EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005007883 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 1113 bases
Position: chrPSZQ01001512.1:7152791-7153903
Accession: 31955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005011196	RRM_5	PF13893.6	2e-16	1	3
ENSEASP00005011196	RRM_5	PF13893.6	2e-16	2	3
ENSEASP00005011196	RRM_5	PF13893.6	2e-16	3	3
ENSEASP00005011196	RRM_1	PF00076.22	3.2e-84	1	4
ENSEASP00005011196	RRM_1	PF00076.22	3.2e-84	2	4
ENSEASP00005011196	RRM_1	PF00076.22	3.2e-84	3	4
ENSEASP00005011196	RRM_1	PF00076.22	3.2e-84	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005012175	PABPC4L-201	1113	-	ENSEASP00005011196	370 (aa)	-	UPI00071A7381

Gene Model

Click here to download ENSEASG00005007883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005007883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005007883	PABPC4L	95	60.606	ENSEASG00005010399	-	96	60.606
ENSEASG00005007883	PABPC4L	91	67.273	ENSEASG00005023408	-	99	67.273
ENSEASG00005007883	PABPC4L	77	67.500	ENSEASG00005023407	-	54	67.500
ENSEASG00005007883	PABPC4L	97	31.319	ENSEASG00005010062	TRNAU1AP	89	36.111
ENSEASG00005007883	PABPC4L	98	32.099	ENSEASG00005004697	ELAVL2	96	32.099
ENSEASG00005007883	PABPC4L	54	38.356	ENSEASG00005003162	-	78	38.356
ENSEASG00005007883	PABPC4L	98	33.333	ENSEASG00005010728	ELAVL4	94	33.333
ENSEASG00005007883	PABPC4L	99	69.730	ENSEASG00005002810	PABPC1	61	69.730
ENSEASG00005007883	PABPC4L	99	30.435	ENSEASG00005004561	ELAVL3	89	30.435
ENSEASG00005007883	PABPC4L	98	62.360	ENSEASG00005014396	PABPC5	96	62.363
ENSEASG00005007883	PABPC4L	71	31.217	ENSEASG00005022530	HNRNPA3	59	30.270
ENSEASG00005007883	PABPC4L	99	73.243	ENSEASG00005014119	PABPC4	58	73.243
ENSEASG00005007883	PABPC4L	97	50.284	ENSEASG00005014126	-	71	43.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005007883	PABPC4L	99	89.702	ENSG00000254535	PABPC4L	99	89.702	Homo_sapiens
ENSEASG00005007883	PABPC4L	99	86.992	ENSANAG00000017199	PABPC4L	86	86.992	Aotus_nancymaae
ENSEASG00005007883	PABPC4L	100	92.432	ENSBTAG00000046902	PABPC4L	100	92.432	Bos_taurus
ENSEASG00005007883	PABPC4L	99	87.263	ENSCJAG00000045332	PABPC4L	86	87.263	Callithrix_jacchus
ENSEASG00005007883	PABPC4L	99	75.272	ENSCAFG00020019182	-	55	75.272	Canis_lupus_dingo
ENSEASG00005007883	PABPC4L	100	92.162	ENSCHIG00000007231	PABPC4L	100	92.162	Capra_hircus
ENSEASG00005007883	PABPC4L	97	78.144	ENSCAPG00000000555	PABPC4L	100	78.144	Cavia_aperea
ENSEASG00005007883	PABPC4L	99	75.339	ENSCPOG00000033167	PABPC4L	100	75.339	Cavia_porcellus
ENSEASG00005007883	PABPC4L	99	87.263	ENSCCAG00000031681	PABPC4L	86	87.263	Cebus_capucinus
ENSEASG00005007883	PABPC4L	99	81.030	ENSCLAG00000017628	PABPC4L	99	81.030	Chinchilla_lanigera
ENSEASG00005007883	PABPC4L	99	87.534	ENSCANG00000037677	PABPC4L	99	87.534	Colobus_angolensis_palliatus
ENSEASG00005007883	PABPC4L	99	79.946	ENSCGRG00001002070	Pabpc4l	99	79.946	Cricetulus_griseus_chok1gshd
ENSEASG00005007883	PABPC4L	99	79.946	ENSCGRG00000020086	Pabpc4l	99	79.946	Cricetulus_griseus_crigri
ENSEASG00005007883	PABPC4L	99	89.702	ENSDNOG00000031077	PABPC4L	95	89.702	Dasypus_novemcinctus
