EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005008789 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 14548 bases
Position: chrPSZQ01006590.1:4676098-4690645
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005012591	zf-C3HC	PF07967.13	4e-37	1	1
ENSEASP00005012591	Rsm1	PF08600.10	6.8e-17	1	2
ENSEASP00005012591	Rsm1	PF08600.10	6.8e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005013678	ZC3HC1-201	1404	-	ENSEASP00005012591	467 (aa)	-	-

Gene Model

Click here to download ENSEASG00005008789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005008789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005008789	ZC3HC1	98	91.685	ENSG00000091732	ZC3HC1	95	91.685	Homo_sapiens
ENSEASG00005008789	ZC3HC1	92	47.216	ENSAPOG00000009078	zc3hc1	87	45.536	Acanthochromis_polyacanthus
ENSEASG00005008789	ZC3HC1	97	91.189	ENSAMEG00000005425	ZC3HC1	90	91.189	Ailuropoda_melanoleuca
ENSEASG00005008789	ZC3HC1	92	45.676	ENSACIG00000019513	zc3hc1	87	44.592	Amphilophus_citrinellus
ENSEASG00005008789	ZC3HC1	92	47.661	ENSAOCG00000024310	zc3hc1	87	46.341	Amphiprion_ocellaris
ENSEASG00005008789	ZC3HC1	92	47.661	ENSAPEG00000004907	zc3hc1	87	45.982	Amphiprion_percula
ENSEASG00005008789	ZC3HC1	87	47.281	ENSATEG00000016898	zc3hc1	85	46.244	Anabas_testudineus
ENSEASG00005008789	ZC3HC1	95	60.899	ENSAPLG00000003832	ZC3HC1	99	60.899	Anas_platyrhynchos
ENSEASG00005008789	ZC3HC1	97	62.203	ENSACAG00000001638	ZC3HC1	90	62.203	Anolis_carolinensis
ENSEASG00005008789	ZC3HC1	97	90.949	ENSANAG00000022213	ZC3HC1	99	90.732	Aotus_nancymaae
ENSEASG00005008789	ZC3HC1	95	45.064	ENSACLG00000025033	zc3hc1	98	44.017	Astatotilapia_calliptera
ENSEASG00005008789	ZC3HC1	91	45.497	ENSAMXG00000036792	zc3hc1	87	45.266	Astyanax_mexicanus
ENSEASG00005008789	ZC3HC1	97	91.372	ENSBTAG00000011247	ZC3HC1	90	91.372	Bos_taurus
ENSEASG00005008789	ZC3HC1	97	91.593	ENSCJAG00000010536	ZC3HC1	99	89.756	Callithrix_jacchus
ENSEASG00005008789	ZC3HC1	97	92.478	ENSCAFG00000031850	-	90	92.478	Canis_familiaris
ENSEASG00005008789	ZC3HC1	97	92.257	ENSCAFG00000029401	-	89	92.257	Canis_familiaris
ENSEASG00005008789	ZC3HC1	97	92.308	ENSCAFG00000001499	-	89	92.308	Canis_familiaris
ENSEASG00005008789	ZC3HC1	97	92.257	ENSCAFG00000028735	-	90	92.257	Canis_familiaris
ENSEASG00005008789	ZC3HC1	97	92.257	ENSCAFG00020006829	-	90	92.257	Canis_lupus_dingo
ENSEASG00005008789	ZC3HC1	97	91.189	ENSCAFG00020023333	-	90	91.189	Canis_lupus_dingo
ENSEASG00005008789	ZC3HC1	97	84.071	ENSCHIG00000014103	ZC3HC1	90	84.071	Capra_hircus
ENSEASG00005008789	ZC3HC1	97	87.832	ENSTSYG00000002843	ZC3HC1	90	87.832	Carlito_syrichta
ENSEASG00005008789	ZC3HC1	97	63.077	ENSCAPG00000016300	ZC3HC1	94	75.820	Cavia_aperea
