EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSEASG00005009372 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Equus_asinus_asinus
Status
putative
Strand
Minus strand
Length
47847 bases
Position
chrPSZQ01008525.1:1213210-1261056
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEASP00005013560tRNA_anti-codonPF01336.251e-1211
ENSEASP00005013554tRNA_anti-codonPF01336.251.1e-1211
ENSEASP00005013574tRNA_anti-codonPF01336.251.1e-1211
ENSEASP00005013570tRNA_anti-codonPF01336.251.1e-1211
ENSEASP00005013473tRNA_anti-codonPF01336.251.4e-1211
ENSEASP00005013553tRNA_anti-codonPF01336.251.5e-1211
ENSEASP00005013552tRNA_anti-codonPF01336.251.5e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEAST00005014636RPA1-2011851-ENSEASP00005013473616 (aa)--
ENSEAST00005014735RPA1-2061575-ENSEASP00005013570524 (aa)--
ENSEAST00005014725RPA1-2051674-ENSEASP00005013560557 (aa)--
ENSEAST00005014719RPA1-2041719-ENSEASP00005013554572 (aa)--
ENSEAST00005014718RPA1-2031860-ENSEASP00005013553619 (aa)--
ENSEAST00005014717RPA1-2021875-ENSEASP00005013552624 (aa)--
ENSEAST00005014739RPA1-2071719-ENSEASP00005013574572 (aa)--
Gene Model
Click here to download ENSEASG00005009372's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005009372's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEASG00005009372RPA19962.613ENSAPOG00000019409RPA19159.748Acanthochromis_polyacanthus
ENSEASG00005009372RPA19964.401ENSAPOG00000011658rpa19964.516Acanthochromis_polyacanthus
ENSEASG00005009372RPA110090.645ENSAMEG00000007706RPA19892.422Ailuropoda_melanoleuca
ENSEASG00005009372RPA19958.554ENSACIG00000007277rpa19958.834Amphilophus_citrinellus
ENSEASG00005009372RPA19957.686ENSACIG00000012881RPA19958.844Amphilophus_citrinellus
ENSEASG00005009372RPA19964.937ENSAOCG00000023376rpa19964.758Amphiprion_ocellaris
ENSEASG00005009372RPA19963.182ENSAOCG00000009003RPA19754.690Amphiprion_ocellaris
ENSEASG00005009372RPA19963.864ENSAPEG00000019132RPA19753.333Amphiprion_percula
ENSEASG00005009372RPA19964.758ENSAPEG00000008634rpa19964.580Amphiprion_percula
ENSEASG00005009372RPA19966.370ENSATEG00000022024rpa19966.192Anabas_testudineus
ENSEASG00005009372RPA19965.509ENSATEG00000006443RPA19655.962Anabas_testudineus
ENSEASG00005009372RPA19966.913ENSAPLG00000012442RPA110066.765Anas_platyrhynchos
ENSEASG00005009372RPA19964.846ENSACAG00000014490RPA19765.188Anolis_carolinensis
ENSEASG00005009372RPA110091.434ENSANAG00000023456RPA110091.434Aotus_nancymaae
ENSEASG00005009372RPA19964.955ENSACLG00000005223RPA19464.955Astatotilapia_calliptera
ENSEASG00005009372RPA19966.007ENSACLG00000006640rpa19965.827Astatotilapia_calliptera
ENSEASG00005009372RPA19964.247ENSAMXG00000008418rpa19964.865Astyanax_mexicanus
ENSEASG00005009372RPA110090.792ENSBTAG00000009711RPA19893.189Bos_taurus
ENSEASG00005009372RPA18630.263WBGene00017546rpa-17230.247Caenorhabditis_elegans
ENSEASG00005009372RPA110088.530ENSCJAG00000001848RPA19890.381Callithrix_jacchus
ENSEASG00005009372RPA110090.145ENSCAFG00000019249RPA19892.359Canis_familiaris
ENSEASG00005009372RPA110090.145ENSCAFG00020009847RPA19892.359Canis_lupus_dingo
ENSEASG00005009372RPA19992.508ENSCHIG00000026308RPA19992.508Capra_hircus
