EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005008472 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 13164 bases
Position: chrPSZQ01006077.1:1337919-1351082
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005012137	zf-C2H2	PF00096.26	1.1e-12	1	2
ENSEASP00005012137	zf-C2H2	PF00096.26	1.1e-12	2	2
ENSEASP00005012137	zf-met	PF12874.7	9.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005013184	PRDM12-201	1089	-	ENSEASP00005012137	362 (aa)	-	-

Gene Model

Click here to download ENSEASG00005008472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005008472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005008472	PRDM12	66	42.353	ENSEASG00005018365	PRDM5	94	42.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005008472	PRDM12	100	97.275	ENSG00000130711	PRDM12	100	97.275	Homo_sapiens
ENSEASG00005008472	PRDM12	99	75.000	ENSAPOG00000016051	prdm12b	94	78.056	Acanthochromis_polyacanthus
ENSEASG00005008472	PRDM12	99	63.934	ENSAPOG00000018234	-	97	65.634	Acanthochromis_polyacanthus
ENSEASG00005008472	PRDM12	89	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSEASG00005008472	PRDM12	99	75.000	ENSACIG00000019578	prdm12b	94	78.873	Amphilophus_citrinellus
ENSEASG00005008472	PRDM12	99	75.648	ENSACIG00000005193	-	96	77.961	Amphilophus_citrinellus
ENSEASG00005008472	PRDM12	99	76.316	ENSAOCG00000015040	prdm12b	94	79.494	Amphiprion_ocellaris
ENSEASG00005008472	PRDM12	99	76.923	ENSAPEG00000015092	prdm12b	94	80.170	Amphiprion_percula
ENSEASG00005008472	PRDM12	100	71.875	ENSAPEG00000022849	-	88	78.529	Amphiprion_percula
ENSEASG00005008472	PRDM12	93	80.994	ENSATEG00000014595	-	99	80.994	Anabas_testudineus
ENSEASG00005008472	PRDM12	94	99.118	ENSANAG00000020616	PRDM12	100	99.118	Aotus_nancymaae
ENSEASG00005008472	PRDM12	99	73.858	ENSACLG00000007631	-	89	80.229	Astatotilapia_calliptera
ENSEASG00005008472	PRDM12	99	78.202	ENSACLG00000011876	prdm12b	94	81.287	Astatotilapia_calliptera
ENSEASG00005008472	PRDM12	99	78.261	ENSAMXG00000008540	PRDM12	93	83.284	Astyanax_mexicanus
ENSEASG00005008472	PRDM12	99	82.432	ENSAMXG00000033665	prdm12b	94	86.533	Astyanax_mexicanus
ENSEASG00005008472	PRDM12	100	99.171	ENSBTAG00000023797	PRDM12	100	99.171	Bos_taurus
ENSEASG00005008472	PRDM12	100	98.619	ENSCJAG00000020540	PRDM12	100	98.619	Callithrix_jacchus
ENSEASG00005008472	PRDM12	88	97.819	ENSCAFG00000023076	PRDM12	99	97.819	Canis_familiaris
ENSEASG00005008472	PRDM12	100	98.901	ENSCAFG00020024046	PRDM12	100	98.901	Canis_lupus_dingo
ENSEASG00005008472	PRDM12	100	99.448	ENSCHIG00000025005	PRDM12	100	99.448	Capra_hircus
ENSEASG00005008472	PRDM12	93	93.155	ENSCPOG00000005901	PRDM12	99	93.155	Cavia_porcellus
