EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005008932 (Gene tree)
Gene ID: -
Gene Symbol: LSM8
Alias: YJR022W
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 7512 bases
Position: chrPSZQ01003374.1:42227945-42235456
Accession: 20471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005012779	LSM	PF01423.22	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005013888	LSM8-201	465	-	ENSEASP00005012779	154 (aa)	-	-

Gene Model

Click here to download ENSEASG00005008932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005008932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005008932	LSM8	58	33.333	ENSEASG00005016677	LSM1	67	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005008932	LSM8	62	100.000	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSEASG00005008932	LSM8	62	92.708	ENSAPOG00000008649	lsm8	100	92.708	Acanthochromis_polyacanthus
ENSEASG00005008932	LSM8	62	100.000	ENSAMEG00000001162	LSM8	100	100.000	Ailuropoda_melanoleuca
ENSEASG00005008932	LSM8	62	92.708	ENSAOCG00000013926	lsm8	100	92.708	Amphiprion_ocellaris
ENSEASG00005008932	LSM8	62	92.708	ENSAPEG00000023502	lsm8	100	92.708	Amphiprion_percula
ENSEASG00005008932	LSM8	59	91.489	ENSAPLG00000005115	LSM8	95	91.489	Anas_platyrhynchos
ENSEASG00005008932	LSM8	62	100.000	ENSANAG00000027771	LSM8	100	100.000	Aotus_nancymaae
ENSEASG00005008932	LSM8	62	92.708	ENSACLG00000011253	lsm8	100	92.708	Astatotilapia_calliptera
ENSEASG00005008932	LSM8	62	94.792	ENSAMXG00000042902	lsm8	100	94.792	Astyanax_mexicanus
ENSEASG00005008932	LSM8	62	100.000	ENSBTAG00000012649	LSM8	100	100.000	Bos_taurus
ENSEASG00005008932	LSM8	59	60.440	WBGene00003082	lsm-8	93	60.440	Caenorhabditis_elegans
ENSEASG00005008932	LSM8	62	100.000	ENSCJAG00000046406	LSM8	100	100.000	Callithrix_jacchus
ENSEASG00005008932	LSM8	64	100.000	ENSCAFG00000016459	LSM8	100	100.000	Canis_familiaris
ENSEASG00005008932	LSM8	62	88.542	ENSCAFG00020012800	-	75	88.542	Canis_lupus_dingo
ENSEASG00005008932	LSM8	62	100.000	ENSCAFG00020007643	-	100	100.000	Canis_lupus_dingo
ENSEASG00005008932	LSM8	55	100.000	ENSCHIG00000014201	LSM8	90	100.000	Capra_hircus
ENSEASG00005008932	LSM8	62	100.000	ENSTSYG00000032434	LSM8	100	100.000	Carlito_syrichta
ENSEASG00005008932	LSM8	62	100.000	ENSCPOG00000035673	LSM8	100	100.000	Cavia_porcellus
ENSEASG00005008932	LSM8	62	100.000	ENSCCAG00000021329	LSM8	100	100.000	Cebus_capucinus
ENSEASG00005008932	LSM8	62	100.000	ENSCATG00000045302	LSM8	100	100.000	Cercocebus_atys
ENSEASG00005008932	LSM8	62	100.000	ENSCLAG00000003726	LSM8	100	100.000	Chinchilla_lanigera
ENSEASG00005008932	LSM8	62	95.833	ENSCSAG00000019007	-	100	95.833	Chlorocebus_sabaeus
ENSEASG00005008932	LSM8	62	100.000	ENSCSAG00000010802	-	100	100.000	Chlorocebus_sabaeus
ENSEASG00005008932	LSM8	55	100.000	ENSCPBG00000008154	LSM8	87	100.000	Chrysemys_picta_bellii
ENSEASG00005008932	LSM8	62	75.000	ENSCING00000024877	-	100	75.000	Ciona_intestinalis
ENSEASG00005008932	LSM8	62	100.000	ENSCANG00000040728	LSM8	100	100.000	Colobus_angolensis_palliatus
