EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005009281 (Gene tree)
Gene ID: -
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 6773 bases
Position: chrPSZQ01001389.1:728854-735626
Accession: 9785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005013311	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005014457	RAB5C-201	3618	-	ENSEASP00005013311	216 (aa)	-	-

Gene Model

Click here to download ENSEASG00005009281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005009281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005009281	RAB5C	73	36.250	ENSEASG00005019924	RAB36	51	36.250
ENSEASG00005009281	RAB5C	89	43.137	ENSEASG00005003708	-	94	43.137
ENSEASG00005009281	RAB5C	93	38.647	ENSEASG00005007864	RAB33B	89	38.647
ENSEASG00005009281	RAB5C	90	48.969	ENSEASG00005023252	RAB22A	98	48.969
ENSEASG00005009281	RAB5C	89	35.644	ENSEASG00005008666	RAB15	95	35.644
ENSEASG00005009281	RAB5C	89	34.343	ENSEASG00005002563	RAB9B	97	34.343
ENSEASG00005009281	RAB5C	94	40.385	ENSEASG00005017944	RAB6A	98	40.385
ENSEASG00005009281	RAB5C	89	44.330	ENSEASG00005004933	RAB1B	96	44.330
ENSEASG00005009281	RAB5C	55	31.967	ENSEASG00005013084	ARL8B	62	31.967
ENSEASG00005009281	RAB5C	78	42.012	ENSEASG00005012754	RAB30	83	42.012
ENSEASG00005009281	RAB5C	89	43.878	ENSEASG00005007298	RAB1A	95	43.878
ENSEASG00005009281	RAB5C	75	36.585	ENSEASG00005016822	RAB39B	77	36.585
ENSEASG00005009281	RAB5C	73	30.061	ENSEASG00005010598	DNAJC27	60	30.061
ENSEASG00005009281	RAB5C	75	44.720	ENSEASG00005016261	RAB2A	92	38.462
ENSEASG00005009281	RAB5C	77	42.442	ENSEASG00005006800	RAB7A	83	42.442
ENSEASG00005009281	RAB5C	100	87.500	ENSEASG00005005818	RAB5A	100	87.500
ENSEASG00005009281	RAB5C	86	38.806	ENSEASG00005002926	RAB12	70	34.975
ENSEASG00005009281	RAB5C	77	33.333	ENSEASG00005014613	RERG	84	33.333
ENSEASG00005009281	RAB5C	70	46.053	ENSEASG00005011485	RAB2B	79	46.053
ENSEASG00005009281	RAB5C	71	35.948	ENSEASG00005008239	-	67	35.948
ENSEASG00005009281	RAB5C	89	35.354	ENSEASG00005016494	RAB9A	97	35.354
ENSEASG00005009281	RAB5C	77	32.934	ENSEASG00005013898	KRAS	95	30.387
ENSEASG00005009281	RAB5C	75	40.361	ENSEASG00005007682	RAB33A	70	40.361
ENSEASG00005009281	RAB5C	73	31.250	ENSEASG00005009898	RAB34	62	31.250
ENSEASG00005009281	RAB5C	76	42.683	ENSEASG00005021919	RAB14	76	42.683
ENSEASG00005009281	RAB5C	72	33.121	ENSEASG00005001996	RHEB	85	33.121
ENSEASG00005009281	RAB5C	85	41.622	ENSEASG00005007164	RAB18	94	39.594
ENSEASG00005009281	RAB5C	89	41.791	ENSEASG00005019133	RAB25	93	41.791
ENSEASG00005009281	RAB5C	81	36.207	ENSEASG00005003529	RAB23	73	36.207
ENSEASG00005009281	RAB5C	69	40.397	ENSEASG00005019032	-	89	40.397
ENSEASG00005009281	RAB5C	90	41.748	ENSEASG00005006431	RAB11A	94	41.748
ENSEASG00005009281	RAB5C	89	37.500	ENSEASG00005000683	-	95	37.500
ENSEASG00005009281	RAB5C	83	30.000	ENSEASG00005006279	NRAS	94	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005009281	RAB5C	100	99.074	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSEASG00005009281	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSEASG00005009281	RAB5C	100	99.537	ENSAMEG00000006003	RAB5C	100	99.537	Ailuropoda_melanoleuca
ENSEASG00005009281	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSEASG00005009281	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSEASG00005009281	RAB5C	97	89.100	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSEASG00005009281	RAB5C	100	89.908	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSEASG00005009281	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSEASG00005009281	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSEASG00005009281	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSEASG00005009281	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.476	Astyanax_mexicanus
ENSEASG00005009281	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	99	90.826	Astyanax_mexicanus
ENSEASG00005009281	RAB5C	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSEASG00005009281	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSEASG00005009281	RAB5C	100	99.074	ENSCAFG00000015629	RAB5C	100	99.074	Canis_familiaris
ENSEASG00005009281	RAB5C	100	99.074	ENSCAFG00020013537	RAB5C	100	99.074	Canis_lupus_dingo
ENSEASG00005009281	RAB5C	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSEASG00005009281	RAB5C	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSEASG00005009281	RAB5C	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSEASG00005009281	RAB5C	100	99.074	ENSCATG00000040873	RAB5C	100	99.074	Cercocebus_atys
