EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEASG00005011716 (Gene tree)
Gene ID
-
Gene Symbol
PABPN1
Alias
OPMD|PAB2|PABP2
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Equus_asinus_asinus
Status
putative
Strand
Plus strand
Length
4548 bases
Position
chrPSZQ01000160.1:3430301-3434848
Accession
8565
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEASP00005016900RRM_1PF00076.229e-1511
ENSEASP00005016902RRM_1PF00076.229.1e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEAST00005018359PABPN1-202921-ENSEASP00005016902306 (aa)-UPI000006F6E7
ENSEAST00005018357PABPN1-201915-ENSEASP00005016900304 (aa)-UPI000BAD67CC
Gene Model
Click here to download ENSEASG00005011716's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005011716's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEASG00005011716PABPN17245.833ENSEASG00005000777PABPN1L7548.309
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEASG00005011716PABPN162100.000ENSG00000258643BCL2L2-PABPN157100.000Homo_sapiens
ENSEASG00005011716PABPN1100100.000ENSG00000100836PABPN1100100.000Homo_sapiens
ENSEASG00005011716PABPN18670.455ENSAPOG00000016425pabpn18682.039Acanthochromis_polyacanthus
ENSEASG00005011716PABPN162100.000ENSAMEG00000007048BCL2L2-PABPN1100100.000Ailuropoda_melanoleuca
ENSEASG00005011716PABPN18567.300ENSACIG00000021744pabpn19482.143Amphilophus_citrinellus
ENSEASG00005011716PABPN18670.455ENSAOCG00000015805pabpn18682.039Amphiprion_ocellaris
ENSEASG00005011716PABPN18670.455ENSAPEG00000009623pabpn18682.039Amphiprion_percula
ENSEASG00005011716PABPN18670.833ENSATEG00000020531pabpn18682.524Anabas_testudineus
ENSEASG00005011716PABPN16688.670ENSACAG00000006185-7487.560Anolis_carolinensis
ENSEASG00005011716PABPN110090.850ENSANAG00000024513-10090.850Aotus_nancymaae
ENSEASG00005011716PABPN18567.045ENSACLG00000016374pabpn16680.905Astatotilapia_calliptera
ENSEASG00005011716PABPN18671.591ENSAMXG00000000452pabpn19483.929Astyanax_mexicanus
ENSEASG00005011716PABPN19275.177ENSBTAG00000050594-8987.255Bos_taurus
ENSEASG00005011716PABPN19276.868ENSBTAG00000053753-7198.429Bos_taurus
ENSEASG00005011716PABPN110099.346ENSBTAG00000006884PABPN110099.346Bos_taurus
ENSEASG00005011716PABPN1100100.000ENSCJAG00000007960-100100.000Callithrix_jacchus
ENSEASG00005011716PABPN15898.315ENSCJAG00000004407-8998.315Callithrix_jacchus
ENSEASG00005011716PABPN110097.059ENSCAFG00000011482PABPN110097.059Canis_familiaris
ENSEASG00005011716PABPN1100100.000ENSCAFG00020006651-100100.000Canis_lupus_dingo
ENSEASG00005011716PABPN1100100.000ENSCAFG00020007298-100100.000Canis_lupus_dingo
ENSEASG00005011716PABPN110099.673ENSCHIG00000012184PABPN110099.673Capra_hircus
ENSEASG00005011716PABPN162100.000ENSTSYG00000033996BCL2L2-PABPN1100100.000Carlito_syrichta
ENSEASG00005011716PABPN110098.366ENSCPOG00000025574PABPN110098.366Cavia_porcellus
ENSEASG00005011716PABPN1100100.000ENSCCAG00000033954BCL2L2-PABPN1100100.000Cebus_capucinus
ENSEASG00005011716PABPN1100100.000ENSCATG00000038536BCL2L2-PABPN1100100.000Cercocebus_atys
