EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005008684 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 5332 bases
Position: chrPSZQ01005575.1:1440502-1445833
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005012457	EXOSC1	PF10447.9	6.8e-13	1	1
ENSEASP00005012453	EXOSC1	PF10447.9	0.00014	1	1
ENSEASP00005012453	ECR1_N	PF14382.6	6e-09	1	1
ENSEASP00005012457	ECR1_N	PF14382.6	6.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005013524	EXOSC1-202	567	-	ENSEASP00005012457	188 (aa)	-	-
ENSEAST00005013520	EXOSC1-201	474	-	ENSEASP00005012453	157 (aa)	-	-

Gene Model

Click here to download ENSEASG00005008684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005008684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005008684	EXOSC1	100	88.298	ENSG00000171311	EXOSC1	100	88.298	Homo_sapiens
ENSEASG00005008684	EXOSC1	98	71.204	ENSAPOG00000007822	exosc1	98	71.204	Acanthochromis_polyacanthus
ENSEASG00005008684	EXOSC1	100	88.718	ENSAMEG00000000129	EXOSC1	100	88.718	Ailuropoda_melanoleuca
ENSEASG00005008684	EXOSC1	96	70.213	ENSACIG00000018956	exosc1	92	70.213	Amphilophus_citrinellus
ENSEASG00005008684	EXOSC1	98	71.204	ENSAOCG00000010699	exosc1	98	71.204	Amphiprion_ocellaris
ENSEASG00005008684	EXOSC1	91	60.894	ENSAPEG00000012690	exosc1	96	60.894	Amphiprion_percula
ENSEASG00005008684	EXOSC1	98	70.681	ENSATEG00000018683	exosc1	98	70.681	Anabas_testudineus
ENSEASG00005008684	EXOSC1	99	77.202	ENSACAG00000002101	EXOSC1	99	77.202	Anolis_carolinensis
ENSEASG00005008684	EXOSC1	100	89.362	ENSANAG00000034669	EXOSC1	100	89.362	Aotus_nancymaae
ENSEASG00005008684	EXOSC1	98	71.204	ENSACLG00000021243	exosc1	98	71.204	Astatotilapia_calliptera
ENSEASG00005008684	EXOSC1	98	72.775	ENSAMXG00000011116	exosc1	98	72.775	Astyanax_mexicanus
ENSEASG00005008684	EXOSC1	100	88.205	ENSBTAG00000012699	EXOSC1	100	88.205	Bos_taurus
ENSEASG00005008684	EXOSC1	100	88.830	ENSCJAG00000016586	EXOSC1	100	88.830	Callithrix_jacchus
ENSEASG00005008684	EXOSC1	100	88.718	ENSCAFG00000009068	EXOSC1	94	88.718	Canis_familiaris
ENSEASG00005008684	EXOSC1	100	88.718	ENSCAFG00020006002	EXOSC1	94	88.718	Canis_lupus_dingo
ENSEASG00005008684	EXOSC1	100	88.205	ENSCHIG00000015253	EXOSC1	100	88.205	Capra_hircus
ENSEASG00005008684	EXOSC1	100	88.830	ENSTSYG00000000760	EXOSC1	100	88.830	Carlito_syrichta
ENSEASG00005008684	EXOSC1	100	87.692	ENSCPOG00000001173	EXOSC1	100	87.692	Cavia_porcellus
ENSEASG00005008684	EXOSC1	100	56.915	ENSCCAG00000023986	EXOSC1	100	56.915	Cebus_capucinus
ENSEASG00005008684	EXOSC1	100	88.298	ENSCATG00000034114	EXOSC1	100	88.298	Cercocebus_atys
ENSEASG00005008684	EXOSC1	100	88.205	ENSCLAG00000002463	EXOSC1	100	88.205	Chinchilla_lanigera
ENSEASG00005008684	EXOSC1	100	87.179	ENSCSAG00000005870	EXOSC1	100	87.179	Chlorocebus_sabaeus