ENSEASG00005008472	PRDM12	100	98.623	ENSCCAG00000037485	PRDM12	100	98.623	Cebus_capucinus
ENSEASG00005008472	PRDM12	100	98.623	ENSCATG00000020327	PRDM12	100	98.623	Cercocebus_atys
ENSEASG00005008472	PRDM12	92	98.204	ENSCLAG00000005499	PRDM12	92	98.204	Chinchilla_lanigera
ENSEASG00005008472	PRDM12	100	98.352	ENSCSAG00000014756	PRDM12	100	98.352	Chlorocebus_sabaeus
ENSEASG00005008472	PRDM12	100	90.055	ENSCPBG00000022628	PRDM12	96	93.235	Chrysemys_picta_bellii
ENSEASG00005008472	PRDM12	100	97.541	ENSCGRG00001015005	Prdm12	100	97.541	Cricetulus_griseus_chok1gshd
ENSEASG00005008472	PRDM12	99	72.308	ENSCVAG00000000944	-	91	77.401	Cyprinodon_variegatus
ENSEASG00005008472	PRDM12	99	77.358	ENSCVAG00000017166	prdm12b	95	80.627	Cyprinodon_variegatus
ENSEASG00005008472	PRDM12	99	82.480	ENSDARG00000007430	prdm12b	95	85.549	Danio_rerio
ENSEASG00005008472	PRDM12	99	97.796	ENSDNOG00000042302	PRDM12	99	97.796	Dasypus_novemcinctus
ENSEASG00005008472	PRDM12	89	62.678	ENSEBUG00000016780	prdm12b	78	64.103	Eptatretus_burgeri
ENSEASG00005008472	PRDM12	100	99.724	ENSECAG00000005933	PRDM12	100	99.724	Equus_caballus
ENSEASG00005008472	PRDM12	99	77.008	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSEASG00005008472	PRDM12	99	79.733	ENSELUG00000009905	prdm12b	95	83.191	Esox_lucius
ENSEASG00005008472	PRDM12	100	99.174	ENSFCAG00000043086	PRDM12	100	99.174	Felis_catus
ENSEASG00005008472	PRDM12	100	90.055	ENSFALG00000001445	PRDM12	86	93.235	Ficedula_albicollis
ENSEASG00005008472	PRDM12	99	77.005	ENSFHEG00000003944	prdm12b	95	80.226	Fundulus_heteroclitus
ENSEASG00005008472	PRDM12	99	74.103	ENSFHEG00000007746	-	89	79.592	Fundulus_heteroclitus
ENSEASG00005008472	PRDM12	92	82.282	ENSGMOG00000011797	prdm12b	96	81.176	Gadus_morhua
ENSEASG00005008472	PRDM12	100	90.055	ENSGALG00000003895	PRDM12	96	93.235	Gallus_gallus
ENSEASG00005008472	PRDM12	100	77.067	ENSGAFG00000010827	prdm12b	93	81.429	Gambusia_affinis
ENSEASG00005008472	PRDM12	100	78.191	ENSGACG00000016713	prdm12b	94	81.662	Gasterosteus_aculeatus
ENSEASG00005008472	PRDM12	100	90.331	ENSGAGG00000014083	PRDM12	96	93.529	Gopherus_agassizii
ENSEASG00005008472	PRDM12	100	97.268	ENSGGOG00000010568	PRDM12	100	97.268	Gorilla_gorilla
ENSEASG00005008472	PRDM12	99	73.858	ENSHBUG00000022537	-	82	80.229	Haplochromis_burtoni
ENSEASG00005008472	PRDM12	99	76.720	ENSHBUG00000022878	prdm12b	94	79.603	Haplochromis_burtoni
ENSEASG00005008472	PRDM12	100	96.438	ENSHGLG00000013939	PRDM12	100	96.438	Heterocephalus_glaber_female
ENSEASG00005008472	PRDM12	99	73.370	ENSHCOG00000021167	-	95	76.246	Hippocampus_comes
ENSEASG00005008472	PRDM12	90	81.287	ENSHCOG00000003663	prdm12b	93	78.512	Hippocampus_comes
ENSEASG00005008472	PRDM12	99	82.480	ENSIPUG00000017053	prdm12b	94	85.591	Ictalurus_punctatus
