EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005010813 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 116578 bases
Position: chrPSZQ01004664.1:4093134-4209711
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005015502	PUF	PF00806.19	3.2e-71	1	8
ENSEASP00005015502	PUF	PF00806.19	3.2e-71	2	8
ENSEASP00005015502	PUF	PF00806.19	3.2e-71	3	8
ENSEASP00005015502	PUF	PF00806.19	3.2e-71	4	8
ENSEASP00005015502	PUF	PF00806.19	3.2e-71	5	8
ENSEASP00005015502	PUF	PF00806.19	3.2e-71	6	8
ENSEASP00005015502	PUF	PF00806.19	3.2e-71	7	8
ENSEASP00005015502	PUF	PF00806.19	3.2e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005016861	PUM1-201	3578	-	ENSEASP00005015502	1188 (aa)	-	UPI000719F02F

Gene Model

Click here to download ENSEASG00005010813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005010813's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005010813	PUM1	86	87.119	ENSEASG00005009429	PUM2	100	88.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005010813	PUM1	100	99.242	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSEASG00005010813	PUM1	90	91.084	ENSAPOG00000021632	pum1	100	77.220	Acanthochromis_polyacanthus
ENSEASG00005010813	PUM1	100	99.244	ENSAMEG00000017656	PUM1	97	99.244	Ailuropoda_melanoleuca
ENSEASG00005010813	PUM1	100	74.647	ENSACIG00000021013	pum1	100	76.573	Amphilophus_citrinellus
ENSEASG00005010813	PUM1	90	91.084	ENSAOCG00000003944	pum1	100	77.220	Amphiprion_ocellaris
ENSEASG00005010813	PUM1	90	91.084	ENSAPEG00000014550	pum1	100	77.220	Amphiprion_percula
ENSEASG00005010813	PUM1	90	91.084	ENSATEG00000016004	pum1	100	90.602	Anabas_testudineus
ENSEASG00005010813	PUM1	100	97.309	ENSAPLG00000009351	PUM1	100	97.309	Anas_platyrhynchos
ENSEASG00005010813	PUM1	100	95.623	ENSACAG00000000682	PUM1	98	95.539	Anolis_carolinensis
ENSEASG00005010813	PUM1	100	98.907	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSEASG00005010813	PUM1	90	76.645	ENSACLG00000019354	pum1	100	79.001	Astatotilapia_calliptera
ENSEASG00005010813	PUM1	100	78.595	ENSAMXG00000020607	pum1	96	79.097	Astyanax_mexicanus
ENSEASG00005010813	PUM1	100	99.158	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSEASG00005010813	PUM1	100	99.243	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSEASG00005010813	PUM1	100	97.056	ENSCAFG00000011205	PUM1	100	97.056	Canis_familiaris
ENSEASG00005010813	PUM1	92	97.179	ENSCAFG00020024616	PUM1	99	98.577	Canis_lupus_dingo
ENSEASG00005010813	PUM1	100	99.158	ENSCHIG00000012952	PUM1	100	99.158	Capra_hircus
ENSEASG00005010813	PUM1	100	98.823	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSEASG00005010813	PUM1	100	98.654	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSEASG00005010813	PUM1	100	96.970	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSEASG00005010813	PUM1	100	98.738	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSEASG00005010813	PUM1	100	98.250	ENSCSAG00000001028	PUM1	100	98.250	Chlorocebus_sabaeus
ENSEASG00005010813	PUM1	93	95.971	ENSCHOG00000010245	PUM1	93	95.971	Choloepus_hoffmanni
