EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005008443 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 82244 bases
Position: chrPSZQ01007001.1:32262274-32344517
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005012084	RRM_1	PF00076.22	6.4e-38	1	3
ENSEASP00005012084	RRM_1	PF00076.22	6.4e-38	2	3
ENSEASP00005012084	RRM_1	PF00076.22	6.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005013128	RBM47-201	2017	-	ENSEASP00005012084	591 (aa)	-	UPI0004BDFA2B

Gene Model

Click here to download ENSEASG00005008443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005008443's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005008443	RBM47	51	74.333	ENSEASG00005015821	RBM46	56	74.333
ENSEASG00005008443	RBM47	73	58.425	ENSEASG00005012924	A1CF	74	58.370
ENSEASG00005008443	RBM47	50	55.482	ENSEASG00005005616	SYNCRIP	79	46.292
ENSEASG00005008443	RBM47	52	56.129	ENSEASG00005005231	HNRNPR	71	45.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005008443	RBM47	100	96.975	ENSG00000163694	RBM47	100	98.618	Homo_sapiens
ENSEASG00005008443	RBM47	100	77.759	ENSAPOG00000011062	rbm47	93	85.393	Acanthochromis_polyacanthus
ENSEASG00005008443	RBM47	100	96.817	ENSAMEG00000009672	RBM47	100	96.817	Ailuropoda_melanoleuca
ENSEASG00005008443	RBM47	100	77.517	ENSACIG00000011531	rbm47	100	76.678	Amphilophus_citrinellus
ENSEASG00005008443	RBM47	100	78.319	ENSAOCG00000022245	rbm47	93	85.393	Amphiprion_ocellaris
ENSEASG00005008443	RBM47	100	78.319	ENSAPEG00000018304	rbm47	93	85.393	Amphiprion_percula
ENSEASG00005008443	RBM47	100	77.377	ENSATEG00000018400	rbm47	94	78.472	Anabas_testudineus
ENSEASG00005008443	RBM47	100	88.196	ENSAPLG00000013974	RBM47	100	87.858	Anas_platyrhynchos
ENSEASG00005008443	RBM47	100	85.833	ENSACAG00000011833	RBM47	100	85.667	Anolis_carolinensis
ENSEASG00005008443	RBM47	100	96.639	ENSANAG00000029440	RBM47	100	96.639	Aotus_nancymaae
ENSEASG00005008443	RBM47	100	76.432	ENSACLG00000016902	rbm47	94	85.955	Astatotilapia_calliptera
ENSEASG00005008443	RBM47	100	75.698	ENSAMXG00000021794	rbm47	95	77.643	Astyanax_mexicanus
ENSEASG00005008443	RBM47	100	98.646	ENSBTAG00000002356	RBM47	100	98.646	Bos_taurus
ENSEASG00005008443	RBM47	100	96.309	ENSCJAG00000019385	RBM47	100	96.309	Callithrix_jacchus
ENSEASG00005008443	RBM47	96	95.263	ENSCAFG00000015898	RBM47	100	93.603	Canis_familiaris
ENSEASG00005008443	RBM47	87	96.117	ENSCAFG00020010558	RBM47	94	93.651	Canis_lupus_dingo
ENSEASG00005008443	RBM47	100	98.985	ENSCHIG00000026214	RBM47	100	98.985	Capra_hircus
ENSEASG00005008443	RBM47	90	84.146	ENSTSYG00000033612	RBM47	92	89.381	Carlito_syrichta
ENSEASG00005008443	RBM47	100	88.870	ENSCAPG00000008426	RBM47	100	88.196	Cavia_aperea
ENSEASG00005008443	RBM47	100	96.627	ENSCPOG00000014100	RBM47	100	96.627	Cavia_porcellus
ENSEASG00005008443	RBM47	99	67.172	ENSCCAG00000024397	-	99	65.365	Cebus_capucinus
