EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005011599 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 363275 bases
Position: chrPSZQ01001362.1:8981239-9344513
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005016748	Fox-1_C	PF12414.8	1.5e-42	1	1
ENSEASP00005016753	Fox-1_C	PF12414.8	1.4e-40	1	1
ENSEASP00005016742	Fox-1_C	PF12414.8	1.4e-40	1	1
ENSEASP00005016750	Fox-1_C	PF12414.8	1.5e-40	1	1
ENSEASP00005016745	Fox-1_C	PF12414.8	1.6e-40	1	1
ENSEASP00005016760	Fox-1_C	PF12414.8	2.6e-40	1	1
ENSEASP00005016757	Fox-1_C	PF12414.8	2.6e-38	1	1
ENSEASP00005016757	RRM_1	PF00076.22	3.1e-18	1	1
ENSEASP00005016753	RRM_1	PF00076.22	3.3e-18	1	1
ENSEASP00005016742	RRM_1	PF00076.22	3.5e-18	1	1
ENSEASP00005016750	RRM_1	PF00076.22	3.6e-18	1	1
ENSEASP00005016745	RRM_1	PF00076.22	3.9e-18	1	1
ENSEASP00005016760	RRM_1	PF00076.22	4.2e-18	1	1
ENSEASP00005016748	RRM_1	PF00076.22	4.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005018213	RBFOX1-207	1284	-	ENSEASP00005016760	427 (aa)	-	-
ENSEAST00005018200	RBFOX1-203	1441	-	ENSEASP00005016748	436 (aa)	-	-
ENSEAST00005018203	RBFOX1-204	1390	-	ENSEASP00005016750	419 (aa)	-	-
ENSEAST00005018206	RBFOX1-205	1203	-	ENSEASP00005016753	400 (aa)	-	-
ENSEAST00005018210	RBFOX1-206	1188	-	ENSEASP00005016757	395 (aa)	-	UPI0002C63710
ENSEAST00005018194	RBFOX1-201	1248	-	ENSEASP00005016742	415 (aa)	-	-
ENSEAST00005018197	RBFOX1-202	1444	-	ENSEASP00005016745	437 (aa)	-	-

Gene Model

Click here to download ENSEASG00005011599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005011599's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005011599	RBFOX1	98	62.469	ENSEASG00005018920	RBFOX2	83	63.119
ENSEASG00005011599	RBFOX1	81	67.073	ENSEASG00005005059	RBFOX3	100	70.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005011599	RBFOX1	100	98.987	ENSG00000078328	RBFOX1	100	98.987	Homo_sapiens
ENSEASG00005011599	RBFOX1	100	74.402	ENSAPOG00000003197	rbfox1	100	77.045	Acanthochromis_polyacanthus
ENSEASG00005011599	RBFOX1	63	96.800	ENSAMEG00000008605	RBFOX1	100	96.800	Ailuropoda_melanoleuca
ENSEASG00005011599	RBFOX1	67	62.626	ENSACIG00000005478	rbfox1	68	64.865	Amphilophus_citrinellus
ENSEASG00005011599	RBFOX1	75	70.662	ENSAOCG00000008283	rbfox1	99	70.347	Amphiprion_ocellaris
ENSEASG00005011599	RBFOX1	95	71.504	ENSAPEG00000010636	rbfox1	100	71.579	Amphiprion_percula
ENSEASG00005011599	RBFOX1	77	68.210	ENSATEG00000007513	rbfox1	100	71.914	Anabas_testudineus
