotis_lucifugus
ENSEASG00005007756	SCAF4	99	89.694	ENSNGAG00000005214	Scaf4	99	90.702	Nannospalax_galili
ENSEASG00005007756	SCAF4	100	93.984	ENSNLEG00000003569	SCAF4	100	94.071	Nomascus_leucogenys
ENSEASG00005007756	SCAF4	78	89.674	ENSOPRG00000007016	SCAF4	77	89.674	Ochotona_princeps
ENSEASG00005007756	SCAF4	100	89.374	ENSODEG00000002718	SCAF4	100	89.374	Octodon_degus
ENSEASG00005007756	SCAF4	71	59.740	ENSONIG00000004687	scaf4a	51	75.000	Oreochromis_niloticus
ENSEASG00005007756	SCAF4	100	88.571	ENSOCUG00000008336	SCAF4	100	88.831	Oryctolagus_cuniculus
ENSEASG00005007756	SCAF4	52	57.874	ENSORLG00000003420	scaf4b	66	59.072	Oryzias_latipes
ENSEASG00005007756	SCAF4	99	82.285	ENSOGAG00000014653	SCAF4	94	95.196	Otolemur_garnettii
ENSEASG00005007756	SCAF4	99	93.843	ENSOARG00000013894	SCAF4	99	93.450	Ovis_aries
ENSEASG00005007756	SCAF4	100	93.897	ENSPPAG00000028535	SCAF4	100	93.723	Pan_paniscus
ENSEASG00005007756	SCAF4	99	97.004	ENSPPRG00000000635	SCAF4	100	97.004	Panthera_pardus
ENSEASG00005007756	SCAF4	99	93.064	ENSPTIG00000021578	SCAF4	99	93.064	Panthera_tigris_altaica
ENSEASG00005007756	SCAF4	100	93.897	ENSPTRG00000013848	SCAF4	100	93.723	Pan_troglodytes
ENSEASG00005007756	SCAF4	100	93.074	ENSPANG00000017332	SCAF4	100	93.506	Papio_anubis
ENSEASG00005007756	SCAF4	64	63.408	ENSPKIG00000022408	scaf4a	90	66.018	Paramormyrops_kingsleyae
ENSEASG00005007756	SCAF4	99	77.377	ENSPSIG00000014242	SCAF4	57	84.317	Pelodiscus_sinensis
ENSEASG00005007756	SCAF4	61	87.626	ENSPCIG00000028183	SCAF4	91	82.582	Phascolarctos_cinereus
ENSEASG00005007756	SCAF4	100	93.815	ENSPPYG00000011355	SCAF4	100	93.902	Pongo_abelii
ENSEASG00005007756	SCAF4	100	83.770	ENSPCAG00000009998	SCAF4	68	82.890	Procavia_capensis
ENSEASG00005007756	SCAF4	100	93.565	ENSPCOG00000018710	SCAF4	100	93.565	Propithecus_coquereli
ENSEASG00005007756	SCAF4	100	96.404	ENSPVAG00000005220	SCAF4	100	96.140	Pteropus_vampyrus
ENSEASG00005007756	SCAF4	76	58.032	ENSPNAG00000016892	scaf4a	60	63.677	Pygocentrus_nattereri
ENSEASG00005007756	SCAF4	98	87.166	ENSRNOG00000002104	Scaf4	95	85.090	Rattus_norvegicus
ENSEASG00005007756	SCAF4	99	92.240	ENSRBIG00000040007	SCAF4	61	95.890	Rhinopithecus_bieti
ENSEASG00005007756	SCAF4	100	94.764	ENSRROG00000029488	SCAF4	100	94.585	Rhinopithecus_roxellana
ENSEASG00005007756	SCAF4	100	85.026	ENSSHAG00000001581	SCAF4	100	83.625	Sarcophilus_harrisii
ENSEASG00005007756	SCAF4	66	52.978	ENSSFOG00015006338	scaf4a	54	57.248	Scleropages_formosus
ENSEASG00005007756	SCAF4	80	53.248	ENSSMAG00000017901	scaf4a	53	53.235	Scophthalmus_maximus
ENSEASG00005007756	SCAF4	66	60.000	ENSSMAG00000003738	scaf4b	54	72.152	Scophthalmus_maximus
ENSEASG00005007756	SCAF4	57	62.007	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSEASG00005007756	SCAF4	57	62.007	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSEASG00005007756	SCAF4	100	90.191	ENSSARG00000009994	SCAF4	100	89.757	Sorex_araneus
ENSEASG00005007756	SCAF4	100	92.135	ENSSSCG00000021023	SCAF4	100	92.135	Sus_scrofa
ENSEASG00005007756	SCAF4	74	72.030	ENSTGUG00000013464	SCAF4	57	85.382	Taeniopygia_guttata
ENSEASG00005007756	SCAF4	50	59.489	ENSTRUG00000009536	-	65	58.065	Takifugu_rubripes
ENSEASG00005007756	SCAF4	99	94.867	ENSTTRG00000010963	SCAF4	100	94.690	Tursiops_truncatus
ENSEASG00005007756	SCAF4	100	95.351	ENSUAMG00000008860	SCAF4	100	95.351	Ursus_americanus
ENSEASG00005007756	SCAF4	99	94.494	ENSUMAG00000016962	SCAF4	100	94.494	Ursus_maritimus
ENSEASG00005007756	SCAF4	99	97.691	ENSVVUG00000002953	SCAF4	100	97.691	Vulpes_vulpes
ENSEASG00005007756	SCAF4	99	55.602	ENSXETG00000007351	scaf4	63	65.812	Xenopus_tropicalis