ENSEASG00005009372RPA110089.677ENSTSYG00000003482-9891.874Carlito_syrichta
ENSEASG00005009372RPA110085.945ENSCPOG00000000035RPA19888.040Cavia_porcellus
ENSEASG00005009372RPA110077.653ENSCCAG00000010981RPA19879.208Cebus_capucinus
ENSEASG00005009372RPA19789.203ENSCLAG00000005185-9889.203Chinchilla_lanigera
ENSEASG00005009372RPA110082.068ENSCLAG00000015045-9883.887Chinchilla_lanigera
ENSEASG00005009372RPA110076.206ENSCSAG00000013833RPA19878.454Chlorocebus_sabaeus
ENSEASG00005009372RPA18492.483ENSCHOG00000009454-10092.483Choloepus_hoffmanni
ENSEASG00005009372RPA19886.589ENSCHOG00000013540-9988.547Choloepus_hoffmanni
ENSEASG00005009372RPA19878.347ENSCPBG00000020377RPA19979.335Chrysemys_picta_bellii
ENSEASG00005009372RPA19942.399ENSCING00000023482-9742.244Ciona_intestinalis
ENSEASG00005009372RPA110091.259ENSCANG00000030911RPA19991.259Colobus_angolensis_palliatus
ENSEASG00005009372RPA19889.892ENSCGRG00001008197Rpa19888.487Cricetulus_griseus_chok1gshd
ENSEASG00005009372RPA18890.260ENSCGRG00000000582Rpa19987.771Cricetulus_griseus_crigri
ENSEASG00005009372RPA19851.689ENSCSEG00000012726RPA19853.608Cynoglossus_semilaevis
ENSEASG00005009372RPA19962.589ENSCSEG00000013066rpa19861.167Cynoglossus_semilaevis
ENSEASG00005009372RPA19564.423ENSCVAG00000013446-8764.423Cyprinodon_variegatus
ENSEASG00005009372RPA19964.098ENSCVAG00000019431rpa19965.225Cyprinodon_variegatus
ENSEASG00005009372RPA19963.908ENSDARG00000003938rpa19863.833Danio_rerio
ENSEASG00005009372RPA19891.074ENSDNOG00000017218RPA19891.074Dasypus_novemcinctus
ENSEASG00005009372RPA110088.530ENSDORG00000006199Rpa19890.698Dipodomys_ordii
ENSEASG00005009372RPA19842.755FBgn0010173RpA-709742.150Drosophila_melanogaster
ENSEASG00005009372RPA18387.629ENSETEG00000017608RPA18088.421Echinops_telfairi
ENSEASG00005009372RPA110096.931ENSECAG00000023886RPA19899.003Equus_caballus
ENSEASG00005009372RPA18092.619ENSEEUG00000002186-6892.619Erinaceus_europaeus
ENSEASG00005009372RPA19359.459ENSELUG00000006136RPA19959.375Esox_lucius
ENSEASG00005009372RPA19962.632ENSELUG00000021071rpa19861.794Esox_lucius
ENSEASG00005009372RPA110088.710ENSFCAG00000006306RPA19890.547Felis_catus
ENSEASG00005009372RPA110073.710ENSFALG00000006575RPA19874.877Ficedula_albicollis
ENSEASG00005009372RPA19987.520ENSFDAG00000007720RPA19889.386Fukomys_damarensis
ENSEASG00005009372RPA19961.754ENSFHEG00000003580rpa19662.906Fundulus_heteroclitus
ENSEASG00005009372RPA19962.862ENSGMOG00000010382rpa19861.646Gadus_morhua
ENSEASG00005009372RPA110073.544ENSGALG00000003072RPA19874.794Gallus_gallus
ENSEASG00005009372RPA19864.685ENSGAFG00000012916rpa19664.134Gambusia_affinis
ENSEASG00005009372RPA19464.465ENSGAFG00000020953RPA19855.247Gambusia_affinis
ENSEASG00005009372RPA19961.649ENSGACG00000010856rpa19861.000Gasterosteus_aculeatus
ENSEASG00005009372RPA19878.347ENSGAGG00000013611RPA19878.347Gopherus_agassizii
ENSEASG00005009372RPA110092.308ENSGGOG00000014186RPA19892.308Gorilla_gorilla
ENSEASG00005009372RPA19965.714ENSHBUG00000017773rpa19664.676Haplochromis_burtoni
ENSEASG00005009372RPA19956.150ENSHBUG00000009348RPA19956.153Haplochromis_burtoni