ENSEASG00005008472	PRDM12	99	76.164	ENSIPUG00000019544	PRDM12	94	79.300	Ictalurus_punctatus
ENSEASG00005008472	PRDM12	99	95.278	ENSSTOG00000005986	PRDM12	88	99.112	Ictidomys_tridecemlineatus
ENSEASG00005008472	PRDM12	91	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSEASG00005008472	PRDM12	90	78.492	ENSKMAG00000016921	prdm12b	93	76.000	Kryptolebias_marmoratus
ENSEASG00005008472	PRDM12	99	76.374	ENSKMAG00000021205	-	96	79.240	Kryptolebias_marmoratus
ENSEASG00005008472	PRDM12	99	77.513	ENSLBEG00000017769	prdm12b	92	81.375	Labrus_bergylta
ENSEASG00005008472	PRDM12	99	75.457	ENSLBEG00000007776	-	96	77.473	Labrus_bergylta
ENSEASG00005008472	PRDM12	99	87.535	ENSLACG00000017560	PRDM12	96	90.560	Latimeria_chalumnae
ENSEASG00005008472	PRDM12	99	82.289	ENSLOCG00000005429	prdm12b	94	86.006	Lepisosteus_oculatus
ENSEASG00005008472	PRDM12	98	96.389	ENSLAFG00000006979	PRDM12	97	96.389	Loxodonta_africana
ENSEASG00005008472	PRDM12	100	96.185	ENSMFAG00000040322	PRDM12	100	96.185	Macaca_fascicularis
ENSEASG00005008472	PRDM12	100	98.623	ENSMNEG00000037234	PRDM12	100	98.623	Macaca_nemestrina
ENSEASG00005008472	PRDM12	99	76.640	ENSMAMG00000013212	prdm12b	94	80.682	Mastacembelus_armatus
ENSEASG00005008472	PRDM12	90	81.250	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSEASG00005008472	PRDM12	99	73.485	ENSMZEG00005000415	PRDM12	88	80.229	Maylandia_zebra
ENSEASG00005008472	PRDM12	98	90.449	ENSMGAG00000005438	PRDM12	96	93.235	Meleagris_gallopavo
ENSEASG00005008472	PRDM12	100	96.164	ENSMAUG00000013040	Prdm12	100	96.164	Mesocricetus_auratus
ENSEASG00005008472	PRDM12	100	98.343	ENSMICG00000015480	PRDM12	100	98.343	Microcebus_murinus
ENSEASG00005008472	PRDM12	98	95.763	ENSMOCG00000021026	Prdm12	93	98.538	Microtus_ochrogaster
ENSEASG00005008472	PRDM12	100	91.989	ENSMODG00000012108	PRDM12	96	95.294	Monodelphis_domestica
ENSEASG00005008472	PRDM12	99	66.400	ENSMALG00000021901	prdm12b	93	68.966	Monopterus_albus
ENSEASG00005008472	PRDM12	100	97.534	MGP_CAROLIEiJ_G0023414	Prdm12	100	97.534	Mus_caroli
ENSEASG00005008472	PRDM12	100	97.534	ENSMUSG00000079466	Prdm12	100	97.534	Mus_musculus
ENSEASG00005008472	PRDM12	100	97.534	MGP_PahariEiJ_G0024871	Prdm12	100	97.534	Mus_pahari
ENSEASG00005008472	PRDM12	100	97.534	MGP_SPRETEiJ_G0024331	Prdm12	100	97.534	Mus_spretus
ENSEASG00005008472	PRDM12	100	95.304	ENSNGAG00000018480	Prdm12	100	95.304	Nannospalax_galili
ENSEASG00005008472	PRDM12	99	72.849	ENSNBRG00000024312	-	97	75.645	Neolamprologus_brichardi
ENSEASG00005008472	PRDM12	99	75.591	ENSNBRG00000006727	prdm12b	94	78.933	Neolamprologus_brichardi
ENSEASG00005008472	PRDM12	100	81.768	ENSMEUG00000003828	PRDM12	96	84.412	Notamacropus_eugenii