ENSEASG00005008932	LSM8	62	100.000	ENSCGRG00001000450	Lsm8	100	100.000	Cricetulus_griseus_chok1gshd
ENSEASG00005008932	LSM8	55	100.000	ENSCGRG00000005587	Lsm8	100	100.000	Cricetulus_griseus_crigri
ENSEASG00005008932	LSM8	62	81.250	ENSCSEG00000004164	lsm8	100	81.250	Cynoglossus_semilaevis
ENSEASG00005008932	LSM8	62	91.667	ENSCVAG00000020547	lsm8	100	91.667	Cyprinodon_variegatus
ENSEASG00005008932	LSM8	62	91.667	ENSDARG00000091656	lsm8	100	91.667	Danio_rerio
ENSEASG00005008932	LSM8	62	100.000	ENSDNOG00000034613	LSM8	100	100.000	Dasypus_novemcinctus
ENSEASG00005008932	LSM8	62	100.000	ENSDORG00000027868	Lsm8	100	100.000	Dipodomys_ordii
ENSEASG00005008932	LSM8	61	69.149	FBgn0035271	CG2021	99	69.149	Drosophila_melanogaster
ENSEASG00005008932	LSM8	62	98.958	ENSETEG00000011594	LSM8	100	98.958	Echinops_telfairi
ENSEASG00005008932	LSM8	64	88.889	ENSECAG00000024025	LSM8	88	88.889	Equus_caballus
ENSEASG00005008932	LSM8	62	91.667	ENSELUG00000010138	lsm8	100	91.667	Esox_lucius
ENSEASG00005008932	LSM8	53	74.390	ENSFCAG00000044794	-	83	74.390	Felis_catus
ENSEASG00005008932	LSM8	62	100.000	ENSFCAG00000036620	-	100	100.000	Felis_catus
ENSEASG00005008932	LSM8	62	98.958	ENSFALG00000010023	LSM8	100	98.958	Ficedula_albicollis
ENSEASG00005008932	LSM8	62	100.000	ENSFDAG00000019530	LSM8	100	100.000	Fukomys_damarensis
ENSEASG00005008932	LSM8	62	92.708	ENSFHEG00000013729	lsm8	100	92.708	Fundulus_heteroclitus
ENSEASG00005008932	LSM8	62	98.958	ENSGALG00000009110	LSM8	100	98.958	Gallus_gallus
ENSEASG00005008932	LSM8	62	91.667	ENSGAFG00000001135	lsm8	100	91.667	Gambusia_affinis
ENSEASG00005008932	LSM8	62	100.000	ENSGAGG00000017366	LSM8	100	100.000	Gopherus_agassizii
ENSEASG00005008932	LSM8	62	100.000	ENSGGOG00000041883	LSM8	100	100.000	Gorilla_gorilla
ENSEASG00005008932	LSM8	62	92.708	ENSHBUG00000003646	lsm8	100	92.708	Haplochromis_burtoni
ENSEASG00005008932	LSM8	62	93.750	ENSHGLG00000019782	-	100	93.750	Heterocephalus_glaber_female
ENSEASG00005008932	LSM8	62	95.833	ENSHGLG00100012166	-	100	95.833	Heterocephalus_glaber_male
ENSEASG00005008932	LSM8	61	97.872	ENSHGLG00100003934	-	94	97.872	Heterocephalus_glaber_male
ENSEASG00005008932	LSM8	62	91.667	ENSHCOG00000005037	lsm8	100	91.667	Hippocampus_comes
ENSEASG00005008932	LSM8	62	94.792	ENSIPUG00000019811	NAA38	100	94.792	Ictalurus_punctatus
ENSEASG00005008932	LSM8	57	87.500	ENSSTOG00000034801	-	81	87.500	Ictidomys_tridecemlineatus
ENSEASG00005008932	LSM8	62	100.000	ENSSTOG00000009039	LSM8	100	100.000	Ictidomys_tridecemlineatus
ENSEASG00005008932	LSM8	62	100.000	ENSJJAG00000009031	Lsm8	99	100.000	Jaculus_jaculus
ENSEASG00005008932	LSM8	62	92.708	ENSKMAG00000018983	lsm8	100	92.708	Kryptolebias_marmoratus
ENSEASG00005008932	LSM8	62	94.792	ENSLACG00000010231	LSM8	100	94.792	Latimeria_chalumnae
ENSEASG00005008932	LSM8	62	93.750	ENSLOCG00000015580	lsm8	100	93.750	Lepisosteus_oculatus
ENSEASG00005008932	LSM8	62	98.969	ENSLAFG00000011242	LSM8	100	98.969	Loxodonta_africana
ENSEASG00005008932	LSM8	62	95.833	ENSMFAG00000013044	-	100	95.833	Macaca_fascicularis
ENSEASG00005008932	LSM8	62	100.000	ENSMFAG00000035798	LSM8	100	100.000	Macaca_fascicularis
