EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005011400 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 170981 bases
Position: chrPSZQ01001362.1:3459364-3630344
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005016460	RNA_bind	PF08675.11	1.9e-33	1	1
ENSEASP00005016456	RNA_bind	PF08675.11	2e-33	1	1
ENSEASP00005016460	CAF1	PF04857.20	1.3e-88	1	1
ENSEASP00005016456	CAF1	PF04857.20	1.4e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005017878	PARN-201	1971	-	ENSEASP00005016456	656 (aa)	-	-
ENSEAST00005017882	PARN-202	2031	-	ENSEASP00005016460	637 (aa)	-	-

Gene Model

Click here to download ENSEASG00005011400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005011400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005011400	PARN	100	92.801	ENSG00000140694	PARN	100	98.305	Homo_sapiens
ENSEASG00005011400	PARN	100	93.740	ENSAMEG00000011208	PARN	100	93.740	Ailuropoda_melanoleuca
ENSEASG00005011400	PARN	83	75.746	ENSACIG00000000619	parn	83	75.746	Amphilophus_citrinellus
ENSEASG00005011400	PARN	100	64.731	ENSAOCG00000003465	parn	83	73.196	Amphiprion_ocellaris
ENSEASG00005011400	PARN	74	78.013	ENSAPEG00000010661	parn	91	78.013	Amphiprion_percula
ENSEASG00005011400	PARN	99	68.453	ENSATEG00000004661	parn	88	70.692	Anabas_testudineus
ENSEASG00005011400	PARN	99	83.254	ENSAPLG00000013914	PARN	99	83.254	Anas_platyrhynchos
ENSEASG00005011400	PARN	100	77.385	ENSACAG00000004973	PARN	100	77.385	Anolis_carolinensis
ENSEASG00005011400	PARN	100	92.332	ENSANAG00000031516	PARN	100	98.305	Aotus_nancymaae
ENSEASG00005011400	PARN	100	65.243	ENSACLG00000004742	parn	100	64.861	Astatotilapia_calliptera
ENSEASG00005011400	PARN	90	72.000	ENSAMXG00000012390	parn	92	72.000	Astyanax_mexicanus
ENSEASG00005011400	PARN	100	92.006	ENSBTAG00000018097	PARN	100	94.454	Bos_taurus
ENSEASG00005011400	PARN	100	92.958	ENSCJAG00000015866	PARN	100	98.305	Callithrix_jacchus
ENSEASG00005011400	PARN	100	94.044	ENSCAFG00000018795	PARN	100	94.044	Canis_familiaris
ENSEASG00005011400	PARN	100	94.044	ENSCAFG00020024126	PARN	100	94.044	Canis_lupus_dingo
ENSEASG00005011400	PARN	100	95.298	ENSCHIG00000018143	PARN	100	95.298	Capra_hircus
ENSEASG00005011400	PARN	73	62.162	ENSCAPG00000007984	PARN	78	62.162	Cavia_aperea
ENSEASG00005011400	PARN	100	89.028	ENSCPOG00000002263	PARN	100	89.028	Cavia_porcellus
ENSEASG00005011400	PARN	100	92.801	ENSCCAG00000030367	PARN	100	98.305	Cebus_capucinus
ENSEASG00005011400	PARN	90	96.755	ENSCATG00000041368	PARN	100	98.305	Cercocebus_atys
ENSEASG00005011400	PARN	53	36.111	ENSCATG00000033196	PNLDC1	71	36.111	Cercocebus_atys
ENSEASG00005011400	PARN	100	89.655	ENSCLAG00000015406	PARN	99	89.655	Chinchilla_lanigera
ENSEASG00005011400	PARN	100	93.427	ENSCSAG00000008142	PARN	100	93.427	Chlorocebus_sabaeus
ENSEASG00005011400	PARN	99	77.021	ENSCHOG00000007014	PARN	100	77.021	Choloepus_hoffmanni
ENSEASG00005011400	PARN	88	84.135	ENSCPBG00000006609	PARN	97	84.358	Chrysemys_picta_bellii
ENSEASG00005011400	PARN	80	43.902	ENSCING00000010142	-	99	43.902	Ciona_intestinalis
ENSEASG00005011400	PARN	100	81.651	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSEASG00005011400	PARN	100	85.491	ENSCGRG00001012096	Parn	100	85.491	Cricetulus_griseus_chok1gshd