ENSEASG00005009372RPA19789.535ENSHGLG00000008846RPA19889.386Heterocephalus_glaber_female
ENSEASG00005009372RPA110082.229ENSHGLG00100000799-9884.219Heterocephalus_glaber_male
ENSEASG00005009372RPA110074.798ENSHGLG00100002005-9876.451Heterocephalus_glaber_male
ENSEASG00005009372RPA19789.535ENSHGLG00100017755-9889.386Heterocephalus_glaber_male
ENSEASG00005009372RPA19961.207ENSHCOG00000001401rpa19661.551Hippocampus_comes
ENSEASG00005009372RPA19946.847ENSHCOG00000000351RPA19646.585Hippocampus_comes
ENSEASG00005009372RPA19962.609ENSIPUG00000004400rpa19762.647Ictalurus_punctatus
ENSEASG00005009372RPA19884.390ENSSTOG00000022475RPA19984.390Ictidomys_tridecemlineatus
ENSEASG00005009372RPA19888.411ENSJJAG00000000876Rpa19890.444Jaculus_jaculus
ENSEASG00005009372RPA19956.672ENSKMAG00000000234RPA19656.485Kryptolebias_marmoratus
ENSEASG00005009372RPA19861.606ENSKMAG00000005605rpa19662.925Kryptolebias_marmoratus
ENSEASG00005009372RPA19964.845ENSLBEG00000021604rpa19664.528Labrus_bergylta
ENSEASG00005009372RPA19962.585ENSLBEG00000002281RPA18960.211Labrus_bergylta
ENSEASG00005009372RPA18669.451ENSLACG00000007210RPA19965.800Latimeria_chalumnae
ENSEASG00005009372RPA19968.310ENSLOCG00000006397rpa19668.074Lepisosteus_oculatus
ENSEASG00005009372RPA19891.775ENSLAFG00000015354RPA19890.507Loxodonta_africana
ENSEASG00005009372RPA18388.867ENSMFAG00000036138-10090.730Macaca_fascicularis
ENSEASG00005009372RPA110081.438ENSMMUG00000002442-9883.139Macaca_mulatta
ENSEASG00005009372RPA110087.728ENSMMUG00000011604-9990.248Macaca_mulatta
ENSEASG00005009372RPA19986.724ENSMNEG00000031632-9888.983Macaca_nemestrina
ENSEASG00005009372RPA110083.270ENSMNEG00000029837-9888.710Macaca_nemestrina
ENSEASG00005009372RPA19893.750ENSMLEG00000038768-9983.828Mandrillus_leucophaeus
ENSEASG00005009372RPA19762.963ENSMAMG00000020097RPA19652.769Mastacembelus_armatus
ENSEASG00005009372RPA19965.642ENSMAMG00000017993rpa19966.241Mastacembelus_armatus
ENSEASG00005009372RPA19964.437ENSMZEG00005007551rpa19862.775Maylandia_zebra
ENSEASG00005009372RPA19964.955ENSMZEG00005024731RPA19464.955Maylandia_zebra
ENSEASG00005009372RPA110073.544ENSMGAG00000005315RPA19874.794Meleagris_gallopavo
ENSEASG00005009372RPA19987.825ENSMAUG00000010474Rpa110089.684Mesocricetus_auratus
ENSEASG00005009372RPA110089.822ENSMICG00000012867RPA19892.193Microcebus_murinus
ENSEASG00005009372RPA19893.750ENSMOCG00000013019Rpa19889.203Microtus_ochrogaster
ENSEASG00005009372RPA19962.434ENSMMOG00000014292rpa19962.437Mola_mola
ENSEASG00005009372RPA19957.857ENSMMOG00000010868RPA19757.290Mola_mola
ENSEASG00005009372RPA19885.314ENSMODG00000010549RPA19885.314Monodelphis_domestica
ENSEASG00005009372RPA19964.664ENSMALG00000011453rpa19665.424Monopterus_albus
ENSEASG00005009372RPA19760.754ENSMALG00000001208RPA18360.802Monopterus_albus
ENSEASG00005009372RPA19888.387MGP_CAROLIEiJ_G0016734Rpa19887.294Mus_caroli
ENSEASG00005009372RPA19988.817ENSMUSG00000000751Rpa19984.853Mus_musculus
ENSEASG00005009372RPA19986.334MGP_PahariEiJ_G0017871Rpa19888.177Mus_pahari
ENSEASG00005009372RPA19989.032MGP_SPRETEiJ_G0017577Rpa19984.878Mus_spretus
ENSEASG00005009372RPA110089.984ENSMPUG00000013119RPA19892.027Mustela_putorius_furo