ENSEASG00005009281	RAB5C	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSEASG00005009281	RAB5C	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSEASG00005009281	RAB5C	100	75.926	ENSCING00000003340	-	99	75.926	Ciona_intestinalis
ENSEASG00005009281	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSEASG00005009281	RAB5C	100	98.148	ENSCGRG00001014226	Rab5c	100	98.148	Cricetulus_griseus_chok1gshd
ENSEASG00005009281	RAB5C	100	98.148	ENSCGRG00000007534	Rab5c	100	98.148	Cricetulus_griseus_crigri
ENSEASG00005009281	RAB5C	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSEASG00005009281	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSEASG00005009281	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSEASG00005009281	RAB5C	100	98.611	ENSDORG00000006819	Rab5c	100	98.611	Dipodomys_ordii
ENSEASG00005009281	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSEASG00005009281	RAB5C	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSEASG00005009281	RAB5C	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSEASG00005009281	RAB5C	100	99.074	ENSEEUG00000002790	RAB5C	100	99.074	Erinaceus_europaeus
ENSEASG00005009281	RAB5C	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSEASG00005009281	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSEASG00005009281	RAB5C	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSEASG00005009281	RAB5C	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSEASG00005009281	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSEASG00005009281	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSEASG00005009281	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSEASG00005009281	RAB5C	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSEASG00005009281	RAB5C	99	89.815	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSEASG00005009281	RAB5C	96	90.952	ENSGAFG00000003642	-	99	87.783	Gambusia_affinis
ENSEASG00005009281	RAB5C	87	94.681	ENSGACG00000008659	rab5c	99	86.175	Gasterosteus_aculeatus
ENSEASG00005009281	RAB5C	100	99.074	ENSGGOG00000005472	RAB5C	100	99.074	Gorilla_gorilla
ENSEASG00005009281	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSEASG00005009281	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSEASG00005009281	RAB5C	100	94.907	ENSHGLG00000012067	RAB5C	100	94.907	Heterocephalus_glaber_female
ENSEASG00005009281	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSEASG00005009281	RAB5C	97	81.604	ENSHCOG00000020238	-	100	80.000	Hippocampus_comes
ENSEASG00005009281	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSEASG00005009281	RAB5C	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSEASG00005009281	RAB5C	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSEASG00005009281	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSEASG00005009281	RAB5C	99	88.018	ENSKMAG00000017417	-	99	88.018	Kryptolebias_marmoratus
ENSEASG00005009281	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSEASG00005009281	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSEASG00005009281	RAB5C	99	92.991	ENSLOCG00000012566	rab5c	100	92.991	Lepisosteus_oculatus
ENSEASG00005009281	RAB5C	100	99.074	ENSMFAG00000039627	RAB5C	100	99.074	Macaca_fascicularis
ENSEASG00005009281	RAB5C	100	99.074	ENSMNEG00000000355	RAB5C	100	99.074	Macaca_nemestrina
ENSEASG00005009281	RAB5C	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSEASG00005009281	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSEASG00005009281	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSEASG00005009281	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSEASG00005009281	RAB5C	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSEASG00005009281	RAB5C	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSEASG00005009281	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSEASG00005009281	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSEASG00005009281	RAB5C	99	87.156	ENSMALG00000022348	-	99	87.156	Monopterus_albus
ENSEASG00005009281	RAB5C	97	83.886	ENSMALG00000006052	rab5c	96	83.721	Monopterus_albus
ENSEASG00005009281	RAB5C	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSEASG00005009281	RAB5C	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSEASG00005009281	RAB5C	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSEASG00005009281	RAB5C	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSEASG00005009281	RAB5C	100	99.537	ENSMPUG00000010554	RAB5C	100	99.537	Mustela_putorius_furo