ENSEASG00005008443	RBM47	100	96.309	ENSCCAG00000030129	-	100	96.309	Cebus_capucinus
ENSEASG00005008443	RBM47	100	97.462	ENSCATG00000042064	RBM47	100	97.462	Cercocebus_atys
ENSEASG00005008443	RBM47	100	96.453	ENSCLAG00000001684	RBM47	100	96.453	Chinchilla_lanigera
ENSEASG00005008443	RBM47	100	97.143	ENSCSAG00000017060	RBM47	100	97.143	Chlorocebus_sabaeus
ENSEASG00005008443	RBM47	88	94.937	ENSCHOG00000011731	RBM47	88	94.937	Choloepus_hoffmanni
ENSEASG00005008443	RBM47	100	91.107	ENSCPBG00000013831	RBM47	100	90.772	Chrysemys_picta_bellii
ENSEASG00005008443	RBM47	100	97.293	ENSCANG00000019997	RBM47	100	97.293	Colobus_angolensis_palliatus
ENSEASG00005008443	RBM47	100	64.404	ENSCGRG00001020102	-	100	72.758	Cricetulus_griseus_chok1gshd
ENSEASG00005008443	RBM47	100	92.450	ENSCGRG00001000623	-	100	91.946	Cricetulus_griseus_chok1gshd
ENSEASG00005008443	RBM47	100	91.611	ENSCGRG00000007762	-	100	93.038	Cricetulus_griseus_crigri
ENSEASG00005008443	RBM47	100	64.073	ENSCGRG00000014760	-	100	72.420	Cricetulus_griseus_crigri
ENSEASG00005008443	RBM47	100	75.920	ENSCSEG00000004545	rbm47	100	73.658	Cynoglossus_semilaevis
ENSEASG00005008443	RBM47	100	76.471	ENSCVAG00000020144	rbm47	93	85.634	Cyprinodon_variegatus
ENSEASG00005008443	RBM47	100	76.936	ENSDARG00000061985	rbm47	95	78.397	Danio_rerio
ENSEASG00005008443	RBM47	100	96.785	ENSDNOG00000046854	RBM47	100	96.785	Dasypus_novemcinctus
ENSEASG00005008443	RBM47	100	94.975	ENSDORG00000010144	Rbm47	100	94.472	Dipodomys_ordii
ENSEASG00005008443	RBM47	100	95.134	ENSETEG00000009194	RBM47	100	95.134	Echinops_telfairi
ENSEASG00005008443	RBM47	99	57.450	ENSEBUG00000011912	rbm47	95	59.826	Eptatretus_burgeri
ENSEASG00005008443	RBM47	100	100.000	ENSECAG00000004400	RBM47	100	100.000	Equus_caballus
ENSEASG00005008443	RBM47	75	96.537	ENSEEUG00000001194	RBM47	75	96.537	Erinaceus_europaeus
ENSEASG00005008443	RBM47	99	75.879	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSEASG00005008443	RBM47	100	98.816	ENSFCAG00000012399	RBM47	100	98.816	Felis_catus
ENSEASG00005008443	RBM47	100	90.924	ENSFALG00000002861	RBM47	100	90.924	Ficedula_albicollis
ENSEASG00005008443	RBM47	100	94.088	ENSFDAG00000016326	RBM47	100	92.568	Fukomys_damarensis
ENSEASG00005008443	RBM47	100	77.517	ENSFHEG00000007938	rbm47	100	75.336	Fundulus_heteroclitus
ENSEASG00005008443	RBM47	100	74.472	ENSGMOG00000014802	rbm47	94	76.562	Gadus_morhua
ENSEASG00005008443	RBM47	64	92.021	ENSGALG00000014267	RBM47	99	92.021	Gallus_gallus
ENSEASG00005008443	RBM47	64	82.979	ENSGAFG00000020571	rbm47	98	81.167	Gambusia_affinis
ENSEASG00005008443	RBM47	100	74.020	ENSGACG00000016223	rbm47	93	83.708	Gasterosteus_aculeatus
ENSEASG00005008443	RBM47	100	91.275	ENSGAGG00000020051	RBM47	100	90.940	Gopherus_agassizii
ENSEASG00005008443	RBM47	100	97.462	ENSGGOG00000001367	RBM47	100	97.462	Gorilla_gorilla
ENSEASG00005008443	RBM47	100	76.183	ENSHBUG00000003520	rbm47	94	85.955	Haplochromis_burtoni