ENSEASG00005008684	EXOSC1	96	85.027	ENSCHOG00000006477	EXOSC1	100	85.027	Choloepus_hoffmanni
ENSEASG00005008684	EXOSC1	68	65.487	ENSCPBG00000011949	EXOSC1	93	65.487	Chrysemys_picta_bellii
ENSEASG00005008684	EXOSC1	95	51.337	ENSCING00000022734	-	89	51.337	Ciona_intestinalis
ENSEASG00005008684	EXOSC1	95	54.011	ENSCSAVG00000010865	-	95	54.011	Ciona_savignyi
ENSEASG00005008684	EXOSC1	100	88.298	ENSCANG00000034159	EXOSC1	100	88.298	Colobus_angolensis_palliatus
ENSEASG00005008684	EXOSC1	100	87.179	ENSCGRG00001000335	Exosc1	100	87.179	Cricetulus_griseus_chok1gshd
ENSEASG00005008684	EXOSC1	100	87.179	ENSCGRG00000011602	Exosc1	100	87.179	Cricetulus_griseus_crigri
ENSEASG00005008684	EXOSC1	98	70.652	ENSCSEG00000007895	exosc1	95	70.652	Cynoglossus_semilaevis
ENSEASG00005008684	EXOSC1	98	67.539	ENSCVAG00000016748	exosc1	98	67.539	Cyprinodon_variegatus
ENSEASG00005008684	EXOSC1	98	71.728	ENSDARG00000059841	exosc1	98	71.728	Danio_rerio
ENSEASG00005008684	EXOSC1	74	84.459	ENSDNOG00000007983	EXOSC1	100	84.459	Dasypus_novemcinctus
ENSEASG00005008684	EXOSC1	100	87.179	ENSDORG00000016528	Exosc1	100	87.179	Dipodomys_ordii
ENSEASG00005008684	EXOSC1	94	45.789	FBgn0032346	Csl4	92	45.789	Drosophila_melanogaster
ENSEASG00005008684	EXOSC1	100	87.692	ENSETEG00000002469	-	100	87.692	Echinops_telfairi
ENSEASG00005008684	EXOSC1	97	60.622	ENSEBUG00000008164	exosc1	97	60.622	Eptatretus_burgeri
ENSEASG00005008684	EXOSC1	100	100.000	ENSECAG00000010621	EXOSC1	100	100.000	Equus_caballus
ENSEASG00005008684	EXOSC1	100	88.205	ENSEEUG00000005647	EXOSC1	100	88.205	Erinaceus_europaeus
ENSEASG00005008684	EXOSC1	94	71.196	ENSELUG00000017369	exosc1	97	65.946	Esox_lucius
ENSEASG00005008684	EXOSC1	100	89.894	ENSFCAG00000040563	EXOSC1	100	89.894	Felis_catus
ENSEASG00005008684	EXOSC1	100	76.410	ENSFALG00000008450	EXOSC1	100	76.410	Ficedula_albicollis
ENSEASG00005008684	EXOSC1	100	89.231	ENSFDAG00000000846	EXOSC1	100	89.231	Fukomys_damarensis
ENSEASG00005008684	EXOSC1	98	67.539	ENSFHEG00000009154	exosc1	98	67.539	Fundulus_heteroclitus
ENSEASG00005008684	EXOSC1	98	71.204	ENSGMOG00000008993	exosc1	98	71.204	Gadus_morhua
ENSEASG00005008684	EXOSC1	100	76.064	ENSGALG00000039917	EXOSC1	96	80.714	Gallus_gallus
ENSEASG00005008684	EXOSC1	98	69.022	ENSGAFG00000010265	exosc1	94	68.063	Gambusia_affinis
ENSEASG00005008684	EXOSC1	98	71.728	ENSGACG00000018936	exosc1	98	71.728	Gasterosteus_aculeatus
ENSEASG00005008684	EXOSC1	100	77.436	ENSGAGG00000019192	EXOSC1	100	77.436	Gopherus_agassizii
ENSEASG00005008684	EXOSC1	100	87.766	ENSGGOG00000003099	EXOSC1	100	87.766	Gorilla_gorilla
ENSEASG00005008684	EXOSC1	98	71.204	ENSHBUG00000017857	exosc1	98	71.204	Haplochromis_burtoni
ENSEASG00005008684	EXOSC1	100	88.718	ENSHGLG00000016927	EXOSC1	100	88.718	Heterocephalus_glaber_female