ENSEASG00005011599	RBFOX1	98	92.602	ENSAPLG00000013263	RBFOX1	98	94.656	Anas_platyrhynchos
ENSEASG00005011599	RBFOX1	99	85.390	ENSACAG00000004013	RBFOX1	98	88.010	Anolis_carolinensis
ENSEASG00005011599	RBFOX1	100	99.250	ENSANAG00000029527	RBFOX1	100	99.250	Aotus_nancymaae
ENSEASG00005011599	RBFOX1	58	87.059	ENSAMXG00000002431	rbfox1	81	79.859	Astyanax_mexicanus
ENSEASG00005011599	RBFOX1	100	99.250	ENSBTAG00000007210	RBFOX1	100	99.250	Bos_taurus
ENSEASG00005011599	RBFOX1	98	99.231	ENSCJAG00000017351	RBFOX1	97	98.765	Callithrix_jacchus
ENSEASG00005011599	RBFOX1	100	99.747	ENSCAFG00000019082	RBFOX1	100	99.747	Canis_familiaris
ENSEASG00005011599	RBFOX1	100	86.076	ENSCAFG00020024881	RBFOX1	99	86.329	Canis_lupus_dingo
ENSEASG00005011599	RBFOX1	100	99.494	ENSCHIG00000023549	RBFOX1	100	99.494	Capra_hircus
ENSEASG00005011599	RBFOX1	97	98.972	ENSTSYG00000005334	RBFOX1	100	98.972	Carlito_syrichta
ENSEASG00005011599	RBFOX1	98	98.974	ENSCAPG00000017669	RBFOX1	100	98.969	Cavia_aperea
ENSEASG00005011599	RBFOX1	98	98.974	ENSCPOG00000011314	RBFOX1	99	98.715	Cavia_porcellus
ENSEASG00005011599	RBFOX1	98	99.231	ENSCCAG00000023031	RBFOX1	97	98.765	Cebus_capucinus
ENSEASG00005011599	RBFOX1	100	98.987	ENSCATG00000033816	RBFOX1	97	98.765	Cercocebus_atys
ENSEASG00005011599	RBFOX1	98	98.974	ENSCLAG00000012761	RBFOX1	98	98.715	Chinchilla_lanigera
ENSEASG00005011599	RBFOX1	93	97.275	ENSCSAG00000008739	RBFOX1	97	97.275	Chlorocebus_sabaeus
ENSEASG00005011599	RBFOX1	98	76.543	ENSCHOG00000012843	RBFOX1	97	76.543	Choloepus_hoffmanni
ENSEASG00005011599	RBFOX1	100	94.500	ENSCPBG00000026626	RBFOX1	100	94.500	Chrysemys_picta_bellii
ENSEASG00005011599	RBFOX1	98	99.231	ENSCANG00000033125	RBFOX1	97	98.765	Colobus_angolensis_palliatus
ENSEASG00005011599	RBFOX1	98	97.704	ENSCGRG00001013729	Rbfox1	98	97.943	Cricetulus_griseus_chok1gshd
ENSEASG00005011599	RBFOX1	98	97.704	ENSCGRG00000003272	Rbfox1	98	97.943	Cricetulus_griseus_crigri
ENSEASG00005011599	RBFOX1	95	69.598	ENSCSEG00000008840	rbfox1	100	71.537	Cynoglossus_semilaevis
ENSEASG00005011599	RBFOX1	100	79.551	ENSDARG00000014746	rbfox1	100	86.829	Danio_rerio
ENSEASG00005011599	RBFOX1	98	97.179	ENSDNOG00000043612	RBFOX1	98	96.543	Dasypus_novemcinctus
ENSEASG00005011599	RBFOX1	98	94.148	ENSDORG00000010024	Rbfox1	100	93.564	Dipodomys_ordii
ENSEASG00005011599	RBFOX1	98	78.272	ENSETEG00000003771	RBFOX1	97	78.272	Echinops_telfairi
ENSEASG00005011599	RBFOX1	100	99.759	ENSECAG00000012667	RBFOX1	100	99.759	Equus_caballus