ENSEASG00005008443	RBM47	84	91.057	ENSHGLG00000016914	RBM47	100	94.937	Heterocephalus_glaber_female
ENSEASG00005008443	RBM47	100	95.270	ENSHGLG00100014028	-	100	95.270	Heterocephalus_glaber_male
ENSEASG00005008443	RBM47	100	85.279	ENSHGLG00100003071	-	100	83.926	Heterocephalus_glaber_male
ENSEASG00005008443	RBM47	99	76.884	ENSHCOG00000002074	rbm47	93	83.427	Hippocampus_comes
ENSEASG00005008443	RBM47	100	78.151	ENSIPUG00000004743	rbm47	97	78.984	Ictalurus_punctatus
ENSEASG00005008443	RBM47	100	96.980	ENSSTOG00000004727	RBM47	100	96.980	Ictidomys_tridecemlineatus
ENSEASG00005008443	RBM47	100	94.975	ENSJJAG00000013823	Rbm47	100	94.975	Jaculus_jaculus
ENSEASG00005008443	RBM47	100	78.392	ENSKMAG00000000084	rbm47	93	83.989	Kryptolebias_marmoratus
ENSEASG00005008443	RBM47	100	76.678	ENSLBEG00000008436	rbm47	93	81.742	Labrus_bergylta
ENSEASG00005008443	RBM47	100	85.546	ENSLACG00000007196	RBM47	100	83.866	Latimeria_chalumnae
ENSEASG00005008443	RBM47	100	82.521	ENSLOCG00000012966	rbm47	95	80.504	Lepisosteus_oculatus
ENSEASG00005008443	RBM47	100	95.966	ENSLAFG00000011998	RBM47	100	95.966	Loxodonta_africana
ENSEASG00005008443	RBM47	100	97.462	ENSMFAG00000037967	RBM47	100	97.462	Macaca_fascicularis
ENSEASG00005008443	RBM47	100	97.143	ENSMMUG00000012036	RBM47	100	98.446	Macaca_mulatta
ENSEASG00005008443	RBM47	100	97.462	ENSMNEG00000040774	RBM47	100	97.462	Macaca_nemestrina
ENSEASG00005008443	RBM47	100	99.048	ENSMLEG00000041432	RBM47	100	99.048	Mandrillus_leucophaeus
ENSEASG00005008443	RBM47	100	76.847	ENSMAMG00000019143	rbm47	94	82.181	Mastacembelus_armatus
ENSEASG00005008443	RBM47	100	76.432	ENSMZEG00005023659	rbm47	95	77.893	Maylandia_zebra
ENSEASG00005008443	RBM47	100	90.301	ENSMGAG00000012226	RBM47	100	89.799	Meleagris_gallopavo
ENSEASG00005008443	RBM47	100	93.109	ENSMAUG00000006493	Rbm47	100	93.899	Mesocricetus_auratus
ENSEASG00005008443	RBM47	100	89.848	ENSMICG00000026417	RBM47	100	91.540	Microcebus_murinus
ENSEASG00005008443	RBM47	100	93.771	ENSMOCG00000021170	Rbm47	100	94.937	Microtus_ochrogaster
ENSEASG00005008443	RBM47	100	76.721	ENSMMOG00000007260	rbm47	95	77.123	Mola_mola
ENSEASG00005008443	RBM47	100	91.737	ENSMODG00000007003	RBM47	100	91.568	Monodelphis_domestica
ENSEASG00005008443	RBM47	100	82.064	ENSMODG00000020561	-	97	82.487	Monodelphis_domestica
ENSEASG00005008443	RBM47	52	82.051	ENSMODG00000015426	-	97	79.743	Monodelphis_domestica
ENSEASG00005008443	RBM47	100	77.554	ENSMALG00000005167	rbm47	94	85.393	Monopterus_albus
ENSEASG00005008443	RBM47	100	93.423	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.423	Mus_caroli
ENSEASG00005008443	RBM47	100	93.761	ENSMUSG00000070780	Rbm47	100	93.761	Mus_musculus
ENSEASG00005008443	RBM47	100	93.761	MGP_PahariEiJ_G0017040	Rbm47	100	93.761	Mus_pahari
ENSEASG00005008443	RBM47	100	94.078	MGP_SPRETEiJ_G0028253	Rbm47	100	94.149	Mus_spretus