ENSEASG00005008789	ZC3HC1	97	84.071	ENSCPOG00000014034	ZC3HC1	90	82.965	Cavia_porcellus
ENSEASG00005008789	ZC3HC1	98	72.052	ENSCCAG00000020384	ZC3HC1	100	90.749	Cebus_capucinus
ENSEASG00005008789	ZC3HC1	97	92.478	ENSCATG00000023130	ZC3HC1	100	89.126	Cercocebus_atys
ENSEASG00005008789	ZC3HC1	88	65.534	ENSCLAG00000008260	ZC3HC1	88	62.954	Chinchilla_lanigera
ENSEASG00005008789	ZC3HC1	78	92.077	ENSCSAG00000009881	ZC3HC1	97	92.077	Chlorocebus_sabaeus
ENSEASG00005008789	ZC3HC1	96	90.889	ENSCHOG00000011846	ZC3HC1	99	90.889	Choloepus_hoffmanni
ENSEASG00005008789	ZC3HC1	97	68.722	ENSCPBG00000017519	ZC3HC1	91	68.722	Chrysemys_picta_bellii
ENSEASG00005008789	ZC3HC1	97	92.257	ENSCANG00000029091	ZC3HC1	99	88.293	Colobus_angolensis_palliatus
ENSEASG00005008789	ZC3HC1	97	88.717	ENSCGRG00001018805	Zc3hc1	90	88.717	Cricetulus_griseus_chok1gshd
ENSEASG00005008789	ZC3HC1	97	87.389	ENSCGRG00000017114	Zc3hc1	90	87.389	Cricetulus_griseus_crigri
ENSEASG00005008789	ZC3HC1	93	45.575	ENSCSEG00000009284	zc3hc1	86	44.714	Cynoglossus_semilaevis
ENSEASG00005008789	ZC3HC1	92	45.372	ENSCVAG00000011566	zc3hc1	86	44.494	Cyprinodon_variegatus
ENSEASG00005008789	ZC3HC1	98	47.303	ENSDARG00000062651	zc3hc1	95	46.266	Danio_rerio
ENSEASG00005008789	ZC3HC1	97	90.708	ENSDNOG00000045016	ZC3HC1	90	90.708	Dasypus_novemcinctus
ENSEASG00005008789	ZC3HC1	89	86.058	ENSDORG00000008697	Zc3hc1	90	86.058	Dipodomys_ordii
ENSEASG00005008789	ZC3HC1	97	99.119	ENSECAG00000017886	ZC3HC1	90	99.119	Equus_caballus
ENSEASG00005008789	ZC3HC1	72	86.420	ENSEEUG00000003123	ZC3HC1	67	86.420	Erinaceus_europaeus
ENSEASG00005008789	ZC3HC1	94	45.217	ENSELUG00000023168	zc3hc1	89	46.055	Esox_lucius
ENSEASG00005008789	ZC3HC1	97	91.150	ENSFCAG00000010429	ZC3HC1	96	89.823	Felis_catus
ENSEASG00005008789	ZC3HC1	97	59.957	ENSFALG00000005006	ZC3HC1	99	59.957	Ficedula_albicollis
ENSEASG00005008789	ZC3HC1	97	87.389	ENSFDAG00000019897	ZC3HC1	90	87.389	Fukomys_damarensis
ENSEASG00005008789	ZC3HC1	93	44.866	ENSFHEG00000020149	zc3hc1	87	44.196	Fundulus_heteroclitus
ENSEASG00005008789	ZC3HC1	91	44.773	ENSGMOG00000002914	zc3hc1	87	45.205	Gadus_morhua
ENSEASG00005008789	ZC3HC1	95	63.677	ENSGALG00000008003	ZC3HC1	89	63.677	Gallus_gallus
ENSEASG00005008789	ZC3HC1	95	45.870	ENSGAFG00000016095	zc3hc1	89	44.252	Gambusia_affinis
ENSEASG00005008789	ZC3HC1	92	46.756	ENSGACG00000019706	zc3hc1	88	46.358	Gasterosteus_aculeatus
ENSEASG00005008789	ZC3HC1	83	69.821	ENSGAGG00000016106	ZC3HC1	100	69.821	Gopherus_agassizii
ENSEASG00005008789	ZC3HC1	98	91.466	ENSGGOG00000015504	ZC3HC1	98	89.216	Gorilla_gorilla
ENSEASG00005008789	ZC3HC1	92	46.325	ENSHBUG00000008347	zc3hc1	87	45.233	Haplochromis_burtoni
ENSEASG00005008789	ZC3HC1	97	88.717	ENSHGLG00000005085	ZC3HC1	90	88.717	Heterocephalus_glaber_female