ENSEASG00005011716PABPN16780.000ENSCLAG00000012423PABPN16280.000Chinchilla_lanigera
ENSEASG00005011716PABPN110098.366ENSCSAG00000016036PABPN110098.366Chlorocebus_sabaeus
ENSEASG00005011716PABPN16788.293ENSCHOG00000004798BCL2L2-PABPN18888.293Choloepus_hoffmanni
ENSEASG00005011716PABPN15592.814ENSCPBG00000026060-9492.814Chrysemys_picta_bellii
ENSEASG00005011716PABPN16562.687ENSCING00000012468-8465.174Ciona_intestinalis
ENSEASG00005011716PABPN15860.674ENSCSAVG00000002001-9362.275Ciona_savignyi
ENSEASG00005011716PABPN162100.000ENSCANG00000009750BCL2L2-PABPN1100100.000Colobus_angolensis_palliatus
ENSEASG00005011716PABPN19682.712ENSCANG00000030980-7483.902Colobus_angolensis_palliatus
ENSEASG00005011716PABPN110097.386ENSCGRG00001019696Pabpn110099.438Cricetulus_griseus_chok1gshd
ENSEASG00005011716PABPN15899.438ENSCGRG00000011102Pabpn110099.438Cricetulus_griseus_crigri
ENSEASG00005011716PABPN18670.076ENSCSEG00000008774pabpn18980.476Cynoglossus_semilaevis
ENSEASG00005011716PABPN18667.803ENSCVAG00000003152pabpn18681.068Cyprinodon_variegatus
ENSEASG00005011716PABPN18270.518ENSDARG00000045373pabpn18683.495Danio_rerio
ENSEASG00005011716PABPN1100100.000ENSDNOG00000023682PABPN1100100.000Dasypus_novemcinctus
ENSEASG00005011716PABPN110098.693ENSDORG00000028966-10098.693Dipodomys_ordii
ENSEASG00005011716PABPN16263.351FBgn0005648Pabp28263.351Drosophila_melanogaster
ENSEASG00005011716PABPN16379.487ENSEBUG00000002322pabpn18379.897Eptatretus_burgeri
ENSEASG00005011716PABPN199100.000ENSECAG00000011652PABPN199100.000Equus_caballus
ENSEASG00005011716PABPN19391.197ENSEEUG00000012973-7293.365Erinaceus_europaeus
ENSEASG00005011716PABPN18673.485ENSELUG00000022654pabpn18585.437Esox_lucius
ENSEASG00005011716PABPN1100100.000ENSFCAG00000031922PABPN1100100.000Felis_catus
ENSEASG00005011716PABPN15898.876ENSFDAG00000018381BCL2L2-PABPN110098.876Fukomys_damarensis
ENSEASG00005011716PABPN18666.288ENSFHEG00000007215pabpn18680.097Fundulus_heteroclitus
ENSEASG00005011716PABPN18370.356ENSGMOG00000003922pabpn16683.505Gadus_morhua
ENSEASG00005011716PABPN16389.796ENSGALG00000052930-7973.432Gallus_gallus
ENSEASG00005011716PABPN18670.189ENSGAFG00000017099pabpn18682.126Gambusia_affinis
ENSEASG00005011716PABPN18667.754ENSGACG00000002167pabpn18777.982Gasterosteus_aculeatus
ENSEASG00005011716PABPN19382.168ENSGGOG00000025919-9884.459Gorilla_gorilla
ENSEASG00005011716PABPN19278.014ENSGGOG00000039675-7284.536Gorilla_gorilla
ENSEASG00005011716PABPN1100100.000ENSGGOG00000022683-100100.000Gorilla_gorilla
ENSEASG00005011716PABPN18670.833ENSHBUG00000019523pabpn18682.524Haplochromis_burtoni
ENSEASG00005011716PABPN15576.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSEASG00005011716PABPN19274.733ENSHGLG00000018588-7181.429Heterocephalus_glaber_female
ENSEASG00005011716PABPN110098.366ENSHGLG00000002927-10098.366Heterocephalus_glaber_female
ENSEASG00005011716PABPN15899.438ENSHGLG00100006673-10099.438Heterocephalus_glaber_male
ENSEASG00005011716PABPN19269.643ENSHGLG00100015565-7281.429Heterocephalus_glaber_male