ENSEASG00005008443	RBM47	100	97.811	ENSMPUG00000006177	RBM47	94	97.811	Mustela_putorius_furo
ENSEASG00005008443	RBM47	100	94.595	ENSMLUG00000000889	RBM47	100	94.257	Myotis_lucifugus
ENSEASG00005008443	RBM47	100	93.445	ENSNGAG00000003325	Rbm47	100	93.613	Nannospalax_galili
ENSEASG00005008443	RBM47	100	76.307	ENSNBRG00000015092	rbm47	95	77.931	Neolamprologus_brichardi
ENSEASG00005008443	RBM47	100	97.124	ENSNLEG00000017151	RBM47	100	97.124	Nomascus_leucogenys
ENSEASG00005008443	RBM47	72	87.150	ENSMEUG00000009516	-	99	87.294	Notamacropus_eugenii
ENSEASG00005008443	RBM47	75	96.694	ENSOPRG00000016507	-	75	96.694	Ochotona_princeps
ENSEASG00005008443	RBM47	100	97.297	ENSODEG00000004873	RBM47	100	97.297	Octodon_degus
ENSEASG00005008443	RBM47	100	76.432	ENSONIG00000009061	rbm47	94	77.778	Oreochromis_niloticus
ENSEASG00005008443	RBM47	100	87.124	ENSOANG00000008978	RBM47	100	88.294	Ornithorhynchus_anatinus
ENSEASG00005008443	RBM47	100	96.959	ENSOCUG00000012034	RBM47	100	96.959	Oryctolagus_cuniculus
ENSEASG00005008443	RBM47	100	77.852	ENSORLG00000005847	rbm47	94	84.831	Oryzias_latipes
ENSEASG00005008443	RBM47	100	78.020	ENSORLG00020005154	rbm47	94	84.831	Oryzias_latipes_hni
ENSEASG00005008443	RBM47	100	78.356	ENSORLG00015000066	rbm47	94	85.112	Oryzias_latipes_hsok
ENSEASG00005008443	RBM47	100	79.195	ENSOMEG00000010730	rbm47	100	76.846	Oryzias_melastigma
ENSEASG00005008443	RBM47	100	88.156	ENSOGAG00000025193	-	100	87.479	Otolemur_garnettii
ENSEASG00005008443	RBM47	100	97.138	ENSOGAG00000029367	-	100	97.138	Otolemur_garnettii
ENSEASG00005008443	RBM47	100	90.017	ENSOARG00000012711	RBM47	100	90.017	Ovis_aries
ENSEASG00005008443	RBM47	100	97.293	ENSPPAG00000029763	RBM47	100	97.293	Pan_paniscus
ENSEASG00005008443	RBM47	100	95.431	ENSPPRG00000012873	RBM47	100	95.431	Panthera_pardus
ENSEASG00005008443	RBM47	85	94.422	ENSPTIG00000017046	RBM47	100	94.422	Panthera_tigris_altaica
ENSEASG00005008443	RBM47	100	97.462	ENSPTRG00000016006	RBM47	100	97.462	Pan_troglodytes
ENSEASG00005008443	RBM47	100	97.462	ENSPANG00000005980	RBM47	100	97.462	Papio_anubis
ENSEASG00005008443	RBM47	96	76.215	ENSPKIG00000013431	RBM47	92	84.789	Paramormyrops_kingsleyae
ENSEASG00005008443	RBM47	96	77.836	ENSPKIG00000005037	rbm47	95	77.138	Paramormyrops_kingsleyae
ENSEASG00005008443	RBM47	89	91.477	ENSPSIG00000017516	RBM47	97	91.477	Pelodiscus_sinensis
ENSEASG00005008443	RBM47	100	76.174	ENSPMGG00000018540	rbm47	100	74.832	Periophthalmus_magnuspinnatus
ENSEASG00005008443	RBM47	100	93.950	ENSPEMG00000011088	Rbm47	100	94.118	Peromyscus_maniculatus_bairdii
ENSEASG00005008443	RBM47	100	76.423	ENSPFOG00000007997	rbm47	94	77.336	Poecilia_formosa
ENSEASG00005008443	RBM47	100	76.221	ENSPLAG00000002072	rbm47	100	81.383	Poecilia_latipinna
ENSEASG00005008443	RBM47	100	78.297	ENSPMEG00000017492	rbm47	93	84.789	Poecilia_mexicana