ENSEASG00005008789	ZC3HC1	97	88.496	ENSHGLG00100011395	ZC3HC1	90	88.496	Heterocephalus_glaber_male
ENSEASG00005008789	ZC3HC1	92	43.807	ENSHCOG00000014309	zc3hc1	86	43.936	Hippocampus_comes
ENSEASG00005008789	ZC3HC1	97	90.265	ENSSTOG00000023599	-	90	90.265	Ictidomys_tridecemlineatus
ENSEASG00005008789	ZC3HC1	92	46.444	ENSKMAG00000015315	zc3hc1	81	45.333	Kryptolebias_marmoratus
ENSEASG00005008789	ZC3HC1	91	46.102	ENSLBEG00000017325	zc3hc1	92	45.354	Labrus_bergylta
ENSEASG00005008789	ZC3HC1	75	58.082	ENSLACG00000013032	ZC3HC1	86	58.082	Latimeria_chalumnae
ENSEASG00005008789	ZC3HC1	92	53.759	ENSLOCG00000015963	zc3hc1	87	54.545	Lepisosteus_oculatus
ENSEASG00005008789	ZC3HC1	97	88.816	ENSLAFG00000001292	ZC3HC1	90	88.816	Loxodonta_africana
ENSEASG00005008789	ZC3HC1	97	92.699	ENSMFAG00000030176	ZC3HC1	100	89.339	Macaca_fascicularis
ENSEASG00005008789	ZC3HC1	100	89.552	ENSMMUG00000006155	ZC3HC1	99	92.582	Macaca_mulatta
ENSEASG00005008789	ZC3HC1	97	92.920	ENSMNEG00000011833	ZC3HC1	100	90.566	Macaca_nemestrina
ENSEASG00005008789	ZC3HC1	97	92.699	ENSMLEG00000027328	ZC3HC1	98	92.350	Mandrillus_leucophaeus
ENSEASG00005008789	ZC3HC1	92	47.216	ENSMAMG00000010691	zc3hc1	87	46.120	Mastacembelus_armatus
ENSEASG00005008789	ZC3HC1	92	46.102	ENSMZEG00005007142	zc3hc1	87	45.011	Maylandia_zebra
ENSEASG00005008789	ZC3HC1	95	62.914	ENSMGAG00000002977	ZC3HC1	89	63.576	Meleagris_gallopavo
ENSEASG00005008789	ZC3HC1	90	80.851	ENSMAUG00000017032	Zc3hc1	93	80.851	Mesocricetus_auratus
ENSEASG00005008789	ZC3HC1	97	90.929	ENSMICG00000009167	ZC3HC1	90	90.929	Microcebus_murinus
ENSEASG00005008789	ZC3HC1	97	87.389	ENSMOCG00000015239	Zc3hc1	90	87.389	Microtus_ochrogaster
ENSEASG00005008789	ZC3HC1	93	43.267	ENSMMOG00000002204	zc3hc1	99	42.198	Mola_mola
ENSEASG00005008789	ZC3HC1	97	64.043	ENSMODG00000014630	ZC3HC1	89	64.043	Monodelphis_domestica
ENSEASG00005008789	ZC3HC1	92	46.622	ENSMALG00000014447	zc3hc1	87	46.325	Monopterus_albus
ENSEASG00005008789	ZC3HC1	97	87.389	MGP_CAROLIEiJ_G0028183	Zc3hc1	90	87.389	Mus_caroli
ENSEASG00005008789	ZC3HC1	97	87.389	ENSMUSG00000039130	Zc3hc1	90	87.389	Mus_musculus
ENSEASG00005008789	ZC3HC1	97	79.204	MGP_PahariEiJ_G0021941	Zc3hc1	89	79.204	Mus_pahari
ENSEASG00005008789	ZC3HC1	97	87.389	MGP_SPRETEiJ_G0029183	Zc3hc1	90	87.389	Mus_spretus
ENSEASG00005008789	ZC3HC1	92	91.142	ENSMPUG00000005297	ZC3HC1	85	91.142	Mustela_putorius_furo
ENSEASG00005008789	ZC3HC1	97	90.549	ENSMLUG00000000063	-	90	90.549	Myotis_lucifugus
ENSEASG00005008789	ZC3HC1	72	85.423	ENSMLUG00000029228	-	99	85.423	Myotis_lucifugus
ENSEASG00005008789	ZC3HC1	96	88.692	ENSNGAG00000019014	Zc3hc1	90	88.692	Nannospalax_galili
ENSEASG00005008789	ZC3HC1	92	46.205	ENSNBRG00000004577	zc3hc1	87	45.111	Neolamprologus_brichardi