ENSEASG00005011599	RBFOX1	82	69.767	ENSELUG00000013096	rbfox1	97	69.767	Esox_lucius
ENSEASG00005011599	RBFOX1	100	99.494	ENSFCAG00000025322	RBFOX1	100	98.853	Felis_catus
ENSEASG00005011599	RBFOX1	82	92.593	ENSFALG00000004027	RBFOX1	100	92.814	Ficedula_albicollis
ENSEASG00005011599	RBFOX1	98	99.487	ENSFDAG00000007388	RBFOX1	98	99.229	Fukomys_damarensis
ENSEASG00005011599	RBFOX1	98	94.359	ENSGALG00000034325	RBFOX1	100	92.368	Gallus_gallus
ENSEASG00005011599	RBFOX1	100	92.911	ENSGAGG00000023681	RBFOX1	100	95.225	Gopherus_agassizii
ENSEASG00005011599	RBFOX1	98	99.231	ENSGGOG00000016871	-	97	98.765	Gorilla_gorilla
ENSEASG00005011599	RBFOX1	98	99.231	ENSHGLG00000016944	RBFOX1	98	98.972	Heterocephalus_glaber_female
ENSEASG00005011599	RBFOX1	98	99.231	ENSHGLG00100003272	RBFOX1	98	98.972	Heterocephalus_glaber_male
ENSEASG00005011599	RBFOX1	85	70.977	ENSHCOG00000016419	rbfox1	91	72.121	Hippocampus_comes
ENSEASG00005011599	RBFOX1	95	81.481	ENSIPUG00000015215	rbfox1	100	83.554	Ictalurus_punctatus
ENSEASG00005011599	RBFOX1	98	98.718	ENSSTOG00000000322	RBFOX1	98	98.458	Ictidomys_tridecemlineatus
ENSEASG00005011599	RBFOX1	98	95.128	ENSJJAG00000002575	Rbfox1	98	94.859	Jaculus_jaculus
ENSEASG00005011599	RBFOX1	97	73.300	ENSLBEG00000014659	rbfox1	98	73.048	Labrus_bergylta
ENSEASG00005011599	RBFOX1	98	84.987	ENSLOCG00000006675	rbfox1	100	85.930	Lepisosteus_oculatus
ENSEASG00005011599	RBFOX1	77	99.675	ENSLAFG00000011480	RBFOX1	100	99.675	Loxodonta_africana
ENSEASG00005011599	RBFOX1	98	98.974	ENSMFAG00000036447	RBFOX1	97	98.519	Macaca_fascicularis
ENSEASG00005011599	RBFOX1	98	98.974	ENSMMUG00000003458	RBFOX1	99	97.003	Macaca_mulatta
ENSEASG00005011599	RBFOX1	98	98.974	ENSMNEG00000032034	RBFOX1	97	98.519	Macaca_nemestrina
ENSEASG00005011599	RBFOX1	98	99.231	ENSMLEG00000015382	RBFOX1	97	98.765	Mandrillus_leucophaeus
ENSEASG00005011599	RBFOX1	95	73.282	ENSMAMG00000003142	rbfox1	100	75.765	Mastacembelus_armatus
ENSEASG00005011599	RBFOX1	73	89.347	ENSMGAG00000008606	RBFOX1	98	89.161	Meleagris_gallopavo
ENSEASG00005011599	RBFOX1	96	56.623	ENSMAUG00000020570	Rbfox1	96	57.031	Mesocricetus_auratus
ENSEASG00005011599	RBFOX1	100	98.734	ENSMICG00000034286	RBFOX1	100	98.734	Microcebus_murinus
ENSEASG00005011599	RBFOX1	98	97.704	ENSMOCG00000020932	Rbfox1	100	98.177	Microtus_ochrogaster
ENSEASG00005011599	RBFOX1	86	71.098	ENSMMOG00000009716	rbfox1	86	72.360	Mola_mola
ENSEASG00005011599	RBFOX1	90	95.493	ENSMODG00000005826	RBFOX1	100	95.493	Monodelphis_domestica