ENSEASG00005011716PABPN15588.304ENSHGLG00100018935-9488.304Heterocephalus_glaber_male
ENSEASG00005011716PABPN18667.300ENSHCOG00000004655pabpn18681.553Hippocampus_comes
ENSEASG00005011716PABPN18671.212ENSIPUG00000008085PABPN18683.010Ictalurus_punctatus
ENSEASG00005011716PABPN18667.045ENSIPUG00000000180-8681.313Ictalurus_punctatus
ENSEASG00005011716PABPN158100.000ENSSTOG00000029847BCL2L2-PABPN1100100.000Ictidomys_tridecemlineatus
ENSEASG00005011716PABPN158100.000ENSJJAG00000023507Gm20521100100.000Jaculus_jaculus
ENSEASG00005011716PABPN16881.429ENSKMAG00000018748pabpn18681.643Kryptolebias_marmoratus
ENSEASG00005011716PABPN18670.833ENSLBEG00000027266pabpn18682.524Labrus_bergylta
ENSEASG00005011716PABPN15887.640ENSLACG00000000646pabpn17989.444Latimeria_chalumnae
ENSEASG00005011716PABPN16865.238ENSLOCG00000004694pabpn1l9565.700Lepisosteus_oculatus
ENSEASG00005011716PABPN18271.032ENSLOCG00000000796pabpn16984.021Lepisosteus_oculatus
ENSEASG00005011716PABPN162100.000ENSMFAG00000032183BCL2L2-PABPN1100100.000Macaca_fascicularis
ENSEASG00005011716PABPN19778.595ENSMMUG00000048382-6883.333Macaca_mulatta
ENSEASG00005011716PABPN110091.503ENSMMUG00000014747BCL2L2-PABPN1100100.000Macaca_mulatta
ENSEASG00005011716PABPN17482.796ENSMNEG00000035750-9992.908Macaca_nemestrina
ENSEASG00005011716PABPN1100100.000ENSMNEG00000045065BCL2L2-PABPN1100100.000Macaca_nemestrina
ENSEASG00005011716PABPN162100.000ENSMLEG00000043862BCL2L2-PABPN1100100.000Mandrillus_leucophaeus
ENSEASG00005011716PABPN19774.324ENSMLEG00000034623-9990.780Mandrillus_leucophaeus
ENSEASG00005011716PABPN18570.881ENSMAMG00000007979pabpn16882.266Mastacembelus_armatus
ENSEASG00005011716PABPN18270.238ENSMZEG00005011904pabpn16682.474Maylandia_zebra
ENSEASG00005011716PABPN19897.342ENSMAUG00000007383Gm205219997.342Mesocricetus_auratus
ENSEASG00005011716PABPN110099.673ENSMICG00000010002BCL2L2-PABPN110099.673Microcebus_murinus
ENSEASG00005011716PABPN110097.059ENSMOCG00000018557Gm2052110097.059Microtus_ochrogaster
ENSEASG00005011716PABPN18671.212ENSMMOG00000005405pabpn18683.010Mola_mola
ENSEASG00005011716PABPN110097.039ENSMODG00000004535-10097.039Monodelphis_domestica
ENSEASG00005011716PABPN18570.498ENSMALG00000019612pabpn16782.266Monopterus_albus
ENSEASG00005011716PABPN16297.884MGP_CAROLIEiJ_G0019276Gm205215797.884Mus_caroli
ENSEASG00005011716PABPN110096.405MGP_CAROLIEiJ_G0019277Pabpn110097.753Mus_caroli
ENSEASG00005011716PABPN110096.732ENSMUSG00000022194Pabpn110098.315Mus_musculus
ENSEASG00005011716PABPN16298.413ENSMUSG00000092232Gm205215798.413Mus_musculus
ENSEASG00005011716PABPN16298.413MGP_PahariEiJ_G0030294Gm205215798.413Mus_pahari
ENSEASG00005011716PABPN110096.732MGP_PahariEiJ_G0030295Pabpn110098.315Mus_pahari
ENSEASG00005011716PABPN110096.732MGP_SPRETEiJ_G0020166Pabpn110098.315Mus_spretus
ENSEASG00005011716PABPN16298.413MGP_SPRETEiJ_G0020165Gm205215798.413Mus_spretus
ENSEASG00005011716PABPN155100.000ENSMPUG00000006775-99100.000Mustela_putorius_furo
ENSEASG00005011716PABPN19289.085ENSMLUG00000012452-7092.958Myotis_lucifugus
ENSEASG00005011716PABPN19578.966ENSMLUG00000028677-7594.634Myotis_lucifugus