ENSEASG00005010813	PUM1	100	97.475	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSEASG00005010813	PUM1	100	99.242	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSEASG00005010813	PUM1	100	98.401	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSEASG00005010813	PUM1	100	98.401	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSEASG00005010813	PUM1	90	76.111	ENSCSEG00000015981	pum1	100	77.706	Cynoglossus_semilaevis
ENSEASG00005010813	PUM1	100	74.007	ENSCVAG00000007043	pum1	100	75.950	Cyprinodon_variegatus
ENSEASG00005010813	PUM1	100	79.264	ENSDARG00000099256	pum1	100	79.515	Danio_rerio
ENSEASG00005010813	PUM1	100	98.738	ENSDNOG00000010939	PUM1	100	98.738	Dasypus_novemcinctus
ENSEASG00005010813	PUM1	85	98.309	ENSDORG00000001875	Pum1	100	98.309	Dipodomys_ordii
ENSEASG00005010813	PUM1	88	93.555	ENSETEG00000004355	PUM1	87	93.555	Echinops_telfairi
ENSEASG00005010813	PUM1	100	99.832	ENSECAG00000021369	PUM1	100	99.832	Equus_caballus
ENSEASG00005010813	PUM1	76	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSEASG00005010813	PUM1	100	76.543	ENSELUG00000002409	pum1	100	83.787	Esox_lucius
ENSEASG00005010813	PUM1	100	99.327	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSEASG00005010813	PUM1	100	95.896	ENSFALG00000001214	PUM1	97	95.896	Ficedula_albicollis
ENSEASG00005010813	PUM1	100	98.654	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSEASG00005010813	PUM1	100	97.561	ENSGALG00000042598	PUM1	99	98.785	Gallus_gallus
ENSEASG00005010813	PUM1	90	87.356	ENSGAFG00000015617	pum1	100	81.263	Gambusia_affinis
ENSEASG00005010813	PUM1	100	74.752	ENSGACG00000005717	pum1	100	76.359	Gasterosteus_aculeatus
ENSEASG00005010813	PUM1	100	97.140	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSEASG00005010813	PUM1	100	99.242	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSEASG00005010813	PUM1	100	74.338	ENSHBUG00000018718	pum1	100	76.364	Haplochromis_burtoni
ENSEASG00005010813	PUM1	100	98.486	ENSHGLG00000013819	Pum1	100	98.611	Heterocephalus_glaber_female
ENSEASG00005010813	PUM1	100	98.486	ENSHGLG00100008621	Pum1	100	98.611	Heterocephalus_glaber_male
ENSEASG00005010813	PUM1	100	77.288	ENSIPUG00000020421	pum1	100	78.138	Ictalurus_punctatus
ENSEASG00005010813	PUM1	100	99.158	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSEASG00005010813	PUM1	100	98.737	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSEASG00005010813	PUM1	100	74.007	ENSKMAG00000003481	pum1	100	75.950	Kryptolebias_marmoratus
ENSEASG00005010813	PUM1	100	73.715	ENSLBEG00000002527	pum1	100	75.911	Labrus_bergylta
ENSEASG00005010813	PUM1	100	86.428	ENSLACG00000017188	PUM1	99	86.595	Latimeria_chalumnae
ENSEASG00005010813	PUM1	100	88.063	ENSLOCG00000005210	pum1	99	88.230	Lepisosteus_oculatus
ENSEASG00005010813	PUM1	100	98.654	ENSLAFG00000003178	PUM1	100	98.654	Loxodonta_africana
ENSEASG00005010813	PUM1	100	98.826	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSEASG00005010813	PUM1	100	98.826	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSEASG00005010813	PUM1	100	99.242	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSEASG00005010813	PUM1	100	99.242	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSEASG00005010813	PUM1	100	74.586	ENSMAMG00000011606	pum1	100	76.612	Mastacembelus_armatus