ENSEASG00005008472	PRDM12	91	98.788	ENSOPRG00000008680	PRDM12	100	98.788	Ochotona_princeps
ENSEASG00005008472	PRDM12	95	98.251	ENSODEG00000016282	PRDM12	64	98.251	Octodon_degus
ENSEASG00005008472	PRDM12	62	90.222	ENSOANG00000001043	PRDM12	94	96.059	Ornithorhynchus_anatinus
ENSEASG00005008472	PRDM12	86	93.930	ENSOCUG00000008241	PRDM12	100	93.930	Oryctolagus_cuniculus
ENSEASG00005008472	PRDM12	100	75.989	ENSORLG00000007114	prdm12b	94	79.609	Oryzias_latipes
ENSEASG00005008472	PRDM12	99	73.333	ENSORLG00000017558	-	89	79.023	Oryzias_latipes
ENSEASG00005008472	PRDM12	99	73.146	ENSORLG00020013167	-	89	78.797	Oryzias_latipes_hni
ENSEASG00005008472	PRDM12	91	80.692	ENSORLG00020019565	prdm12b	94	79.330	Oryzias_latipes_hni
ENSEASG00005008472	PRDM12	99	73.333	ENSORLG00015003435	-	89	79.023	Oryzias_latipes_hsok
ENSEASG00005008472	PRDM12	100	75.462	ENSORLG00015007621	prdm12b	94	79.050	Oryzias_latipes_hsok
ENSEASG00005008472	PRDM12	99	74.479	ENSOMEG00000007762	-	97	77.348	Oryzias_melastigma
ENSEASG00005008472	PRDM12	99	76.455	ENSOMEG00000004134	prdm12b	94	78.947	Oryzias_melastigma
ENSEASG00005008472	PRDM12	92	99.700	ENSOGAG00000007557	PRDM12	100	99.700	Otolemur_garnettii
ENSEASG00005008472	PRDM12	79	98.606	ENSPPAG00000031506	-	97	98.606	Pan_paniscus
ENSEASG00005008472	PRDM12	100	87.603	ENSPPRG00000023024	PRDM12	92	87.603	Panthera_pardus
ENSEASG00005008472	PRDM12	100	97.541	ENSPTRG00000021475	PRDM12	100	97.541	Pan_troglodytes
ENSEASG00005008472	PRDM12	100	97.541	ENSPTRG00000043324	-	100	97.541	Pan_troglodytes
ENSEASG00005008472	PRDM12	100	98.623	ENSPANG00000025967	PRDM12	100	98.623	Papio_anubis
ENSEASG00005008472	PRDM12	99	81.117	ENSPKIG00000007228	prdm12b	95	84.943	Paramormyrops_kingsleyae
ENSEASG00005008472	PRDM12	94	78.348	ENSPKIG00000004305	PRDM12	99	78.286	Paramormyrops_kingsleyae
ENSEASG00005008472	PRDM12	100	89.503	ENSPSIG00000006739	PRDM12	96	92.647	Pelodiscus_sinensis
ENSEASG00005008472	PRDM12	100	77.249	ENSPMGG00000008867	prdm12b	94	81.662	Periophthalmus_magnuspinnatus
ENSEASG00005008472	PRDM12	99	73.368	ENSPMGG00000002356	-	87	81.194	Periophthalmus_magnuspinnatus
ENSEASG00005008472	PRDM12	96	95.977	ENSPEMG00000009969	Prdm12	95	95.415	Peromyscus_maniculatus_bairdii
ENSEASG00005008472	PRDM12	100	92.265	ENSPCIG00000024119	PRDM12	96	95.588	Phascolarctos_cinereus
ENSEASG00005008472	PRDM12	99	78.284	ENSPFOG00000019841	prdm12b	94	81.429	Poecilia_formosa
ENSEASG00005008472	PRDM12	91	83.333	ENSPLAG00000016626	prdm12b	93	80.453	Poecilia_latipinna
ENSEASG00005008472	PRDM12	97	76.359	ENSPMEG00000016698	prdm12b	93	79.883	Poecilia_mexicana
ENSEASG00005008472	PRDM12	96	74.167	ENSPREG00000003211	-	93	76.627	Poecilia_reticulata
ENSEASG00005008472	PRDM12	91	83.186	ENSPREG00000015073	prdm12b	89	83.186	Poecilia_reticulata