ENSEASG00005011716PABPN16297.884ENSMLUG00000003800-10097.884Myotis_lucifugus
ENSEASG00005011716PABPN162100.000ENSNGAG00000019529Gm2052157100.000Nannospalax_galili
ENSEASG00005011716PABPN18270.238ENSNBRG00000023955pabpn19482.143Neolamprologus_brichardi
ENSEASG00005011716PABPN19776.510ENSNLEG00000030598-7981.991Nomascus_leucogenys
ENSEASG00005011716PABPN169100.000ENSNLEG00000015007-75100.000Nomascus_leucogenys
ENSEASG00005011716PABPN19282.206ENSODEG00000003739-7586.425Octodon_degus
ENSEASG00005011716PABPN110098.366ENSODEG00000002083BCL2L2-PABPN110098.366Octodon_degus
ENSEASG00005011716PABPN15887.079ENSODEG00000011555-8986.826Octodon_degus
ENSEASG00005011716PABPN18270.238ENSONIG00000008112pabpn16682.474Oreochromis_niloticus
ENSEASG00005011716PABPN19996.711ENSOCUG00000016174PABPN110096.711Oryctolagus_cuniculus
ENSEASG00005011716PABPN16782.524ENSORLG00000027900pabpn18479.902Oryzias_latipes
ENSEASG00005011716PABPN16782.524ENSORLG00020004681pabpn16782.759Oryzias_latipes_hni
ENSEASG00005011716PABPN16882.775ENSORLG00015000018pabpn18683.010Oryzias_latipes_hsok
ENSEASG00005011716PABPN16879.227ENSOMEG00000016618pabpn16982.653Oryzias_melastigma
ENSEASG00005011716PABPN1100100.000ENSOGAG00000008710PABPN1100100.000Otolemur_garnettii
ENSEASG00005011716PABPN162100.000ENSOARG00000019336BCL2L2-PABPN152100.000Ovis_aries
ENSEASG00005011716PABPN15583.234ENSPPAG00000039421-9383.234Pan_paniscus
ENSEASG00005011716PABPN162100.000ENSPPAG00000028984BCL2L2-PABPN199100.000Pan_paniscus
ENSEASG00005011716PABPN1100100.000ENSPPRG00000010567PABPN1100100.000Panthera_pardus
ENSEASG00005011716PABPN158100.000ENSPTIG00000001063BCL2L2-PABPN1100100.000Panthera_tigris_altaica
ENSEASG00005011716PABPN19272.695ENSPTRG00000047273-9066.548Pan_troglodytes
ENSEASG00005011716PABPN1100100.000ENSPTRG00000006167BCL2L2100100.000Pan_troglodytes
ENSEASG00005011716PABPN1100100.000ENSPANG00000021100BCL2L2-PABPN1100100.000Papio_anubis
ENSEASG00005011716PABPN19779.054ENSPANG00000023326-9992.908Papio_anubis
ENSEASG00005011716PABPN16881.818ENSPKIG00000018052pabpn18682.524Paramormyrops_kingsleyae
ENSEASG00005011716PABPN16285.789ENSPKIG00000008144-6782.759Paramormyrops_kingsleyae
ENSEASG00005011716PABPN16463.131ENSPKIG00000008340pabpn1l9263.131Paramormyrops_kingsleyae
ENSEASG00005011716PABPN18269.444ENSPMGG00000022027pabpn16981.959Periophthalmus_magnuspinnatus
ENSEASG00005011716PABPN110097.386ENSPEMG00000008332Gm2052110097.386Peromyscus_maniculatus_bairdii
ENSEASG00005011716PABPN15477.778ENSPMAG00000006212pabpn18476.355Petromyzon_marinus
ENSEASG00005011716PABPN110096.732ENSPCIG00000027751-10096.732Phascolarctos_cinereus
ENSEASG00005011716PABPN18667.547ENSPFOG00000010351pabpn18680.676Poecilia_formosa
ENSEASG00005011716PABPN18669.202ENSPLAG00000022696pabpn16881.373Poecilia_latipinna
ENSEASG00005011716PABPN18667.547ENSPMEG00000020856pabpn18680.676Poecilia_mexicana
ENSEASG00005011716PABPN18667.925ENSPREG00000011278pabpn18681.159Poecilia_reticulata
ENSEASG00005011716PABPN19794.218ENSPPYG00000005663PABPN19994.218Pongo_abelii