ENSEASG00005010813	PUM1	100	74.338	ENSMZEG00005005834	pum1	100	76.364	Maylandia_zebra
ENSEASG00005010813	PUM1	100	97.309	ENSMGAG00000000724	PUM1	100	97.309	Meleagris_gallopavo
ENSEASG00005010813	PUM1	100	98.570	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSEASG00005010813	PUM1	99	96.799	ENSMICG00000012213	-	99	96.799	Microcebus_murinus
ENSEASG00005010813	PUM1	100	98.991	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSEASG00005010813	PUM1	100	98.486	ENSMOCG00000015463	Pum1	100	98.611	Microtus_ochrogaster
ENSEASG00005010813	PUM1	90	87.816	ENSMMOG00000019817	pum1	100	90.361	Mola_mola
ENSEASG00005010813	PUM1	100	97.647	ENSMODG00000017067	PUM1	100	97.647	Monodelphis_domestica
ENSEASG00005010813	PUM1	90	88.046	ENSMALG00000016399	pum1	100	90.602	Monopterus_albus
ENSEASG00005010813	PUM1	100	98.316	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSEASG00005010813	PUM1	100	98.569	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSEASG00005010813	PUM1	100	98.401	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSEASG00005010813	PUM1	100	98.485	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSEASG00005010813	PUM1	100	99.074	ENSMPUG00000015454	PUM1	100	99.074	Mustela_putorius_furo
ENSEASG00005010813	PUM1	100	98.738	ENSMLUG00000006490	PUM1	100	98.738	Myotis_lucifugus
ENSEASG00005010813	PUM1	100	99.074	ENSNGAG00000002378	Pum1	100	99.074	Nannospalax_galili
ENSEASG00005010813	PUM1	80	81.312	ENSNBRG00000010689	pum1	100	83.580	Neolamprologus_brichardi
ENSEASG00005010813	PUM1	100	97.980	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSEASG00005010813	PUM1	76	100.000	ENSMEUG00000000976	-	75	97.297	Notamacropus_eugenii
ENSEASG00005010813	PUM1	84	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSEASG00005010813	PUM1	100	98.653	ENSODEG00000003465	PUM1	100	98.653	Octodon_degus
ENSEASG00005010813	PUM1	100	74.918	ENSONIG00000002290	pum1	100	76.694	Oreochromis_niloticus
ENSEASG00005010813	PUM1	81	77.324	ENSOANG00000004902	-	100	77.426	Ornithorhynchus_anatinus
ENSEASG00005010813	PUM1	100	98.738	ENSOCUG00000008641	PUM1	99	98.738	Oryctolagus_cuniculus
ENSEASG00005010813	PUM1	100	74.917	ENSORLG00000011482	pum1	100	76.194	Oryzias_latipes
ENSEASG00005010813	PUM1	100	75.000	ENSORLG00020019461	pum1	100	76.194	Oryzias_latipes_hni
ENSEASG00005010813	PUM1	100	75.000	ENSORLG00015011375	pum1	100	76.277	Oryzias_latipes_hsok
ENSEASG00005010813	PUM1	90	92.289	ENSOMEG00000009312	pum1	54	76.641	Oryzias_melastigma
ENSEASG00005010813	PUM1	100	96.138	ENSOGAG00000011063	PUM1	100	96.138	Otolemur_garnettii
ENSEASG00005010813	PUM1	100	98.318	ENSOARG00000001899	PUM1	100	99.034	Ovis_aries
ENSEASG00005010813	PUM1	100	99.242	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSEASG00005010813	PUM1	100	99.411	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSEASG00005010813	PUM1	100	99.242	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSEASG00005010813	PUM1	100	99.242	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSEASG00005010813	PUM1	100	99.242	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSEASG00005010813	PUM1	100	78.560	ENSPKIG00000010578	pum1	100	78.218	Paramormyrops_kingsleyae