ENSEASG00005011599	RBFOX1	98	76.082	ENSMALG00000003337	rbfox1	100	74.757	Monopterus_albus
ENSEASG00005011599	RBFOX1	98	97.959	MGP_CAROLIEiJ_G0020427	Rbfox1	98	98.201	Mus_caroli
ENSEASG00005011599	RBFOX1	98	97.704	ENSMUSG00000008658	Rbfox1	100	100.000	Mus_musculus
ENSEASG00005011599	RBFOX1	98	97.959	MGP_PahariEiJ_G0016135	Rbfox1	98	98.201	Mus_pahari
ENSEASG00005011599	RBFOX1	98	97.449	MGP_SPRETEiJ_G0021321	Rbfox1	98	97.686	Mus_spretus
ENSEASG00005011599	RBFOX1	100	97.215	ENSMPUG00000014822	RBFOX1	100	97.215	Mustela_putorius_furo
ENSEASG00005011599	RBFOX1	77	97.403	ENSMLUG00000015896	RBFOX1	100	100.000	Myotis_lucifugus
ENSEASG00005011599	RBFOX1	98	98.469	ENSNGAG00000023276	Rbfox1	100	98.969	Nannospalax_galili
ENSEASG00005011599	RBFOX1	98	60.628	ENSNBRG00000011084	rbfox1	95	62.129	Neolamprologus_brichardi
ENSEASG00005011599	RBFOX1	98	98.974	ENSNLEG00000010017	-	97	98.519	Nomascus_leucogenys
ENSEASG00005011599	RBFOX1	98	80.741	ENSMEUG00000012525	RBFOX1	97	80.741	Notamacropus_eugenii
ENSEASG00005011599	RBFOX1	98	79.753	ENSOPRG00000006199	-	97	79.753	Ochotona_princeps
ENSEASG00005011599	RBFOX1	98	98.205	ENSODEG00000013166	RBFOX1	98	97.943	Octodon_degus
ENSEASG00005011599	RBFOX1	93	94.550	ENSOANG00000002379	RBFOX1	97	94.550	Ornithorhynchus_anatinus
ENSEASG00005011599	RBFOX1	55	97.248	ENSOCUG00000001205	-	97	97.248	Oryctolagus_cuniculus
ENSEASG00005011599	RBFOX1	99	96.193	ENSOGAG00000025535	RBFOX1	98	98.972	Otolemur_garnettii
ENSEASG00005011599	RBFOX1	64	85.657	ENSOARG00000005135	RBFOX1	100	85.657	Ovis_aries
ENSEASG00005011599	RBFOX1	97	97.172	ENSPPAG00000036238	-	100	99.454	Pan_paniscus
ENSEASG00005011599	RBFOX1	98	99.259	ENSPPRG00000006546	RBFOX1	97	99.259	Panthera_pardus
ENSEASG00005011599	RBFOX1	98	85.242	ENSPTIG00000021154	RBFOX1	100	86.224	Panthera_tigris_altaica
ENSEASG00005011599	RBFOX1	98	99.231	ENSPTRG00000007744	RBFOX1	97	98.765	Pan_troglodytes
ENSEASG00005011599	RBFOX1	98	99.231	ENSPANG00000026500	RBFOX1	97	98.765	Papio_anubis
ENSEASG00005011599	RBFOX1	75	83.721	ENSPKIG00000019353	rbfox1	89	85.246	Paramormyrops_kingsleyae
ENSEASG00005011599	RBFOX1	98	80.612	ENSPKIG00000009667	-	99	80.270	Paramormyrops_kingsleyae
ENSEASG00005011599	RBFOX1	100	93.000	ENSPSIG00000006523	RBFOX1	100	93.000	Pelodiscus_sinensis
ENSEASG00005011599	RBFOX1	98	97.959	ENSPEMG00000017607	Rbfox1	98	98.201	Peromyscus_maniculatus_bairdii
ENSEASG00005011599	RBFOX1	73	92.123	ENSPCIG00000026887	RBFOX1	100	93.103	Phascolarctos_cinereus