ENSEASG00005009372RPA19988.943ENSMLUG00000006113RPA19690.787Myotis_lucifugus
ENSEASG00005009372RPA19886.612ENSNGAG00000004522Rpa19388.737Nannospalax_galili
ENSEASG00005009372RPA19957.699ENSNBRG00000009672RPA19656.928Neolamprologus_brichardi
ENSEASG00005009372RPA19965.714ENSNBRG00000020595rpa19965.536Neolamprologus_brichardi
ENSEASG00005009372RPA110087.399ENSNLEG00000017149RPA19890.050Nomascus_leucogenys
ENSEASG00005009372RPA19972.771ENSMEUG00000006714RPA19974.376Notamacropus_eugenii
ENSEASG00005009372RPA19983.531ENSODEG00000009038RPA19686.387Octodon_degus
ENSEASG00005009372RPA19963.574ENSONIG00000013135rpa19763.036Oreochromis_niloticus
ENSEASG00005009372RPA19982.524ENSOANG00000010880RPA19983.940Ornithorhynchus_anatinus
ENSEASG00005009372RPA19992.903ENSOCUG00000001504RPA19887.994Oryctolagus_cuniculus
ENSEASG00005009372RPA19963.431ENSORLG00000003368RPA19654.344Oryzias_latipes
ENSEASG00005009372RPA19963.540ENSORLG00000004856rpa19863.255Oryzias_latipes
ENSEASG00005009372RPA19962.556ENSORLG00020015284RPA19653.023Oryzias_latipes_hni
ENSEASG00005009372RPA19963.717ENSORLG00020008980rpa19863.423Oryzias_latipes_hni
ENSEASG00005009372RPA19963.717ENSORLG00015013982rpa19863.423Oryzias_latipes_hsok
ENSEASG00005009372RPA18160.514ENSORLG00015005867-9760.514Oryzias_latipes_hsok
ENSEASG00005009372RPA19961.087ENSORLG00015020383RPA19654.911Oryzias_latipes_hsok
ENSEASG00005009372RPA19958.259ENSOMEG00000011040RPA19958.259Oryzias_melastigma
ENSEASG00005009372RPA19961.484ENSOMEG00000004704rpa19959.578Oryzias_melastigma
ENSEASG00005009372RPA19489.706ENSOGAG00000029379-9793.651Otolemur_garnettii
ENSEASG00005009372RPA19893.750ENSOGAG00000005581-9891.362Otolemur_garnettii
ENSEASG00005009372RPA110090.468ENSOARG00000014479RPA19893.023Ovis_aries
ENSEASG00005009372RPA110087.884ENSPPAG00000039680RPA19890.381Pan_paniscus
ENSEASG00005009372RPA110088.226ENSPPRG00000011807RPA19890.050Panthera_pardus
ENSEASG00005009372RPA110087.903ENSPTIG00000007898RPA19889.718Panthera_tigris_altaica
ENSEASG00005009372RPA110087.884ENSPTRG00000008539RPA19890.381Pan_troglodytes
ENSEASG00005009372RPA19989.106ENSPANG00000024592RPA19890.083Papio_anubis
ENSEASG00005009372RPA19361.781ENSPKIG00000008053rpa19262.500Paramormyrops_kingsleyae
ENSEASG00005009372RPA19976.471ENSPSIG00000015617RPA19977.704Pelodiscus_sinensis
ENSEASG00005009372RPA19857.636ENSPMGG00000000543RPA19957.246Periophthalmus_magnuspinnatus
ENSEASG00005009372RPA19966.062ENSPMGG00000011589rpa19865.653Periophthalmus_magnuspinnatus
ENSEASG00005009372RPA19889.892ENSPEMG00000021061Rpa19889.386Peromyscus_maniculatus_bairdii
ENSEASG00005009372RPA19982.060ENSPCIG00000019049RPA19883.690Phascolarctos_cinereus
ENSEASG00005009372RPA19863.588ENSPFOG00000003987rpa19664.334Poecilia_formosa
ENSEASG00005009372RPA19164.619ENSPLAG00000008844-9455.241Poecilia_latipinna
ENSEASG00005009372RPA19863.410ENSPLAG00000004984rpa19663.993Poecilia_latipinna
ENSEASG00005009372RPA18964.619ENSPMEG00000003627-9355.075Poecilia_mexicana
ENSEASG00005009372RPA19863.588ENSPMEG00000020602rpa19964.107Poecilia_mexicana
ENSEASG00005009372RPA19355.910ENSPREG00000010174rpa19555.752Poecilia_reticulata