ENSEASG00005008789	ZC3HC1	97	92.018	ENSNLEG00000012698	ZC3HC1	97	92.011	Nomascus_leucogenys
ENSEASG00005008789	ZC3HC1	97	79.867	ENSMEUG00000011023	ZC3HC1	90	79.867	Notamacropus_eugenii
ENSEASG00005008789	ZC3HC1	59	81.731	ENSOPRG00000007867	-	56	81.731	Ochotona_princeps
ENSEASG00005008789	ZC3HC1	97	83.407	ENSODEG00000014604	ZC3HC1	89	84.314	Octodon_degus
ENSEASG00005008789	ZC3HC1	93	46.341	ENSONIG00000011644	zc3hc1	87	45.254	Oreochromis_niloticus
ENSEASG00005008789	ZC3HC1	97	68.683	ENSOANG00000011460	ZC3HC1	99	68.683	Ornithorhynchus_anatinus
ENSEASG00005008789	ZC3HC1	97	85.934	ENSOCUG00000017137	ZC3HC1	90	85.934	Oryctolagus_cuniculus
ENSEASG00005008789	ZC3HC1	92	45.372	ENSORLG00000014409	zc3hc1	86	45.393	Oryzias_latipes
ENSEASG00005008789	ZC3HC1	92	45.598	ENSORLG00020015874	zc3hc1	86	45.618	Oryzias_latipes_hni
ENSEASG00005008789	ZC3HC1	92	45.372	ENSORLG00015014641	zc3hc1	86	45.393	Oryzias_latipes_hsok
ENSEASG00005008789	ZC3HC1	92	47.248	ENSOMEG00000020604	zc3hc1	87	47.178	Oryzias_melastigma
ENSEASG00005008789	ZC3HC1	92	47.248	ENSOMEG00000000215	zc3hc1	87	47.178	Oryzias_melastigma
ENSEASG00005008789	ZC3HC1	97	85.398	ENSOGAG00000026193	ZC3HC1	90	85.398	Otolemur_garnettii
ENSEASG00005008789	ZC3HC1	97	91.209	ENSOARG00000004907	ZC3HC1	89	91.209	Ovis_aries
ENSEASG00005008789	ZC3HC1	98	91.685	ENSPPAG00000043172	ZC3HC1	98	89.216	Pan_paniscus
ENSEASG00005008789	ZC3HC1	97	90.265	ENSPPRG00000001004	ZC3HC1	96	88.938	Panthera_pardus
ENSEASG00005008789	ZC3HC1	97	90.929	ENSPTIG00000007823	ZC3HC1	96	89.602	Panthera_tigris_altaica
ENSEASG00005008789	ZC3HC1	98	91.466	ENSPTRG00000019685	ZC3HC1	98	89.216	Pan_troglodytes
ENSEASG00005008789	ZC3HC1	100	89.126	ENSPANG00000014229	ZC3HC1	100	89.126	Papio_anubis
ENSEASG00005008789	ZC3HC1	92	49.886	ENSPKIG00000007172	zc3hc1	87	49.886	Paramormyrops_kingsleyae
ENSEASG00005008789	ZC3HC1	97	63.341	ENSPSIG00000016646	ZC3HC1	91	63.341	Pelodiscus_sinensis
ENSEASG00005008789	ZC3HC1	94	41.866	ENSPMGG00000003548	zc3hc1	90	40.930	Periophthalmus_magnuspinnatus
ENSEASG00005008789	ZC3HC1	97	87.832	ENSPEMG00000000514	Zc3hc1	90	87.832	Peromyscus_maniculatus_bairdii
ENSEASG00005008789	ZC3HC1	97	76.770	ENSPCIG00000020619	ZC3HC1	100	79.434	Phascolarctos_cinereus
ENSEASG00005008789	ZC3HC1	95	45.161	ENSPFOG00000003466	zc3hc1	89	44.540	Poecilia_formosa
ENSEASG00005008789	ZC3HC1	95	44.468	ENSPLAG00000022211	zc3hc1	89	43.856	Poecilia_latipinna
ENSEASG00005008789	ZC3HC1	95	45.161	ENSPMEG00000001458	zc3hc1	90	44.342	Poecilia_mexicana
ENSEASG00005008789	ZC3HC1	95	44.754	ENSPREG00000004004	zc3hc1	89	43.923	Poecilia_reticulata
ENSEASG00005008789	ZC3HC1	97	83.444	ENSPPYG00000017998	ZC3HC1	90	83.444	Pongo_abelii