ENSEASG00005008684	EXOSC1	100	88.718	ENSHGLG00100012208	EXOSC1	100	88.718	Heterocephalus_glaber_male
ENSEASG00005008684	EXOSC1	98	70.157	ENSHCOG00000019882	exosc1	98	70.157	Hippocampus_comes
ENSEASG00005008684	EXOSC1	98	72.775	ENSIPUG00000007685	exosc1	98	72.775	Ictalurus_punctatus
ENSEASG00005008684	EXOSC1	100	88.718	ENSSTOG00000006615	EXOSC1	100	88.718	Ictidomys_tridecemlineatus
ENSEASG00005008684	EXOSC1	71	71.930	ENSSTOG00000029860	-	92	71.930	Ictidomys_tridecemlineatus
ENSEASG00005008684	EXOSC1	100	88.205	ENSJJAG00000013311	Exosc1	100	88.205	Jaculus_jaculus
ENSEASG00005008684	EXOSC1	98	70.157	ENSKMAG00000001202	exosc1	81	70.157	Kryptolebias_marmoratus
ENSEASG00005008684	EXOSC1	98	70.681	ENSLBEG00000011448	exosc1	98	70.681	Labrus_bergylta
ENSEASG00005008684	EXOSC1	98	57.895	ENSLOCG00000003776	exosc1	98	57.895	Lepisosteus_oculatus
ENSEASG00005008684	EXOSC1	100	89.231	ENSLAFG00000015983	EXOSC1	100	89.231	Loxodonta_africana
ENSEASG00005008684	EXOSC1	100	88.298	ENSMFAG00000001493	EXOSC1	100	88.298	Macaca_fascicularis
ENSEASG00005008684	EXOSC1	100	88.298	ENSMMUG00000020028	EXOSC1	100	88.298	Macaca_mulatta
ENSEASG00005008684	EXOSC1	100	88.298	ENSMNEG00000029816	EXOSC1	100	88.298	Macaca_nemestrina
ENSEASG00005008684	EXOSC1	100	82.051	ENSMLEG00000027643	EXOSC1	100	82.051	Mandrillus_leucophaeus
ENSEASG00005008684	EXOSC1	98	71.728	ENSMAMG00000012200	exosc1	98	71.728	Mastacembelus_armatus
ENSEASG00005008684	EXOSC1	98	71.204	ENSMZEG00005007042	exosc1	98	71.204	Maylandia_zebra
ENSEASG00005008684	EXOSC1	100	88.298	ENSMAUG00000020462	-	100	88.298	Mesocricetus_auratus
ENSEASG00005008684	EXOSC1	100	88.830	ENSMICG00000007664	EXOSC1	100	88.830	Microcebus_murinus
ENSEASG00005008684	EXOSC1	100	87.179	ENSMOCG00000006004	-	100	87.179	Microtus_ochrogaster
ENSEASG00005008684	EXOSC1	97	81.053	ENSMOCG00000017124	-	97	81.053	Microtus_ochrogaster
ENSEASG00005008684	EXOSC1	99	54.545	ENSMMOG00000021403	exosc1	99	54.545	Mola_mola
ENSEASG00005008684	EXOSC1	100	83.673	ENSMODG00000004213	EXOSC1	100	83.673	Monodelphis_domestica
ENSEASG00005008684	EXOSC1	94	71.196	ENSMALG00000007061	exosc1	92	71.196	Monopterus_albus
ENSEASG00005008684	EXOSC1	100	87.692	MGP_CAROLIEiJ_G0022959	Exosc1	100	87.692	Mus_caroli
ENSEASG00005008684	EXOSC1	100	87.179	ENSMUSG00000034321	Exosc1	100	87.179	Mus_musculus
ENSEASG00005008684	EXOSC1	100	87.179	MGP_PahariEiJ_G0014449	Exosc1	100	87.179	Mus_pahari
ENSEASG00005008684	EXOSC1	100	87.692	MGP_SPRETEiJ_G0023880	Exosc1	100	87.692	Mus_spretus
ENSEASG00005008684	EXOSC1	100	88.718	ENSMPUG00000017044	EXOSC1	100	88.718	Mustela_putorius_furo
ENSEASG00005008684	EXOSC1	100	87.692	ENSMLUG00000009228	EXOSC1	100	87.692	Myotis_lucifugus
ENSEASG00005008684	EXOSC1	100	86.667	ENSNGAG00000022033	Exosc1	100	86.667	Nannospalax_galili
ENSEASG00005008684	EXOSC1	98	55.978	ENSNBRG00000024007	exosc1	97	55.978	Neolamprologus_brichardi