ENSEASG00005008472	PRDM12	97	96.581	ENSPPYG00000019694	PRDM12	100	96.581	Pongo_abelii
ENSEASG00005008472	PRDM12	100	98.087	ENSPCOG00000022255	PRDM12	100	98.087	Propithecus_coquereli
ENSEASG00005008472	PRDM12	100	97.268	ENSPVAG00000001511	PRDM12	100	97.268	Pteropus_vampyrus
ENSEASG00005008472	PRDM12	99	76.053	ENSPNYG00000009607	prdm12b	94	78.873	Pundamilia_nyererei
ENSEASG00005008472	PRDM12	99	73.485	ENSPNYG00000013589	-	88	80.229	Pundamilia_nyererei
ENSEASG00005008472	PRDM12	99	83.424	ENSPNAG00000024532	prdm12b	94	87.032	Pygocentrus_nattereri
ENSEASG00005008472	PRDM12	99	74.731	ENSPNAG00000013396	PRDM12	92	78.198	Pygocentrus_nattereri
ENSEASG00005008472	PRDM12	100	97.534	ENSRNOG00000009218	Prdm12	100	97.534	Rattus_norvegicus
ENSEASG00005008472	PRDM12	88	99.369	ENSRBIG00000042712	PRDM12	96	92.837	Rhinopithecus_bieti
ENSEASG00005008472	PRDM12	89	99.377	ENSRROG00000043554	PRDM12	100	99.377	Rhinopithecus_roxellana
ENSEASG00005008472	PRDM12	100	91.460	ENSSHAG00000015972	PRDM12	96	94.721	Sarcophilus_harrisii
ENSEASG00005008472	PRDM12	99	74.036	ENSSMAG00000003754	prdm12b	90	80.342	Scophthalmus_maximus
ENSEASG00005008472	PRDM12	94	81.395	ENSSDUG00000019071	-	95	81.395	Seriola_dumerili
ENSEASG00005008472	PRDM12	99	75.515	ENSSDUG00000023498	prdm12b	94	78.670	Seriola_dumerili
ENSEASG00005008472	PRDM12	99	75.844	ENSSLDG00000009557	prdm12b	94	79.330	Seriola_lalandi_dorsalis
ENSEASG00005008472	PRDM12	99	78.788	ENSSLDG00000013562	-	97	81.818	Seriola_lalandi_dorsalis
ENSEASG00005008472	PRDM12	100	89.779	ENSSPUG00000013424	PRDM12	96	92.941	Sphenodon_punctatus
ENSEASG00005008472	PRDM12	99	66.580	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSEASG00005008472	PRDM12	99	76.115	ENSSPAG00000018824	prdm12b	94	79.272	Stegastes_partitus
ENSEASG00005008472	PRDM12	100	98.901	ENSSSCG00000005703	PRDM12	100	98.901	Sus_scrofa
ENSEASG00005008472	PRDM12	99	75.881	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSEASG00005008472	PRDM12	99	77.660	ENSTRUG00000018659	prdm12b	94	81.556	Takifugu_rubripes
ENSEASG00005008472	PRDM12	99	76.022	ENSTNIG00000005859	-	99	77.337	Tetraodon_nigroviridis
ENSEASG00005008472	PRDM12	99	77.984	ENSTNIG00000009020	prdm12b	93	81.897	Tetraodon_nigroviridis
ENSEASG00005008472	PRDM12	96	98.567	ENSUAMG00000009653	PRDM12	97	98.567	Ursus_americanus
ENSEASG00005008472	PRDM12	91	100.000	ENSVVUG00000027662	PRDM12	79	100.000	Vulpes_vulpes
ENSEASG00005008472	PRDM12	91	83.036	ENSXCOG00000002836	prdm12b	95	80.453	Xiphophorus_couchianus
ENSEASG00005008472	PRDM12	99	74.740	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus
ENSEASG00005008472	PRDM12	90	83.234	ENSXMAG00000005537	prdm12b	95	80.000	Xiphophorus_maculatus