ENSEASG00005010813	PUM1	100	97.727	ENSPSIG00000014118	PUM1	100	97.727	Pelodiscus_sinensis
ENSEASG00005010813	PUM1	80	79.657	ENSPMGG00000005836	pum1	100	82.029	Periophthalmus_magnuspinnatus
ENSEASG00005010813	PUM1	100	98.654	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSEASG00005010813	PUM1	100	97.731	ENSPCIG00000014151	PUM1	100	98.068	Phascolarctos_cinereus
ENSEASG00005010813	PUM1	95	77.408	ENSPFOG00000007289	pum1	99	82.569	Poecilia_formosa
ENSEASG00005010813	PUM1	100	73.451	ENSPLAG00000007256	pum1	100	78.342	Poecilia_latipinna
ENSEASG00005010813	PUM1	90	77.512	ENSPMEG00000019543	pum1	99	78.473	Poecilia_mexicana
ENSEASG00005010813	PUM1	100	74.421	ENSPREG00000005195	pum1	100	81.091	Poecilia_reticulata
ENSEASG00005010813	PUM1	100	97.277	ENSPPYG00000001621	PUM1	100	97.277	Pongo_abelii
ENSEASG00005010813	PUM1	77	99.691	ENSPCAG00000001979	PUM1	74	99.691	Procavia_capensis
ENSEASG00005010813	PUM1	100	98.991	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSEASG00005010813	PUM1	100	97.054	ENSPVAG00000005207	PUM1	97	97.054	Pteropus_vampyrus
ENSEASG00005010813	PUM1	100	74.421	ENSPNYG00000009518	pum1	100	81.205	Pundamilia_nyererei
ENSEASG00005010813	PUM1	100	79.097	ENSPNAG00000026728	pum1	100	80.480	Pygocentrus_nattereri
ENSEASG00005010813	PUM1	100	98.569	ENSRNOG00000011709	Pum1	100	98.569	Rattus_norvegicus
ENSEASG00005010813	PUM1	100	99.242	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSEASG00005010813	PUM1	100	99.242	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSEASG00005010813	PUM1	100	99.159	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSEASG00005010813	PUM1	100	97.563	ENSSHAG00000010918	PUM1	100	97.563	Sarcophilus_harrisii
ENSEASG00005010813	PUM1	90	88.046	ENSSMAG00000010918	pum1	100	90.602	Scophthalmus_maximus
ENSEASG00005010813	PUM1	100	74.421	ENSSDUG00000009021	pum1	100	76.694	Seriola_dumerili
ENSEASG00005010813	PUM1	95	76.012	ENSSLDG00000009667	pum1	100	78.756	Seriola_lalandi_dorsalis
ENSEASG00005010813	PUM1	94	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSEASG00005010813	PUM1	100	96.970	ENSSPUG00000006267	PUM1	100	96.970	Sphenodon_punctatus
ENSEASG00005010813	PUM1	90	91.084	ENSSPAG00000016636	pum1	100	77.220	Stegastes_partitus
ENSEASG00005010813	PUM1	100	99.411	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSEASG00005010813	PUM1	100	74.316	ENSTRUG00000013121	pum1	100	83.210	Takifugu_rubripes
ENSEASG00005010813	PUM1	100	74.813	ENSTNIG00000016983	pum1	99	76.846	Tetraodon_nigroviridis
ENSEASG00005010813	PUM1	87	95.122	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSEASG00005010813	PUM1	92	99.179	ENSTTRG00000007436	PUM1	90	99.179	Tursiops_truncatus
ENSEASG00005010813	PUM1	99	98.893	ENSUAMG00000018262	-	100	98.893	Ursus_americanus
ENSEASG00005010813	PUM1	95	99.517	ENSUMAG00000009211	PUM1	100	99.517	Ursus_maritimus
ENSEASG00005010813	PUM1	92	99.502	ENSVPAG00000005902	PUM1	92	99.502	Vicugna_pacos
ENSEASG00005010813	PUM1	100	99.327	ENSVVUG00000014631	PUM1	100	99.517	Vulpes_vulpes
ENSEASG00005010813	PUM1	100	87.238	ENSXETG00000012904	pum1	99	87.238	Xenopus_tropicalis
ENSEASG00005010813	PUM1	100	73.675	ENSXMAG00000002945	pum1	100	78.031	Xiphophorus_maculatus