ENSEASG00005009372RPA19564.465ENSPREG00000010119RPA19261.331Poecilia_reticulata
ENSEASG00005009372RPA110090.792ENSPCOG00000001799RPA19893.189Propithecus_coquereli
ENSEASG00005009372RPA110090.307ENSPVAG00000002149RPA19892.525Pteropus_vampyrus
ENSEASG00005009372RPA19964.732ENSPNYG00000024165RPA19464.732Pundamilia_nyererei
ENSEASG00005009372RPA19965.950ENSPNYG00000016316rpa19965.771Pundamilia_nyererei
ENSEASG00005009372RPA19660.976ENSPNAG00000008599rpa19755.385Pygocentrus_nattereri
ENSEASG00005009372RPA19989.372ENSRNOG00000003123Rpa19889.055Rattus_norvegicus
ENSEASG00005009372RPA110087.581ENSRBIG00000036587RPA19889.421Rhinopithecus_bieti
ENSEASG00005009372RPA110081.935ENSRROG00000043278RPA19883.636Rhinopithecus_roxellana
ENSEASG00005009372RPA19732.937YAR007CRFA19531.588Saccharomyces_cerevisiae
ENSEASG00005009372RPA110084.330ENSSBOG00000030233RPA19986.070Saimiri_boliviensis_boliviensis
ENSEASG00005009372RPA19885.667ENSSHAG00000007969RPA19785.997Sarcophilus_harrisii
ENSEASG00005009372RPA19964.613ENSSFOG00015005362rpa19065.604Scleropages_formosus
ENSEASG00005009372RPA19562.955ENSSMAG00000019746RPA19751.926Scophthalmus_maximus
ENSEASG00005009372RPA19967.269ENSSDUG00000011949rpa19567.446Seriola_dumerili
ENSEASG00005009372RPA19865.509ENSSDUG00000016358RPA18765.000Seriola_dumerili
ENSEASG00005009372RPA19967.269ENSSLDG00000011806rpa19567.446Seriola_lalandi_dorsalis
ENSEASG00005009372RPA19865.429ENSSLDG00000020784RPA19161.538Seriola_lalandi_dorsalis
ENSEASG00005009372RPA18787.097ENSSARG00000007506RPA18982.353Sorex_araneus
ENSEASG00005009372RPA19973.217ENSSPUG00000007223RPA19974.074Sphenodon_punctatus
ENSEASG00005009372RPA19963.093ENSSPAG00000009903rpa19763.220Stegastes_partitus
ENSEASG00005009372RPA19959.928ENSSPAG00000011165RPA19758.988Stegastes_partitus
ENSEASG00005009372RPA110093.881ENSSSCG00000017822RPA19993.000Sus_scrofa
ENSEASG00005009372RPA19974.261ENSTGUG00000005775RPA19874.465Taeniopygia_guttata
ENSEASG00005009372RPA19964.779ENSTRUG00000003616rpa19764.686Takifugu_rubripes
ENSEASG00005009372RPA19862.850ENSTRUG00000000405RPA18160.349Takifugu_rubripes
ENSEASG00005009372RPA19964.410ENSTNIG00000016199rpa19864.191Tetraodon_nigroviridis
ENSEASG00005009372RPA189100.000ENSTBEG00000002709RPA188100.000Tupaia_belangeri
ENSEASG00005009372RPA19791.860ENSTTRG00000001169RPA19891.860Tursiops_truncatus
ENSEASG00005009372RPA19095.745ENSUAMG00000015676RPA19894.231Ursus_americanus
ENSEASG00005009372RPA110093.881ENSUMAG00000009328RPA19893.881Ursus_maritimus
ENSEASG00005009372RPA110088.853ENSVPAG00000009443RPA19891.030Vicugna_pacos
ENSEASG00005009372RPA110090.145ENSVVUG00000021715RPA19892.359Vulpes_vulpes
ENSEASG00005009372RPA19680.851ENSXETG00000013538rpa19776.254Xenopus_tropicalis
ENSEASG00005009372RPA19361.698ENSXCOG00000010068rpa19461.957Xiphophorus_couchianus
ENSEASG00005009372RPA19957.971ENSXCOG00000009899-9958.094Xiphophorus_couchianus
ENSEASG00005009372RPA19862.167ENSXMAG00000004102rpa19963.540Xiphophorus_maculatus
ENSEASG00005009372RPA19964.465ENSXMAG00000010333RPA18662.151Xiphophorus_maculatus

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