ENSEASG00005008684	EXOSC1	100	87.766	ENSNLEG00000013872	EXOSC1	100	87.766	Nomascus_leucogenys
ENSEASG00005008684	EXOSC1	69	75.652	ENSMEUG00000002246	EXOSC1	100	75.652	Notamacropus_eugenii
ENSEASG00005008684	EXOSC1	100	86.154	ENSOPRG00000005065	EXOSC1	100	86.154	Ochotona_princeps
ENSEASG00005008684	EXOSC1	100	88.718	ENSODEG00000016709	EXOSC1	100	88.718	Octodon_degus
ENSEASG00005008684	EXOSC1	98	71.204	ENSONIG00000017683	exosc1	98	71.204	Oreochromis_niloticus
ENSEASG00005008684	EXOSC1	61	93.913	ENSOANG00000006563	EXOSC1	96	94.215	Ornithorhynchus_anatinus
ENSEASG00005008684	EXOSC1	100	83.077	ENSOCUG00000026461	-	100	83.077	Oryctolagus_cuniculus
ENSEASG00005008684	EXOSC1	100	88.265	ENSOCUG00000011898	-	100	88.265	Oryctolagus_cuniculus
ENSEASG00005008684	EXOSC1	98	69.792	ENSORLG00000011595	exosc1	98	69.792	Oryzias_latipes
ENSEASG00005008684	EXOSC1	98	69.792	ENSORLG00020005831	exosc1	98	69.792	Oryzias_latipes_hni
ENSEASG00005008684	EXOSC1	98	69.792	ENSORLG00015004317	exosc1	98	69.792	Oryzias_latipes_hsok
ENSEASG00005008684	EXOSC1	98	57.609	ENSOMEG00000013907	exosc1	98	57.609	Oryzias_melastigma
ENSEASG00005008684	EXOSC1	100	87.179	ENSOGAG00000016259	EXOSC1	100	87.179	Otolemur_garnettii
ENSEASG00005008684	EXOSC1	100	87.692	ENSOARG00000010136	EXOSC1	100	87.692	Ovis_aries
ENSEASG00005008684	EXOSC1	100	81.726	ENSPPAG00000039842	EXOSC1	100	81.726	Pan_paniscus
ENSEASG00005008684	EXOSC1	100	89.894	ENSPPRG00000023366	EXOSC1	100	89.894	Panthera_pardus
ENSEASG00005008684	EXOSC1	100	89.894	ENSPTIG00000017701	EXOSC1	100	89.894	Panthera_tigris_altaica
ENSEASG00005008684	EXOSC1	100	88.298	ENSPTRG00000002808	EXOSC1	100	88.298	Pan_troglodytes
ENSEASG00005008684	EXOSC1	100	88.298	ENSPANG00000021324	EXOSC1	100	88.298	Papio_anubis
ENSEASG00005008684	EXOSC1	98	73.298	ENSPKIG00000016037	exosc1	98	73.298	Paramormyrops_kingsleyae
ENSEASG00005008684	EXOSC1	74	74.286	ENSPSIG00000013571	EXOSC1	99	81.301	Pelodiscus_sinensis
ENSEASG00005008684	EXOSC1	98	70.652	ENSPMGG00000014002	exosc1	98	70.652	Periophthalmus_magnuspinnatus
ENSEASG00005008684	EXOSC1	100	87.179	ENSPEMG00000010710	-	100	87.179	Peromyscus_maniculatus_bairdii
ENSEASG00005008684	EXOSC1	95	64.706	ENSPMAG00000000195	exosc1	95	64.706	Petromyzon_marinus
ENSEASG00005008684	EXOSC1	100	84.615	ENSPCIG00000002210	EXOSC1	99	84.615	Phascolarctos_cinereus
ENSEASG00005008684	EXOSC1	98	67.539	ENSPFOG00000006755	exosc1	94	67.539	Poecilia_formosa
ENSEASG00005008684	EXOSC1	98	67.539	ENSPLAG00000005880	exosc1	98	67.539	Poecilia_latipinna
ENSEASG00005008684	EXOSC1	98	68.478	ENSPMEG00000015598	exosc1	94	67.539	Poecilia_mexicana
ENSEASG00005008684	EXOSC1	98	68.478	ENSPREG00000000405	exosc1	93	68.478	Poecilia_reticulata
ENSEASG00005008684	EXOSC1	100	87.179	ENSPPYG00000002531	EXOSC1	100	87.179	Pongo_abelii