ENSEASG00005008443	RBM47	96	79.723	ENSPREG00000008456	rbm47	100	81.649	Poecilia_reticulata
ENSEASG00005008443	RBM47	98	82.095	ENSPPYG00000014688	RBM47	98	81.304	Pongo_abelii
ENSEASG00005008443	RBM47	81	97.257	ENSPCAG00000011879	RBM47	81	97.257	Procavia_capensis
ENSEASG00005008443	RBM47	100	92.724	ENSPCOG00000023451	RBM47	100	92.386	Propithecus_coquereli
ENSEASG00005008443	RBM47	100	97.138	ENSPVAG00000003812	RBM47	100	97.138	Pteropus_vampyrus
ENSEASG00005008443	RBM47	100	75.896	ENSPNYG00000022868	rbm47	95	77.320	Pundamilia_nyererei
ENSEASG00005008443	RBM47	100	76.355	ENSPNAG00000007940	rbm47	95	78.163	Pygocentrus_nattereri
ENSEASG00005008443	RBM47	100	93.761	ENSRNOG00000002408	Rbm47	100	93.761	Rattus_norvegicus
ENSEASG00005008443	RBM47	100	97.293	ENSRBIG00000039601	RBM47	100	97.293	Rhinopithecus_bieti
ENSEASG00005008443	RBM47	100	97.293	ENSRROG00000044696	RBM47	100	97.293	Rhinopithecus_roxellana
ENSEASG00005008443	RBM47	100	93.063	ENSSBOG00000028475	RBM47	100	96.907	Saimiri_boliviensis_boliviensis
ENSEASG00005008443	RBM47	100	92.893	ENSSHAG00000017576	RBM47	100	92.893	Sarcophilus_harrisii
ENSEASG00005008443	RBM47	100	75.209	ENSSFOG00015024101	RBM47	97	76.256	Scleropages_formosus
ENSEASG00005008443	RBM47	100	73.510	ENSSFOG00015012445	rbm47	94	74.606	Scleropages_formosus
ENSEASG00005008443	RBM47	100	75.450	ENSSMAG00000009744	rbm47	94	83.427	Scophthalmus_maximus
ENSEASG00005008443	RBM47	100	79.027	ENSSDUG00000022684	rbm47	100	77.349	Seriola_dumerili
ENSEASG00005008443	RBM47	100	79.362	ENSSLDG00000003109	rbm47	92	85.634	Seriola_lalandi_dorsalis
ENSEASG00005008443	RBM47	85	96.205	ENSSARG00000001735	RBM47	75	96.205	Sorex_araneus
ENSEASG00005008443	RBM47	100	88.235	ENSSPUG00000007515	RBM47	100	88.830	Sphenodon_punctatus
ENSEASG00005008443	RBM47	100	79.362	ENSSPAG00000001257	rbm47	93	86.236	Stegastes_partitus
ENSEASG00005008443	RBM47	100	98.477	ENSSSCG00000008796	RBM47	100	98.477	Sus_scrofa
ENSEASG00005008443	RBM47	100	90.404	ENSTGUG00000008705	RBM47	100	90.404	Taeniopygia_guttata
ENSEASG00005008443	RBM47	100	76.510	ENSTRUG00000014050	rbm47	100	73.826	Takifugu_rubripes
ENSEASG00005008443	RBM47	100	76.519	ENSTNIG00000006127	rbm47	95	76.910	Tetraodon_nigroviridis
ENSEASG00005008443	RBM47	77	92.405	ENSTBEG00000001607	RBM47	76	92.405	Tupaia_belangeri
ENSEASG00005008443	RBM47	100	97.631	ENSTTRG00000002839	RBM47	100	97.631	Tursiops_truncatus
ENSEASG00005008443	RBM47	100	97.643	ENSUAMG00000021346	RBM47	100	97.643	Ursus_americanus
ENSEASG00005008443	RBM47	57	99.315	ENSVPAG00000000641	-	57	99.315	Vicugna_pacos
ENSEASG00005008443	RBM47	96	95.782	ENSVVUG00000014774	RBM47	100	94.604	Vulpes_vulpes
ENSEASG00005008443	RBM47	100	86.172	ENSXETG00000012802	rbm47	100	85.666	Xenopus_tropicalis
ENSEASG00005008443	RBM47	88	82.713	ENSXCOG00000000780	rbm47	100	81.117	Xiphophorus_couchianus
ENSEASG00005008443	RBM47	100	77.349	ENSXMAG00000009874	rbm47	93	84.507	Xiphophorus_maculatus