ENSEASG00005007883	PABPC4L	100	99.459	ENSECAG00000031416	PABPC4L	100	99.459	Equus_caballus
ENSEASG00005007883	PABPC4L	100	92.703	ENSFCAG00000028270	PABPC4L	100	92.703	Felis_catus
ENSEASG00005007883	PABPC4L	100	79.459	ENSFDAG00000019606	PABPC4L	100	79.459	Fukomys_damarensis
ENSEASG00005007883	PABPC4L	99	89.702	ENSGGOG00000024991	PABPC4L	99	89.702	Gorilla_gorilla
ENSEASG00005007883	PABPC4L	100	80.270	ENSHGLG00000020104	PABPC4L	100	80.270	Heterocephalus_glaber_female
ENSEASG00005007883	PABPC4L	100	80.270	ENSHGLG00100020648	PABPC4L	100	80.270	Heterocephalus_glaber_male
ENSEASG00005007883	PABPC4L	99	85.135	ENSSTOG00000019472	PABPC4L	99	85.135	Ictidomys_tridecemlineatus
ENSEASG00005007883	PABPC4L	100	80.000	ENSJJAG00000004090	Pabpc4l	100	80.000	Jaculus_jaculus
ENSEASG00005007883	PABPC4L	99	79.404	ENSMAUG00000016313	Pabpc4l	99	79.404	Mesocricetus_auratus
ENSEASG00005007883	PABPC4L	99	89.160	ENSMICG00000029683	PABPC4L	99	89.160	Microcebus_murinus
ENSEASG00005007883	PABPC4L	99	81.030	ENSMOCG00000007551	Pabpc4l	99	81.030	Microtus_ochrogaster
ENSEASG00005007883	PABPC4L	99	79.070	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	80.000	Mus_caroli
ENSEASG00005007883	PABPC4L	99	79.651	ENSMUSG00000090919	Pabpc4l	100	80.000	Mus_musculus
ENSEASG00005007883	PABPC4L	99	80.233	MGP_PahariEiJ_G0026409	Pabpc4l	100	80.233	Mus_pahari
ENSEASG00005007883	PABPC4L	99	79.070	MGP_SPRETEiJ_G0025903	Pabpc4l	100	80.000	Mus_spretus
ENSEASG00005007883	PABPC4L	99	81.843	ENSMLUG00000008254	PABPC4L	99	81.843	Myotis_lucifugus
ENSEASG00005007883	PABPC4L	99	84.011	ENSNGAG00000001502	Pabpc4l	99	84.011	Nannospalax_galili
ENSEASG00005007883	PABPC4L	99	89.973	ENSNLEG00000019300	PABPC4L	99	89.973	Nomascus_leucogenys
ENSEASG00005007883	PABPC4L	99	82.656	ENSOGAG00000026166	PABPC4L	99	82.656	Otolemur_garnettii
ENSEASG00005007883	PABPC4L	99	90.402	ENSPPAG00000043745	PABPC4L	93	90.402	Pan_paniscus
ENSEASG00005007883	PABPC4L	100	92.162	ENSPPRG00000018628	PABPC4L	100	92.162	Panthera_pardus
ENSEASG00005007883	PABPC4L	100	92.703	ENSPTIG00000010106	PABPC4L	100	92.703	Panthera_tigris_altaica
ENSEASG00005007883	PABPC4L	99	90.402	ENSPTRG00000045513	-	79	90.402	Pan_troglodytes
ENSEASG00005007883	PABPC4L	99	80.217	ENSPEMG00000012565	Pabpc4l	99	80.217	Peromyscus_maniculatus_bairdii
ENSEASG00005007883	PABPC4L	99	89.160	ENSPCOG00000025578	PABPC4L	99	89.160	Propithecus_coquereli
ENSEASG00005007883	PABPC4L	99	78.320	ENSRNOG00000029749	Pabpc4l	99	78.320	Rattus_norvegicus
ENSEASG00005007883	PABPC4L	99	86.992	ENSRBIG00000030229	PABPC4L	99	86.992	Rhinopithecus_bieti
ENSEASG00005007883	PABPC4L	99	86.721	ENSRROG00000020367	PABPC4L	99	86.721	Rhinopithecus_roxellana
ENSEASG00005007883	PABPC4L	99	86.179	ENSSBOG00000016382	PABPC4L	99	86.179	Saimiri_boliviensis_boliviensis
ENSEASG00005007883	PABPC4L	100	86.757	ENSSSCG00000009067	PABPC4L	100	86.757	Sus_scrofa
ENSEASG00005007883	PABPC4L	100	92.162	ENSUAMG00000001289	PABPC4L	100	92.162	Ursus_americanus
ENSEASG00005007883	PABPC4L	100	92.162	ENSUMAG00000014887	PABPC4L	100	92.162	Ursus_maritimus
ENSEASG00005007883	PABPC4L	89	76.829	ENSVVUG00000011060	-	75	76.829	Vulpes_vulpes