ENSEASG00005008684	EXOSC1	100	87.692	ENSPCAG00000009135	EXOSC1	100	87.692	Procavia_capensis
ENSEASG00005008684	EXOSC1	100	82.447	ENSPCOG00000027539	EXOSC1	100	82.447	Propithecus_coquereli
ENSEASG00005008684	EXOSC1	100	88.205	ENSPVAG00000003372	EXOSC1	100	88.205	Pteropus_vampyrus
ENSEASG00005008684	EXOSC1	98	71.739	ENSPNYG00000021745	exosc1	98	71.739	Pundamilia_nyererei
ENSEASG00005008684	EXOSC1	98	73.298	ENSPNAG00000001944	exosc1	98	73.298	Pygocentrus_nattereri
ENSEASG00005008684	EXOSC1	100	87.179	ENSRNOG00000048708	Exosc1	100	87.179	Rattus_norvegicus
ENSEASG00005008684	EXOSC1	100	88.298	ENSRBIG00000035618	EXOSC1	100	88.298	Rhinopithecus_bieti
ENSEASG00005008684	EXOSC1	100	88.298	ENSRROG00000032589	EXOSC1	100	88.298	Rhinopithecus_roxellana
ENSEASG00005008684	EXOSC1	100	89.362	ENSSBOG00000000359	EXOSC1	100	89.362	Saimiri_boliviensis_boliviensis
ENSEASG00005008684	EXOSC1	71	90.441	ENSSHAG00000018219	EXOSC1	93	90.441	Sarcophilus_harrisii
ENSEASG00005008684	EXOSC1	98	74.346	ENSSFOG00015009069	exosc1	98	74.346	Scleropages_formosus
ENSEASG00005008684	EXOSC1	98	70.270	ENSSFOG00015016289	-	98	70.526	Scleropages_formosus
ENSEASG00005008684	EXOSC1	98	71.728	ENSSMAG00000003721	exosc1	98	71.728	Scophthalmus_maximus
ENSEASG00005008684	EXOSC1	98	71.728	ENSSDUG00000002993	exosc1	98	71.728	Seriola_dumerili
ENSEASG00005008684	EXOSC1	98	71.728	ENSSLDG00000025181	exosc1	98	71.728	Seriola_lalandi_dorsalis
ENSEASG00005008684	EXOSC1	100	84.103	ENSSARG00000000162	EXOSC1	100	84.103	Sorex_araneus
ENSEASG00005008684	EXOSC1	99	76.804	ENSSPUG00000012263	EXOSC1	99	76.804	Sphenodon_punctatus
ENSEASG00005008684	EXOSC1	98	62.827	ENSSPAG00000016792	exosc1	82	62.827	Stegastes_partitus
ENSEASG00005008684	EXOSC1	100	88.205	ENSSSCG00000010518	EXOSC1	91	88.205	Sus_scrofa
ENSEASG00005008684	EXOSC1	98	75.000	ENSTGUG00000009692	EXOSC1	99	75.000	Taeniopygia_guttata
ENSEASG00005008684	EXOSC1	97	65.608	ENSTRUG00000007706	exosc1	98	65.608	Takifugu_rubripes
ENSEASG00005008684	EXOSC1	97	65.625	ENSTNIG00000014079	exosc1	97	65.625	Tetraodon_nigroviridis
ENSEASG00005008684	EXOSC1	100	85.567	ENSTBEG00000006011	EXOSC1	100	85.567	Tupaia_belangeri
ENSEASG00005008684	EXOSC1	94	88.043	ENSTTRG00000009887	EXOSC1	100	88.043	Tursiops_truncatus
ENSEASG00005008684	EXOSC1	100	72.872	ENSUAMG00000010266	EXOSC1	100	72.872	Ursus_americanus
ENSEASG00005008684	EXOSC1	100	72.821	ENSUMAG00000022002	EXOSC1	100	72.821	Ursus_maritimus
ENSEASG00005008684	EXOSC1	100	88.718	ENSVVUG00000023192	EXOSC1	63	88.718	Vulpes_vulpes
ENSEASG00005008684	EXOSC1	98	72.917	ENSXETG00000003434	exosc1	99	72.917	Xenopus_tropicalis
ENSEASG00005008684	EXOSC1	64	84.298	ENSXCOG00000014499	exosc1	93	84.298	Xiphophorus_couchianus
ENSEASG00005008684	EXOSC1	98	69.022	ENSXMAG00000023382	exosc1	93	69.022	Xiphophorus_maculatus