ENSEASG00005011599	RBFOX1	100	96.962	ENSPPYG00000007079	-	100	96.962	Pongo_abelii
ENSEASG00005011599	RBFOX1	91	89.947	ENSPCAG00000002630	RBFOX1	100	89.947	Procavia_capensis
ENSEASG00005011599	RBFOX1	98	99.231	ENSPCOG00000025687	RBFOX1	97	98.765	Propithecus_coquereli
ENSEASG00005011599	RBFOX1	98	95.128	ENSPVAG00000013467	RBFOX1	97	95.062	Pteropus_vampyrus
ENSEASG00005011599	RBFOX1	95	79.093	ENSPNAG00000023109	rbfox1	100	81.061	Pygocentrus_nattereri
ENSEASG00005011599	RBFOX1	98	95.663	ENSRNOG00000002827	Rbfox1	97	97.820	Rattus_norvegicus
ENSEASG00005011599	RBFOX1	97	97.172	ENSRBIG00000044478	RBFOX1	100	99.227	Rhinopithecus_bieti
ENSEASG00005011599	RBFOX1	100	98.987	ENSRROG00000044411	RBFOX1	100	98.987	Rhinopithecus_roxellana
ENSEASG00005011599	RBFOX1	100	99.241	ENSSBOG00000033726	RBFOX1	100	99.241	Saimiri_boliviensis_boliviensis
ENSEASG00005011599	RBFOX1	97	92.031	ENSSHAG00000009257	RBFOX1	98	94.072	Sarcophilus_harrisii
ENSEASG00005011599	RBFOX1	88	70.360	ENSSFOG00015009955	-	89	68.044	Scleropages_formosus
ENSEASG00005011599	RBFOX1	100	67.574	ENSSFOG00015023675	rbfox1	100	87.778	Scleropages_formosus
ENSEASG00005011599	RBFOX1	97	77.677	ENSSMAG00000015505	rbfox1	100	77.449	Scophthalmus_maximus
ENSEASG00005011599	RBFOX1	98	74.177	ENSSDUG00000016413	rbfox1	100	74.474	Seriola_dumerili
ENSEASG00005011599	RBFOX1	85	72.434	ENSSLDG00000009353	rbfox1	98	73.130	Seriola_lalandi_dorsalis
ENSEASG00005011599	RBFOX1	85	82.698	ENSSPUG00000009732	RBFOX1	87	83.901	Sphenodon_punctatus
ENSEASG00005011599	RBFOX1	97	74.447	ENSSPAG00000009723	rbfox1	100	76.108	Stegastes_partitus
ENSEASG00005011599	RBFOX1	100	99.494	ENSSSCG00000007917	RBFOX1	99	99.034	Sus_scrofa
ENSEASG00005011599	RBFOX1	98	93.077	ENSTGUG00000004562	RBFOX1	100	95.116	Taeniopygia_guttata
ENSEASG00005011599	RBFOX1	98	74.146	ENSTRUG00000020940	rbfox1	99	75.490	Takifugu_rubripes
ENSEASG00005011599	RBFOX1	67	54.921	ENSTNIG00000002567	rbfox1	100	58.917	Tetraodon_nigroviridis
ENSEASG00005011599	RBFOX1	78	89.655	ENSTBEG00000009169	-	78	89.655	Tupaia_belangeri
ENSEASG00005011599	RBFOX1	98	99.259	ENSTTRG00000005700	RBFOX1	97	99.259	Tursiops_truncatus
ENSEASG00005011599	RBFOX1	100	94.937	ENSUAMG00000024633	RBFOX1	100	94.444	Ursus_americanus
ENSEASG00005011599	RBFOX1	100	86.076	ENSUMAG00000003579	RBFOX1	99	86.076	Ursus_maritimus
ENSEASG00005011599	RBFOX1	78	100.000	ENSVPAG00000001284	RBFOX1	78	100.000	Vicugna_pacos
ENSEASG00005011599	RBFOX1	100	99.083	ENSVVUG00000017311	RBFOX1	100	99.083	Vulpes_vulpes