ENSEASG00005008932	LSM8	92	79.577	ENSMMUG00000046401	LSM8	100	97.297	Macaca_mulatta
ENSEASG00005008932	LSM8	62	100.000	ENSMNEG00000036764	-	100	100.000	Macaca_nemestrina
ENSEASG00005008932	LSM8	62	100.000	ENSMLEG00000035828	-	100	100.000	Mandrillus_leucophaeus
ENSEASG00005008932	LSM8	62	84.375	ENSMLEG00000039324	-	100	84.375	Mandrillus_leucophaeus
ENSEASG00005008932	LSM8	62	92.708	ENSMZEG00005019138	lsm8	100	92.708	Maylandia_zebra
ENSEASG00005008932	LSM8	62	98.958	ENSMGAG00000008808	LSM8	100	98.958	Meleagris_gallopavo
ENSEASG00005008932	LSM8	62	80.208	ENSMAUG00000015356	-	100	80.208	Mesocricetus_auratus
ENSEASG00005008932	LSM8	62	92.708	ENSMAUG00000015721	-	100	92.708	Mesocricetus_auratus
ENSEASG00005008932	LSM8	62	100.000	ENSMICG00000042730	LSM8	100	100.000	Microcebus_murinus
ENSEASG00005008932	LSM8	62	100.000	ENSMOCG00000001688	Lsm8	100	100.000	Microtus_ochrogaster
ENSEASG00005008932	LSM8	62	93.750	ENSMALG00000000405	lsm8	100	93.750	Monopterus_albus
ENSEASG00005008932	LSM8	62	100.000	MGP_CAROLIEiJ_G0028125	-	100	100.000	Mus_caroli
ENSEASG00005008932	LSM8	62	100.000	ENSMUSG00000044155	Lsm8	100	100.000	Mus_musculus
ENSEASG00005008932	LSM8	62	100.000	MGP_PahariEiJ_G0021881	Lsm8	100	100.000	Mus_pahari
ENSEASG00005008932	LSM8	62	100.000	MGP_SPRETEiJ_G0029125	-	100	100.000	Mus_spretus
ENSEASG00005008932	LSM8	91	87.143	ENSMPUG00000007100	-	60	87.143	Mustela_putorius_furo
ENSEASG00005008932	LSM8	62	100.000	ENSMLUG00000006837	-	100	100.000	Myotis_lucifugus
ENSEASG00005008932	LSM8	62	98.958	ENSMLUG00000027762	-	100	98.958	Myotis_lucifugus
ENSEASG00005008932	LSM8	62	100.000	ENSNGAG00000016554	Lsm8	100	100.000	Nannospalax_galili
ENSEASG00005008932	LSM8	62	92.708	ENSNBRG00000014441	lsm8	100	92.708	Neolamprologus_brichardi
ENSEASG00005008932	LSM8	62	100.000	ENSNLEG00000011768	LSM8	100	100.000	Nomascus_leucogenys
ENSEASG00005008932	LSM8	62	88.542	ENSMEUG00000007801	LSM8	100	88.542	Notamacropus_eugenii
ENSEASG00005008932	LSM8	55	100.000	ENSOPRG00000014809	LSM8	100	100.000	Ochotona_princeps
ENSEASG00005008932	LSM8	56	82.558	ENSODEG00000020290	-	100	82.558	Octodon_degus
ENSEASG00005008932	LSM8	62	100.000	ENSODEG00000000418	-	100	100.000	Octodon_degus
ENSEASG00005008932	LSM8	62	98.958	ENSOANG00000014536	LSM8	100	98.958	Ornithorhynchus_anatinus
ENSEASG00005008932	LSM8	62	98.969	ENSOCUG00000017359	LSM8	100	98.969	Oryctolagus_cuniculus
ENSEASG00005008932	LSM8	62	82.292	ENSORLG00000017432	lsm8	100	82.292	Oryzias_latipes
ENSEASG00005008932	LSM8	62	82.292	ENSORLG00020004376	lsm8	100	82.292	Oryzias_latipes_hni
ENSEASG00005008932	LSM8	62	92.708	ENSORLG00015003757	lsm8	100	92.708	Oryzias_latipes_hsok
ENSEASG00005008932	LSM8	62	81.250	ENSOMEG00000022509	lsm8	100	81.250	Oryzias_melastigma
ENSEASG00005008932	LSM8	62	100.000	ENSOGAG00000013377	LSM8	100	100.000	Otolemur_garnettii
ENSEASG00005008932	LSM8	62	100.000	ENSOARG00000017974	LSM8	100	100.000	Ovis_aries
ENSEASG00005008932	LSM8	62	100.000	ENSPPRG00000006444	LSM8	100	100.000	Panthera_pardus
ENSEASG00005008932	LSM8	62	100.000	ENSPTIG00000004722	LSM8	100	100.000	Panthera_tigris_altaica