ENSEASG00005011400	PARN	100	85.491	ENSCGRG00000004939	Parn	100	85.491	Cricetulus_griseus_crigri
ENSEASG00005011400	PARN	100	63.584	ENSCSEG00000002064	parn	100	64.253	Cynoglossus_semilaevis
ENSEASG00005011400	PARN	91	72.867	ENSCVAG00000014848	parn	83	72.867	Cyprinodon_variegatus
ENSEASG00005011400	PARN	100	64.545	ENSDARG00000102634	parn	92	68.317	Danio_rerio
ENSEASG00005011400	PARN	100	93.260	ENSDNOG00000000833	PARN	98	95.683	Dasypus_novemcinctus
ENSEASG00005011400	PARN	74	93.916	ENSETEG00000014828	-	78	93.916	Echinops_telfairi
ENSEASG00005011400	PARN	100	99.529	ENSECAG00000017792	PARN	100	99.529	Equus_caballus
ENSEASG00005011400	PARN	86	84.163	ENSEEUG00000010370	PARN	86	84.163	Erinaceus_europaeus
ENSEASG00005011400	PARN	90	72.727	ENSELUG00000013139	parn	75	72.727	Esox_lucius
ENSEASG00005011400	PARN	100	94.828	ENSFCAG00000044961	PARN	100	98.305	Felis_catus
ENSEASG00005011400	PARN	58	31.053	ENSFALG00000012081	PNLDC1	70	31.053	Ficedula_albicollis
ENSEASG00005011400	PARN	99	82.567	ENSFALG00000003911	PARN	98	82.567	Ficedula_albicollis
ENSEASG00005011400	PARN	100	89.342	ENSFDAG00000009234	PARN	100	89.342	Fukomys_damarensis
ENSEASG00005011400	PARN	91	65.997	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSEASG00005011400	PARN	83	76.119	ENSGMOG00000003231	parn	97	76.119	Gadus_morhua
ENSEASG00005011400	PARN	100	81.661	ENSGALG00000003091	PARN	100	81.661	Gallus_gallus
ENSEASG00005011400	PARN	90	73.070	ENSGAFG00000011061	parn	84	72.589	Gambusia_affinis
ENSEASG00005011400	PARN	100	68.429	ENSGACG00000019501	parn	100	68.896	Gasterosteus_aculeatus
ENSEASG00005011400	PARN	51	78.834	ENSGAGG00000023281	PARN	83	78.834	Gopherus_agassizii
ENSEASG00005011400	PARN	97	93.076	ENSGGOG00000025224	PARN	100	98.305	Gorilla_gorilla
ENSEASG00005011400	PARN	92	72.148	ENSHBUG00000017906	parn	90	76.164	Haplochromis_burtoni
ENSEASG00005011400	PARN	100	89.185	ENSHGLG00000010886	PARN	100	89.185	Heterocephalus_glaber_female
ENSEASG00005011400	PARN	100	89.185	ENSHGLG00100014659	PARN	100	89.185	Heterocephalus_glaber_male
ENSEASG00005011400	PARN	82	72.968	ENSHCOG00000008683	parn	91	72.968	Hippocampus_comes
ENSEASG00005011400	PARN	90	63.351	ENSIPUG00000012401	parn	84	63.351	Ictalurus_punctatus
ENSEASG00005011400	PARN	100	91.536	ENSSTOG00000007519	PARN	100	91.536	Ictidomys_tridecemlineatus
ENSEASG00005011400	PARN	100	88.715	ENSJJAG00000023049	Parn	100	88.715	Jaculus_jaculus
ENSEASG00005011400	PARN	91	72.945	ENSKMAG00000009462	parn	83	72.945	Kryptolebias_marmoratus
ENSEASG00005011400	PARN	90	72.337	ENSLBEG00000009167	parn	89	72.337	Labrus_bergylta
ENSEASG00005011400	PARN	79	78.373	ENSLACG00000004207	PARN	100	76.651	Latimeria_chalumnae
ENSEASG00005011400	PARN	90	75.910	ENSLOCG00000000715	parn	83	75.910	Lepisosteus_oculatus
ENSEASG00005011400	PARN	100	92.633	ENSLAFG00000015036	PARN	100	92.633	Loxodonta_africana
ENSEASG00005011400	PARN	100	88.438	ENSMFAG00000044852	PARN	100	98.305	Macaca_fascicularis
ENSEASG00005011400	PARN	100	93.114	ENSMMUG00000018849	PARN	100	98.305	Macaca_mulatta
ENSEASG00005011400	PARN	100	93.271	ENSMNEG00000045108	PARN	100	98.305	Macaca_nemestrina
ENSEASG00005011400	PARN	100	93.114	ENSMLEG00000031743	PARN	100	98.305	Mandrillus_leucophaeus
ENSEASG00005011400	PARN	99	67.226	ENSMAMG00000006939	parn	84	71.262	Mastacembelus_armatus
ENSEASG00005011400	PARN	92	72.148	ENSMZEG00005013590	parn	90	75.933	Maylandia_zebra
ENSEASG00005011400	PARN	95	82.072	ENSMGAG00000001004	PARN	95	82.072	Meleagris_gallopavo
ENSEASG00005011400	PARN	100	79.969	ENSMAUG00000008025	Parn	100	79.969	Mesocricetus_auratus
ENSEASG00005011400	PARN	100	93.574	ENSMICG00000016053	PARN	100	100.000	Microcebus_murinus
ENSEASG00005011400	PARN	78	91.093	ENSMOCG00000022211	Parn	100	91.093	Microtus_ochrogaster
ENSEASG00005011400	PARN	100	65.839	ENSMMOG00000011333	parn	87	75.514	Mola_mola
ENSEASG00005011400	PARN	78	93.952	ENSMODG00000004915	PARN	99	93.952	Monodelphis_domestica
ENSEASG00005011400	PARN	83	78.212	ENSMALG00000019426	parn	91	78.212	Monopterus_albus
ENSEASG00005011400	PARN	100	86.834	MGP_CAROLIEiJ_G0020466	Parn	100	86.834	Mus_caroli
ENSEASG00005011400	PARN	100	86.207	ENSMUSG00000022685	Parn	100	95.122	Mus_musculus
ENSEASG00005011400	PARN	100	86.520	MGP_PahariEiJ_G0016172	Parn	100	86.520	Mus_pahari
ENSEASG00005011400	PARN	100	86.677	MGP_SPRETEiJ_G0021361	Parn	100	86.677	Mus_spretus
ENSEASG00005011400	PARN	100	94.828	ENSMPUG00000014464	PARN	100	94.828	Mustela_putorius_furo
ENSEASG00005011400	PARN	77	94.939	ENSMLUG00000005414	PARN	100	94.939	Myotis_lucifugus
ENSEASG00005011400	PARN	83	75.655	ENSNBRG00000006805	parn	90	75.655	Neolamprologus_brichardi
ENSEASG00005011400	PARN	100	92.801	ENSNLEG00000010241	PARN	100	98.305	Nomascus_leucogenys
ENSEASG00005011400	PARN	99	61.965	ENSMEUG00000008178	-	100	61.965	Notamacropus_eugenii
ENSEASG00005011400	PARN	99	86.371	ENSOPRG00000012187	PARN	100	86.371	Ochotona_princeps
ENSEASG00005011400	PARN	100	81.123	ENSODEG00000001617	PARN	100	81.123	Octodon_degus
ENSEASG00005011400	PARN	100	68.645	ENSONIG00000000151	parn	100	68.645	Oreochromis_niloticus
ENSEASG00005011400	PARN	59	83.421	ENSOANG00000020155	-	97	83.684	Ornithorhynchus_anatinus
ENSEASG00005011400	PARN	99	90.236	ENSOCUG00000000322	PARN	100	90.236	Oryctolagus_cuniculus
ENSEASG00005011400	PARN	91	72.603	ENSORLG00020010313	parn	88	70.164	Oryzias_latipes_hni
ENSEASG00005011400	PARN	91	72.774	ENSORLG00015000300	parn	88	70.328	Oryzias_latipes_hsok
ENSEASG00005011400	PARN	99	66.667	ENSOMEG00000019555	parn	97	66.063	Oryzias_melastigma
ENSEASG00005011400	PARN	77	92.727	ENSOGAG00000014626	PARN	100	92.727	Otolemur_garnettii
ENSEASG00005011400	PARN	77	97.571	ENSOARG00000007574	PARN	100	97.571	Ovis_aries
ENSEASG00005011400	PARN	100	92.488	ENSPPAG00000031438	PARN	100	98.305	Pan_paniscus
ENSEASG00005011400	PARN	100	94.671	ENSPPRG00000018583	PARN	100	98.305	Panthera_pardus
ENSEASG00005011400	PARN	100	94.671	ENSPTIG00000012135	PARN	100	98.305	Panthera_tigris_altaica
ENSEASG00005011400	PARN	100	92.488	ENSPTRG00000007792	PARN	100	98.305	Pan_troglodytes
ENSEASG00005011400	PARN	100	90.141	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSEASG00005011400	PARN	91	74.221	ENSPKIG00000022807	parn	84	73.333	Paramormyrops_kingsleyae
ENSEASG00005011400	PARN	99	82.884	ENSPSIG00000014804	PARN	100	82.669	Pelodiscus_sinensis
ENSEASG00005011400	PARN	86	72.744	ENSPMGG00000014431	parn	77	73.237	Periophthalmus_magnuspinnatus
ENSEASG00005011400	PARN	100	83.542	ENSPEMG00000018439	Parn	100	83.542	Peromyscus_maniculatus_bairdii
ENSEASG00005011400	PARN	82	66.603	ENSPMAG00000003956	parn	99	66.857	Petromyzon_marinus
ENSEASG00005011400	PARN	66	86.288	ENSPCIG00000001259	PARN	91	93.220	Phascolarctos_cinereus
ENSEASG00005011400	PARN	90	72.978	ENSPFOG00000012823	parn	83	72.899	Poecilia_formosa
ENSEASG00005011400	PARN	90	73.150	ENSPLAG00000006395	parn	83	73.070	Poecilia_latipinna
ENSEASG00005011400	PARN	90	73.150	ENSPMEG00000007711	parn	83	73.070	Poecilia_mexicana
ENSEASG00005011400	PARN	90	72.806	ENSPREG00000000147	parn	83	72.727	Poecilia_reticulata
ENSEASG00005011400	PARN	100	92.200	ENSPPYG00000007123	PARN	100	92.200	Pongo_abelii
ENSEASG00005011400	PARN	95	82.479	ENSPCAG00000001741	PARN	100	82.479	Procavia_capensis
ENSEASG00005011400	PARN	100	91.066	ENSPCOG00000019292	PARN	100	100.000	Propithecus_coquereli
ENSEASG00005011400	PARN	99	90.967	ENSPVAG00000002547	PARN	100	90.967	Pteropus_vampyrus
ENSEASG00005011400	PARN	97	69.111	ENSPNYG00000006835	parn	90	73.184	Pundamilia_nyererei
ENSEASG00005011400	PARN	83	74.194	ENSPNAG00000018905	parn	84	74.194	Pygocentrus_nattereri
ENSEASG00005011400	PARN	100	84.299	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSEASG00005011400	PARN	52	89.790	ENSRBIG00000018726	PARN	100	89.790	Rhinopithecus_bieti
ENSEASG00005011400	PARN	52	89.790	ENSRROG00000011162	-	100	89.790	Rhinopithecus_roxellana
ENSEASG00005011400	PARN	100	91.236	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSEASG00005011400	PARN	66	93.062	ENSSHAG00000008493	PARN	94	93.062	Sarcophilus_harrisii
ENSEASG00005011400	PARN	96	72.876	ENSSFOG00015014165	parn	92	73.913	Scleropages_formosus
ENSEASG00005011400	PARN	100	62.404	ENSSMAG00000000685	parn	100	62.250	Scophthalmus_maximus
ENSEASG00005011400	PARN	90	72.603	ENSSDUG00000014555	parn	83	72.945	Seriola_dumerili
ENSEASG00005011400	PARN	81	94.931	ENSSARG00000014339	PARN	89	94.931	Sorex_araneus
ENSEASG00005011400	PARN	100	84.013	ENSSPUG00000007719	PARN	100	84.013	Sphenodon_punctatus
ENSEASG00005011400	PARN	100	65.985	ENSSPAG00000007095	parn	100	65.985	Stegastes_partitus
ENSEASG00005011400	PARN	100	94.044	ENSSSCG00000007878	PARN	89	94.044	Sus_scrofa
ENSEASG00005011400	PARN	99	82.205	ENSTGUG00000004971	PARN	99	82.464	Taeniopygia_guttata
ENSEASG00005011400	PARN	55	30.556	ENSTGUG00000011418	PNLDC1	68	30.556	Taeniopygia_guttata
ENSEASG00005011400	PARN	100	68.266	ENSTNIG00000008252	parn	100	68.266	Tetraodon_nigroviridis
ENSEASG00005011400	PARN	91	79.102	ENSTBEG00000010407	PARN	100	79.102	Tupaia_belangeri
ENSEASG00005011400	PARN	99	90.016	ENSTTRG00000002843	PARN	100	90.016	Tursiops_truncatus
ENSEASG00005011400	PARN	73	78.801	ENSUAMG00000008283	PARN	96	78.801	Ursus_americanus
ENSEASG00005011400	PARN	100	93.730	ENSUMAG00000004527	PARN	100	93.730	Ursus_maritimus
ENSEASG00005011400	PARN	96	91.042	ENSVPAG00000008968	PARN	100	91.042	Vicugna_pacos
ENSEASG00005011400	PARN	100	94.357	ENSVVUG00000019509	PARN	100	94.357	Vulpes_vulpes
ENSEASG00005011400	PARN	100	74.375	ENSXETG00000010994	parn	100	82.510	Xenopus_tropicalis
ENSEASG00005011400	PARN	90	69.655	ENSXCOG00000015990	parn	96	69.218	Xiphophorus_couchianus
ENSEASG00005011400	PARN	91	72.804	ENSXMAG00000014783	parn	84	72.804	Xiphophorus_maculatus