ENSEASG00005009281	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSEASG00005009281	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSEASG00005009281	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSEASG00005009281	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSEASG00005009281	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSEASG00005009281	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSEASG00005009281	RAB5C	100	88.532	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSEASG00005009281	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSEASG00005009281	RAB5C	100	88.532	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSEASG00005009281	RAB5C	100	88.532	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSEASG00005009281	RAB5C	100	99.074	ENSOGAG00000009456	RAB5C	100	99.074	Otolemur_garnettii
ENSEASG00005009281	RAB5C	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSEASG00005009281	RAB5C	100	99.074	ENSPPAG00000037206	RAB5C	100	99.074	Pan_paniscus
ENSEASG00005009281	RAB5C	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSEASG00005009281	RAB5C	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSEASG00005009281	RAB5C	100	99.074	ENSPTRG00000009194	RAB5C	100	99.074	Pan_troglodytes
ENSEASG00005009281	RAB5C	99	88.837	ENSPKIG00000001237	-	99	88.837	Paramormyrops_kingsleyae
ENSEASG00005009281	RAB5C	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSEASG00005009281	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	89.573	Periophthalmus_magnuspinnatus
ENSEASG00005009281	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSEASG00005009281	RAB5C	99	80.000	ENSPMAG00000001399	rab5c	100	80.000	Petromyzon_marinus
ENSEASG00005009281	RAB5C	99	78.972	ENSPMAG00000007867	rab5c	99	78.972	Petromyzon_marinus
ENSEASG00005009281	RAB5C	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSEASG00005009281	RAB5C	100	97.222	ENSPCIG00000020225	-	100	97.222	Phascolarctos_cinereus
ENSEASG00005009281	RAB5C	99	89.815	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSEASG00005009281	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSEASG00005009281	RAB5C	98	88.732	ENSPMEG00000012614	-	99	87.783	Poecilia_mexicana
ENSEASG00005009281	RAB5C	99	89.815	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSEASG00005009281	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSEASG00005009281	RAB5C	99	89.815	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSEASG00005009281	RAB5C	100	99.074	ENSPPYG00000008398	RAB5C	100	99.074	Pongo_abelii
ENSEASG00005009281	RAB5C	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSEASG00005009281	RAB5C	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSEASG00005009281	RAB5C	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSEASG00005009281	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSEASG00005009281	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSEASG00005009281	RAB5C	99	90.783	ENSPNAG00000028138	rab5c	98	90.783	Pygocentrus_nattereri
ENSEASG00005009281	RAB5C	97	86.792	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSEASG00005009281	RAB5C	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSEASG00005009281	RAB5C	100	99.074	ENSRBIG00000031376	RAB5C	100	99.074	Rhinopithecus_bieti
ENSEASG00005009281	RAB5C	100	99.074	ENSRROG00000032895	RAB5C	100	99.074	Rhinopithecus_roxellana
ENSEASG00005009281	RAB5C	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSEASG00005009281	RAB5C	100	97.685	ENSSHAG00000005267	-	100	97.685	Sarcophilus_harrisii
ENSEASG00005009281	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSEASG00005009281	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSEASG00005009281	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSEASG00005009281	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSEASG00005009281	RAB5C	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSEASG00005009281	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSEASG00005009281	RAB5C	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSEASG00005009281	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	89.815	Takifugu_rubripes
ENSEASG00005009281	RAB5C	96	90.431	ENSTNIG00000011711	rab5c	95	90.431	Tetraodon_nigroviridis
ENSEASG00005009281	RAB5C	100	99.074	ENSTBEG00000007092	RAB5C	100	99.074	Tupaia_belangeri
ENSEASG00005009281	RAB5C	100	98.148	ENSTTRG00000006673	RAB5C	100	98.148	Tursiops_truncatus
ENSEASG00005009281	RAB5C	100	99.537	ENSUAMG00000024343	RAB5C	100	99.537	Ursus_americanus
ENSEASG00005009281	RAB5C	100	99.537	ENSUMAG00000023270	RAB5C	100	99.537	Ursus_maritimus
ENSEASG00005009281	RAB5C	96	91.429	ENSXCOG00000006300	-	99	87.838	Xiphophorus_couchianus
ENSEASG00005009281	RAB5C	99	89.352	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSEASG00005009281	RAB5C	99	89.815	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus
ENSEASG00005009281	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus