EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005010544 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 13747 bases
Position: chrPSZQ01001361.1:1183923-1197669
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005015090	RRM_1	PF00076.22	6.9e-29	1	3
ENSEASP00005015090	RRM_1	PF00076.22	6.9e-29	2	3
ENSEASP00005015090	RRM_1	PF00076.22	6.9e-29	3	3
ENSEASP00005015088	RRM_1	PF00076.22	1.1e-28	1	3
ENSEASP00005015088	RRM_1	PF00076.22	1.1e-28	2	3
ENSEASP00005015088	RRM_1	PF00076.22	1.1e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005016418	-	1650	-	ENSEASP00005015090	549 (aa)	-	-
ENSEAST00005016416	-	3078	-	ENSEASP00005015088	615 (aa)	-	-

Gene Model

Click here to download ENSEASG00005010544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005010544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005010544	-	60	57.402	ENSEASG00005008158	RAVER2	52	57.402

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005010544	-	100	81.878	ENSG00000161847	RAVER1	93	96.629	Homo_sapiens
ENSEASG00005010544	-	88	93.750	ENSAMEG00000011738	RAVER1	64	92.593	Ailuropoda_melanoleuca
ENSEASG00005010544	-	68	67.553	ENSAOCG00000005128	raver1	50	67.553	Amphiprion_ocellaris
ENSEASG00005010544	-	68	67.553	ENSAPEG00000010854	raver1	53	67.925	Amphiprion_percula
ENSEASG00005010544	-	73	65.099	ENSATEG00000021004	raver1	54	65.099	Anabas_testudineus
ENSEASG00005010544	-	70	89.655	ENSACAG00000008386	-	62	86.667	Anolis_carolinensis
ENSEASG00005010544	-	87	92.180	ENSANAG00000028226	RAVER1	64	94.789	Aotus_nancymaae
ENSEASG00005010544	-	68	68.966	ENSACLG00000018492	raver1	53	69.415	Astatotilapia_calliptera
ENSEASG00005010544	-	71	66.327	ENSAMXG00000005132	raver1	57	66.751	Astyanax_mexicanus
ENSEASG00005010544	-	93	93.256	ENSBTAG00000015721	RAVER1	73	96.000	Bos_taurus
ENSEASG00005010544	-	84	94.789	ENSCJAG00000005671	RAVER1	64	94.789	Callithrix_jacchus
ENSEASG00005010544	-	88	95.782	ENSCAFG00000017861	RAVER1	66	95.782	Canis_familiaris
ENSEASG00005010544	-	91	95.782	ENSCAFG00020024449	RAVER1	68	95.782	Canis_lupus_dingo
ENSEASG00005010544	-	100	82.537	ENSCHIG00000006718	RAVER1	100	82.043	Capra_hircus
ENSEASG00005010544	-	78	96.165	ENSTSYG00000027107	RAVER1	100	80.370	Carlito_syrichta
ENSEASG00005010544	-	89	82.955	ENSCAPG00000002269	RAVER1	97	74.957	Cavia_aperea
ENSEASG00005010544	-	90	88.736	ENSCPOG00000001008	RAVER1	65	93.548	Cavia_porcellus
ENSEASG00005010544	-	84	94.541	ENSCCAG00000031723	RAVER1	64	94.541	Cebus_capucinus
ENSEASG00005010544	-	85	95.533	ENSCATG00000043863	RAVER1	64	95.533	Cercocebus_atys
ENSEASG00005010544	-	90	89.655	ENSCLAG00000009336	RAVER1	66	94.541	Chinchilla_lanigera
ENSEASG00005010544	-	85	95.782	ENSCSAG00000007317	RAVER1	55	95.782	Chlorocebus_sabaeus
ENSEASG00005010544	-	90	79.255	ENSCPBG00000005349	-	67	79.255	Chrysemys_picta_bellii
ENSEASG00005010544	-	85	95.285	ENSCANG00000008337	RAVER1	64	95.285	Colobus_angolensis_palliatus
ENSEASG00005010544	-	93	89.401	ENSCGRG00001013260	-	67	92.029	Cricetulus_griseus_chok1gshd
ENSEASG00005010544	-	93	89.401	ENSCGRG00000015138	-	67	92.029	Cricetulus_griseus_crigri
ENSEASG00005010544	-	66	65.847	ENSCSEG00000021092	raver1	57	64.721	Cynoglossus_semilaevis
ENSEASG00005010544	-	68	67.553	ENSCVAG00000013971	raver1	51	67.553	Cyprinodon_variegatus
ENSEASG00005010544	-	72	63.409	ENSDARG00000052617	raver1	70	69.643	Danio_rerio
ENSEASG00005010544	-	77	85.000	ENSDNOG00000035742	-	64	83.951	Dasypus_novemcinctus
ENSEASG00005010544	-	93	82.629	ENSDORG00000010106	-	100	76.040	Dipodomys_ordii
ENSEASG00005010544	-	90	62.970	ENSETEG00000008201	-	87	89.848	Echinops_telfairi
ENSEASG00005010544	-	70	36.957	ENSEBUG00000003030	RAVER1	53	35.407	Eptatretus_burgeri
ENSEASG00005010544	-	90	95.360	ENSECAG00000024966	RAVER1	65	98.540	Equus_caballus
ENSEASG00005010544	-	65	68.871	ENSELUG00000023287	raver1	55	67.337	Esox_lucius
ENSEASG00005010544	-	88	96.526	ENSFCAG00000009435	RAVER1	100	82.055	Felis_catus
ENSEASG00005010544	-	88	93.781	ENSFDAG00000015113	RAVER1	65	93.781	Fukomys_damarensis
ENSEASG00005010544	-	69	68.504	ENSGMOG00000003649	raver1	54	68.504	Gadus_morhua
ENSEASG00005010544	-	73	65.347	ENSGAFG00000015944	raver1	53	67.095	Gambusia_affinis
ENSEASG00005010544	-	66	67.575	ENSGACG00000013818	raver1	54	66.162	Gasterosteus_aculeatus
ENSEASG00005010544	-	83	75.000	ENSGAGG00000011748	-	56	90.625	Gopherus_agassizii
ENSEASG00005010544	-	85	94.789	ENSGGOG00000006015	RAVER1	64	94.789	Gorilla_gorilla
ENSEASG00005010544	-	68	68.966	ENSHBUG00000021210	raver1	53	69.415	Haplochromis_burtoni
ENSEASG00005010544	-	88	92.289	ENSHGLG00000015460	RAVER1	65	92.289	Heterocephalus_glaber_female
ENSEASG00005010544	-	88	92.289	ENSHGLG00100000812	RAVER1	65	92.289	Heterocephalus_glaber_male
ENSEASG00005010544	-	65	68.524	ENSHCOG00000000449	raver1	52	66.753	Hippocampus_comes
ENSEASG00005010544	-	68	69.067	ENSIPUG00000013153	raver1	52	69.067	Ictalurus_punctatus
ENSEASG00005010544	-	90	91.435	ENSSTOG00000003241	RAVER1	66	95.309	Ictidomys_tridecemlineatus
ENSEASG00005010544	-	89	93.112	ENSJJAG00000018219	-	100	75.788	Jaculus_jaculus
ENSEASG00005010544	-	71	67.519	ENSKMAG00000017355	raver1	53	67.519	Kryptolebias_marmoratus
ENSEASG00005010544	-	71	67.095	ENSLBEG00000008268	raver1	55	67.095	Labrus_bergylta
ENSEASG00005010544	-	77	74.855	ENSLACG00000005809	-	58	74.855	Latimeria_chalumnae
ENSEASG00005010544	-	88	95.274	ENSLAFG00000003664	-	65	95.274	Loxodonta_africana
ENSEASG00005010544	-	85	95.533	ENSMFAG00000037977	RAVER1	64	95.533	Macaca_fascicularis
ENSEASG00005010544	-	85	95.533	ENSMMUG00000014897	RAVER1	100	75.447	Macaca_mulatta
ENSEASG00005010544	-	85	95.533	ENSMNEG00000028390	RAVER1	64	95.533	Macaca_nemestrina
ENSEASG00005010544	-	89	91.803	ENSMLEG00000041959	RAVER1	64	95.533	Mandrillus_leucophaeus
ENSEASG00005010544	-	72	66.244	ENSMAMG00000012059	raver1	53	67.454	Mastacembelus_armatus
ENSEASG00005010544	-	68	68.966	ENSMZEG00005019002	raver1	53	69.415	Maylandia_zebra
ENSEASG00005010544	-	93	88.276	ENSMAUG00000017948	-	65	92.346	Mesocricetus_auratus
ENSEASG00005010544	-	93	91.163	ENSMICG00000010326	RAVER1	69	95.037	Microcebus_murinus
ENSEASG00005010544	-	93	89.607	ENSMOCG00000015553	-	65	93.797	Microtus_ochrogaster
ENSEASG00005010544	-	72	65.823	ENSMMOG00000012093	raver1	54	65.823	Mola_mola
ENSEASG00005010544	-	89	85.266	ENSMODG00000005584	-	64	85.266	Monodelphis_domestica
ENSEASG00005010544	-	65	67.409	ENSMALG00000016569	raver1	53	66.154	Monopterus_albus
ENSEASG00005010544	-	93	87.472	MGP_CAROLIEiJ_G0031860	-	66	91.443	Mus_caroli
ENSEASG00005010544	-	90	87.927	ENSMUSG00000010205	Raver1	66	91.932	Mus_musculus
ENSEASG00005010544	-	90	86.420	MGP_PahariEiJ_G0014726	-	66	91.283	Mus_pahari
ENSEASG00005010544	-	90	87.955	MGP_SPRETEiJ_G0032984	-	67	90.476	Mus_spretus
ENSEASG00005010544	-	88	96.774	ENSMPUG00000006712	RAVER1	64	96.774	Mustela_putorius_furo
ENSEASG00005010544	-	91	95.025	ENSMLUG00000012328	RAVER1	67	95.025	Myotis_lucifugus
ENSEASG00005010544	-	90	87.615	ENSNGAG00000001260	-	67	90.385	Nannospalax_galili
ENSEASG00005010544	-	85	95.037	ENSNLEG00000012181	RAVER1	64	95.037	Nomascus_leucogenys
ENSEASG00005010544	-	75	87.915	ENSMEUG00000003281	-	58	87.915	Notamacropus_eugenii
ENSEASG00005010544	-	88	94.293	ENSODEG00000016260	RAVER1	100	82.255	Octodon_degus
ENSEASG00005010544	-	68	68.883	ENSONIG00000001559	raver1	72	72.321	Oreochromis_niloticus
ENSEASG00005010544	-	91	91.811	ENSOCUG00000020918	RAVER1	65	93.797	Oryctolagus_cuniculus
ENSEASG00005010544	-	70	67.617	ENSORLG00000005458	raver1	53	67.617	Oryzias_latipes
ENSEASG00005010544	-	68	68.351	ENSORLG00020004392	raver1	53	67.183	Oryzias_latipes_hni
ENSEASG00005010544	-	70	67.358	ENSORLG00015017222	raver1	53	67.358	Oryzias_latipes_hsok
ENSEASG00005010544	-	69	68.684	ENSOMEG00000023956	raver1	56	69.333	Oryzias_melastigma
ENSEASG00005010544	-	90	91.163	ENSOGAG00000011071	RAVER1	64	94.789	Otolemur_garnettii
ENSEASG00005010544	-	78	89.767	ENSOARG00000015886	RAVER1	53	93.548	Ovis_aries
ENSEASG00005010544	-	85	95.037	ENSPPAG00000002611	RAVER1	64	95.037	Pan_paniscus
ENSEASG00005010544	-	88	96.526	ENSPPRG00000009912	RAVER1	100	82.219	Panthera_pardus
ENSEASG00005010544	-	85	95.037	ENSPTRG00000010466	RAVER1	64	95.037	Pan_troglodytes
ENSEASG00005010544	-	85	95.533	ENSPANG00000004122	RAVER1	64	95.533	Papio_anubis
ENSEASG00005010544	-	93	89.838	ENSPEMG00000016411	-	65	94.045	Peromyscus_maniculatus_bairdii
ENSEASG00005010544	-	95	86.634	ENSPCIG00000018695	-	68	86.634	Phascolarctos_cinereus
ENSEASG00005010544	-	65	68.802	ENSPFOG00000007016	raver1	54	65.586	Poecilia_formosa
ENSEASG00005010544	-	70	67.866	ENSPLAG00000020793	raver1	55	67.866	Poecilia_latipinna
ENSEASG00005010544	-	70	67.436	ENSPMEG00000011220	raver1	55	67.866	Poecilia_mexicana
ENSEASG00005010544	-	74	64.048	ENSPREG00000006864	raver1	61	64.048	Poecilia_reticulata
ENSEASG00005010544	-	84	95.285	ENSPPYG00000010514	RAVER1	56	95.285	Pongo_abelii
ENSEASG00005010544	-	90	92.500	ENSPCOG00000026605	RAVER1	64	96.030	Propithecus_coquereli
ENSEASG00005010544	-	88	96.509	ENSPVAG00000003689	RAVER1	65	96.509	Pteropus_vampyrus
ENSEASG00005010544	-	68	67.467	ENSPNYG00000013284	raver1	53	69.415	Pundamilia_nyererei
ENSEASG00005010544	-	73	64.891	ENSPNAG00000015476	raver1	56	64.891	Pygocentrus_nattereri
ENSEASG00005010544	-	93	87.699	ENSRNOG00000020710	Raver1	66	91.687	Rattus_norvegicus
ENSEASG00005010544	-	85	95.533	ENSRBIG00000034702	RAVER1	66	95.533	Rhinopithecus_bieti
ENSEASG00005010544	-	85	95.533	ENSRROG00000031186	RAVER1	66	95.533	Rhinopithecus_roxellana
ENSEASG00005010544	-	84	94.045	ENSSBOG00000023423	RAVER1	67	94.045	Saimiri_boliviensis_boliviensis
ENSEASG00005010544	-	75	86.826	ENSSHAG00000008181	-	58	86.826	Sarcophilus_harrisii
ENSEASG00005010544	-	69	66.667	ENSSMAG00000004546	raver1	51	67.287	Scophthalmus_maximus
ENSEASG00005010544	-	71	66.838	ENSSDUG00000021063	raver1	54	67.188	Seriola_dumerili
ENSEASG00005010544	-	72	66.244	ENSSLDG00000014505	raver1	53	66.838	Seriola_lalandi_dorsalis
ENSEASG00005010544	-	69	67.979	ENSSPAG00000000688	raver1	51	68.617	Stegastes_partitus
ENSEASG00005010544	-	93	92.791	ENSSSCG00000013650	-	68	96.774	Sus_scrofa
ENSEASG00005010544	-	72	64.838	ENSTRUG00000025641	raver1	55	64.838	Takifugu_rubripes
ENSEASG00005010544	-	93	92.111	ENSTTRG00000009552	RAVER1	66	96.030	Tursiops_truncatus
ENSEASG00005010544	-	88	96.526	ENSUAMG00000020385	RAVER1	64	96.526	Ursus_americanus
ENSEASG00005010544	-	88	95.533	ENSVVUG00000028976	RAVER1	66	95.533	Vulpes_vulpes
ENSEASG00005010544	-	90	66.118	ENSXETG00000011622	raver1	65	78.125	Xenopus_tropicalis
ENSEASG00005010544	-	72	65.909	ENSXCOG00000016368	raver1	53	65.909	Xiphophorus_couchianus
ENSEASG00005010544	-	72	65.909	ENSXMAG00000000217	raver1	53	65.995	Xiphophorus_maculatus