ENSEASG00005011716PABPN16985.308ENSPCAG00000005902PABPN17285.308Procavia_capensis
ENSEASG00005011716PABPN110099.673ENSPCOG00000028047BCL2L2-PABPN110099.673Propithecus_coquereli
ENSEASG00005011716PABPN110097.059ENSPVAG00000005270PABPN110097.059Pteropus_vampyrus
ENSEASG00005011716PABPN18670.833ENSPNYG00000013182pabpn18682.524Pundamilia_nyererei
ENSEASG00005011716PABPN18671.970ENSPNAG00000023526pabpn18683.981Pygocentrus_nattereri
ENSEASG00005011716PABPN16562.500ENSPNAG00000021666pabpn1l9464.179Pygocentrus_nattereri
ENSEASG00005011716PABPN110097.059ENSRNOG00000042195Pabpn110097.059Rattus_norvegicus
ENSEASG00005011716PABPN19285.357ENSRBIG00000042811-9086.636Rhinopithecus_bieti
ENSEASG00005011716PABPN19783.784ENSRBIG00000039547-7585.366Rhinopithecus_bieti
ENSEASG00005011716PABPN158100.000ENSRBIG00000040762BCL2L2-PABPN155100.000Rhinopithecus_bieti
ENSEASG00005011716PABPN19983.607ENSRROG00000040409-7585.854Rhinopithecus_roxellana
ENSEASG00005011716PABPN19282.143ENSRROG00000036409-6782.949Rhinopithecus_roxellana
ENSEASG00005011716PABPN158100.000ENSRROG00000045535BCL2L2-PABPN1100100.000Rhinopithecus_roxellana
ENSEASG00005011716PABPN16293.564ENSSBOG00000026930BCL2L2-PABPN199100.000Saimiri_boliviensis_boliviensis
ENSEASG00005011716PABPN17187.156ENSSHAG00000014841-8797.354Sarcophilus_harrisii
ENSEASG00005011716PABPN18765.660ENSSHAG00000007707-8974.408Sarcophilus_harrisii
ENSEASG00005011716PABPN16860.096ENSSFOG00015015833pabpn1l8763.918Scleropages_formosus
ENSEASG00005011716PABPN17177.828ENSSFOG00015012565pabpn19081.553Scleropages_formosus
ENSEASG00005011716PABPN18670.076ENSSFOG00015014718pabpn18682.039Scleropages_formosus
ENSEASG00005011716PABPN18670.833ENSSMAG00000020157pabpn18682.524Scophthalmus_maximus
ENSEASG00005011716PABPN18570.498ENSSDUG00000020582pabpn16782.266Seriola_dumerili
ENSEASG00005011716PABPN18670.833ENSSLDG00000007118pabpn18682.524Seriola_lalandi_dorsalis
ENSEASG00005011716PABPN15591.617ENSSPUG00000018308-9491.617Sphenodon_punctatus
ENSEASG00005011716PABPN18670.833ENSSPAG00000021658pabpn18682.524Stegastes_partitus
ENSEASG00005011716PABPN15855.114ENSSSCG00000038472-9154.491Sus_scrofa
ENSEASG00005011716PABPN1100100.000ENSSSCG00000002023PABPN1100100.000Sus_scrofa
ENSEASG00005011716PABPN17373.543ENSSSCG00000034805-7669.118Sus_scrofa
ENSEASG00005011716PABPN18671.212ENSTRUG00000023664pabpn18683.010Takifugu_rubripes
ENSEASG00005011716PABPN16780.583ENSTNIG00000005369pabpn19280.788Tetraodon_nigroviridis
ENSEASG00005011716PABPN110099.346ENSUAMG00000024460PABPN110099.346Ursus_americanus
ENSEASG00005011716PABPN162100.000ENSUMAG00000014288BCL2L2-PABPN157100.000Ursus_maritimus
ENSEASG00005011716PABPN162100.000ENSVVUG00000019912BCL2L2-PABPN17698.446Vulpes_vulpes
ENSEASG00005011716PABPN16490.306ENSXETG00000014597pabpn16692.893Xenopus_tropicalis
ENSEASG00005011716PABPN15768.927ENSXCOG00000005158pabpn18981.579Xiphophorus_couchianus
ENSEASG00005011716PABPN18668.302ENSXMAG00000006196pabpn18681.643Xiphophorus_maculatus

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