ENSEASG00005008789	ZC3HC1	97	85.619	ENSPCAG00000001182	ZC3HC1	98	85.619	Procavia_capensis
ENSEASG00005008789	ZC3HC1	97	92.035	ENSPCOG00000017354	ZC3HC1	90	92.035	Propithecus_coquereli
ENSEASG00005008789	ZC3HC1	97	86.062	ENSPVAG00000003195	ZC3HC1	90	85.841	Pteropus_vampyrus
ENSEASG00005008789	ZC3HC1	92	46.102	ENSPNYG00000020692	zc3hc1	87	45.011	Pundamilia_nyererei
ENSEASG00005008789	ZC3HC1	91	45.517	ENSPNAG00000020746	zc3hc1	87	45.287	Pygocentrus_nattereri
ENSEASG00005008789	ZC3HC1	97	86.313	ENSRNOG00000010154	Zc3hc1	90	86.313	Rattus_norvegicus
ENSEASG00005008789	ZC3HC1	97	92.699	ENSRBIG00000029409	ZC3HC1	99	92.699	Rhinopithecus_bieti
ENSEASG00005008789	ZC3HC1	97	92.699	ENSRROG00000041831	ZC3HC1	100	89.407	Rhinopithecus_roxellana
ENSEASG00005008789	ZC3HC1	84	89.836	ENSSBOG00000032787	ZC3HC1	99	90.244	Saimiri_boliviensis_boliviensis
ENSEASG00005008789	ZC3HC1	97	80.396	ENSSHAG00000002529	ZC3HC1	98	80.396	Sarcophilus_harrisii
ENSEASG00005008789	ZC3HC1	96	50.877	ENSSFOG00015003667	zc3hc1	85	50.325	Scleropages_formosus
ENSEASG00005008789	ZC3HC1	93	46.903	ENSSMAG00000000647	zc3hc1	79	46.460	Scophthalmus_maximus
ENSEASG00005008789	ZC3HC1	92	48.214	ENSSDUG00000004241	zc3hc1	85	46.889	Seriola_dumerili
ENSEASG00005008789	ZC3HC1	92	47.875	ENSSLDG00000025056	zc3hc1	85	46.771	Seriola_lalandi_dorsalis
ENSEASG00005008789	ZC3HC1	97	78.540	ENSSARG00000012013	ZC3HC1	90	78.540	Sorex_araneus
ENSEASG00005008789	ZC3HC1	94	57.562	ENSSPUG00000000778	ZC3HC1	87	57.562	Sphenodon_punctatus
ENSEASG00005008789	ZC3HC1	92	47.884	ENSSPAG00000020041	zc3hc1	87	46.785	Stegastes_partitus
ENSEASG00005008789	ZC3HC1	97	90.487	ENSSSCG00000016565	ZC3HC1	100	90.231	Sus_scrofa
ENSEASG00005008789	ZC3HC1	52	57.724	ENSTGUG00000016262	ZC3HC1	100	57.724	Taeniopygia_guttata
ENSEASG00005008789	ZC3HC1	93	44.843	ENSTRUG00000020077	zc3hc1	88	43.946	Takifugu_rubripes
ENSEASG00005008789	ZC3HC1	93	44.944	ENSTNIG00000007585	zc3hc1	92	44.743	Tetraodon_nigroviridis
ENSEASG00005008789	ZC3HC1	97	79.379	ENSTBEG00000005216	ZC3HC1	90	79.379	Tupaia_belangeri
ENSEASG00005008789	ZC3HC1	97	91.611	ENSTTRG00000008458	ZC3HC1	94	91.611	Tursiops_truncatus
ENSEASG00005008789	ZC3HC1	97	92.035	ENSUAMG00000020249	ZC3HC1	90	92.035	Ursus_americanus
ENSEASG00005008789	ZC3HC1	97	91.593	ENSUMAG00000009268	ZC3HC1	90	91.593	Ursus_maritimus
ENSEASG00005008789	ZC3HC1	73	91.837	ENSVPAG00000010846	ZC3HC1	67	91.837	Vicugna_pacos
ENSEASG00005008789	ZC3HC1	92	92.093	ENSVVUG00000012386	ZC3HC1	89	92.093	Vulpes_vulpes
ENSEASG00005008789	ZC3HC1	88	54.217	ENSXETG00000033900	zc3hc1	85	54.217	Xenopus_tropicalis
ENSEASG00005008789	ZC3HC1	96	45.140	ENSXCOG00000013570	zc3hc1	98	40.998	Xiphophorus_couchianus
ENSEASG00005008789	ZC3HC1	95	45.969	ENSXMAG00000010979	zc3hc1	95	45.119	Xiphophorus_maculatus