ENSEASG00005008932	LSM8	62	93.750	ENSPANG00000019395	-	100	93.750	Papio_anubis
ENSEASG00005008932	LSM8	62	100.000	ENSPANG00000035470	-	100	100.000	Papio_anubis
ENSEASG00005008932	LSM8	55	97.647	ENSPKIG00000006092	lsm8	86	97.647	Paramormyrops_kingsleyae
ENSEASG00005008932	LSM8	60	100.000	ENSPCIG00000021467	LSM8	98	100.000	Phascolarctos_cinereus
ENSEASG00005008932	LSM8	62	91.667	ENSPFOG00000012340	lsm8	100	91.667	Poecilia_formosa
ENSEASG00005008932	LSM8	55	94.118	ENSPLAG00000000516	lsm8	89	94.118	Poecilia_latipinna
ENSEASG00005008932	LSM8	62	91.667	ENSPMEG00000022567	lsm8	100	91.667	Poecilia_mexicana
ENSEASG00005008932	LSM8	62	100.000	ENSPPYG00000017942	LSM8	100	100.000	Pongo_abelii
ENSEASG00005008932	LSM8	62	100.000	ENSPCOG00000003309	-	100	100.000	Propithecus_coquereli
ENSEASG00005008932	LSM8	62	77.895	ENSPCOG00000017982	-	99	77.895	Propithecus_coquereli
ENSEASG00005008932	LSM8	55	98.824	ENSPVAG00000000990	LSM8	100	98.824	Pteropus_vampyrus
ENSEASG00005008932	LSM8	62	92.708	ENSPNYG00000011448	lsm8	100	92.708	Pundamilia_nyererei
ENSEASG00005008932	LSM8	62	94.792	ENSPNAG00000010252	lsm8	100	94.792	Pygocentrus_nattereri
ENSEASG00005008932	LSM8	62	100.000	ENSRNOG00000058677	Lsm8	100	100.000	Rattus_norvegicus
ENSEASG00005008932	LSM8	62	100.000	ENSRBIG00000032851	LSM8	100	100.000	Rhinopithecus_bieti
ENSEASG00005008932	LSM8	62	100.000	ENSRROG00000039618	LSM8	100	100.000	Rhinopithecus_roxellana
ENSEASG00005008932	LSM8	62	100.000	ENSSBOG00000023223	LSM8	100	100.000	Saimiri_boliviensis_boliviensis
ENSEASG00005008932	LSM8	62	100.000	ENSSHAG00000018435	-	100	100.000	Sarcophilus_harrisii
ENSEASG00005008932	LSM8	62	91.667	ENSSFOG00015004412	lsm8	100	91.667	Scleropages_formosus
ENSEASG00005008932	LSM8	62	92.708	ENSSDUG00000014702	lsm8	100	92.708	Seriola_dumerili
ENSEASG00005008932	LSM8	62	100.000	ENSSPUG00000017419	LSM8	100	100.000	Sphenodon_punctatus
ENSEASG00005008932	LSM8	62	92.708	ENSSPAG00000021422	lsm8	100	92.708	Stegastes_partitus
ENSEASG00005008932	LSM8	62	100.000	ENSSSCG00000021652	LSM8	100	100.000	Sus_scrofa
ENSEASG00005008932	LSM8	62	97.917	ENSTGUG00000004730	-	100	97.917	Taeniopygia_guttata
ENSEASG00005008932	LSM8	62	96.875	ENSTGUG00000016823	-	100	96.875	Taeniopygia_guttata
ENSEASG00005008932	LSM8	62	92.708	ENSTRUG00000025192	lsm8	100	92.708	Takifugu_rubripes
ENSEASG00005008932	LSM8	62	92.708	ENSTNIG00000002864	lsm8	100	92.708	Tetraodon_nigroviridis
ENSEASG00005008932	LSM8	62	100.000	ENSTTRG00000001023	LSM8	100	100.000	Tursiops_truncatus
ENSEASG00005008932	LSM8	55	100.000	ENSUAMG00000006943	-	89	100.000	Ursus_americanus
ENSEASG00005008932	LSM8	55	100.000	ENSUMAG00000003073	LSM8	90	100.000	Ursus_maritimus
ENSEASG00005008932	LSM8	62	100.000	ENSVPAG00000001530	LSM8	100	100.000	Vicugna_pacos
ENSEASG00005008932	LSM8	58	96.629	ENSXETG00000021829	lsm8	92	96.629	Xenopus_tropicalis
ENSEASG00005008932	LSM8	62	89.583	ENSXCOG00000012938	lsm8	100	89.583	Xiphophorus_couchianus
ENSEASG00005008932	LSM8	62	91.667	ENSXMAG00000025919	lsm8	100	91.667	Xiphophorus_maculatus