EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005011764 (Gene tree)
Gene ID: -
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 38104 bases
Position: chrPSZQ01008106.1:4264609-4302712
Accession: 4861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005017263	ResIII	PF04851.15	1.2e-07	1	1
ENSEASP00005017242	ResIII	PF04851.15	1.6e-07	1	1
ENSEASP00005017236	ResIII	PF04851.15	1.7e-07	1	1
ENSEASP00005017245	ResIII	PF04851.15	2.8e-07	1	1
ENSEASP00005017268	ResIII	PF04851.15	4.3e-07	1	1
ENSEASP00005017271	ResIII	PF04851.15	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005018748	HELLS-204	333	-	ENSEASP00005017257	110 (aa)	-	-
ENSEAST00005018763	HELLS-207	2196	-	ENSEASP00005017271	731 (aa)	-	-
ENSEAST00005018760	HELLS-206	2361	-	ENSEASP00005017268	786 (aa)	-	-
ENSEAST00005018754	HELLS-205	2439	-	ENSEASP00005017263	812 (aa)	-	-
ENSEAST00005018723	HELLS-201	2547	-	ENSEASP00005017236	848 (aa)	-	-
ENSEAST00005018732	HELLS-202	2517	-	ENSEASP00005017242	838 (aa)	-	-
ENSEAST00005018736	HELLS-203	2442	-	ENSEASP00005017245	813 (aa)	-	-

Gene Model

Click here to download ENSEASG00005011764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005011764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005011764	HELLS	65	57.143	ENSEASG00005008218	SMARCA1	53	48.606
ENSEASG00005011764	HELLS	74	39.427	ENSEASG00005023433	CHD6	72	34.989
ENSEASG00005011764	HELLS	63	56.614	ENSEASG00005001866	SMARCA5	55	47.600
ENSEASG00005011764	HELLS	71	40.454	ENSEASG00005007364	CHD1L	52	40.117
ENSEASG00005011764	HELLS	72	30.000	ENSEASG00005004511	RAD54L	70	30.000
ENSEASG00005011764	HELLS	74	37.818	ENSEASG00005012382	SMARCAD1	61	37.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005011764	HELLS	100	95.232	ENSG00000119969	HELLS	100	96.779	Homo_sapiens
ENSEASG00005011764	HELLS	97	65.085	ENSAPOG00000007707	hells	99	65.561	Acanthochromis_polyacanthus
ENSEASG00005011764	HELLS	100	96.186	ENSAMEG00000013525	HELLS	100	96.186	Ailuropoda_melanoleuca
ENSEASG00005011764	HELLS	85	68.296	ENSACIG00000018996	hells	99	66.667	Amphilophus_citrinellus
ENSEASG00005011764	HELLS	96	67.219	ENSAOCG00000006348	hells	96	66.253	Amphiprion_ocellaris
ENSEASG00005011764	HELLS	96	66.837	ENSAPEG00000001422	hells	96	65.881	Amphiprion_percula
ENSEASG00005011764	HELLS	96	67.414	ENSATEG00000008107	hells	99	65.113	Anabas_testudineus
ENSEASG00005011764	HELLS	95	82.166	ENSAPLG00000002649	HELLS	99	82.061	Anas_platyrhynchos
ENSEASG00005011764	HELLS	88	75.242	ENSACAG00000028785	HELLS	96	75.242	Anolis_carolinensis
ENSEASG00005011764	HELLS	100	92.840	ENSANAG00000034765	-	100	93.562	Aotus_nancymaae
ENSEASG00005011764	HELLS	97	66.535	ENSACLG00000007613	hells	99	64.654	Astatotilapia_calliptera
ENSEASG00005011764	HELLS	84	70.091	ENSAMXG00000002088	hells	98	69.778	Astyanax_mexicanus
ENSEASG00005011764	HELLS	83	95.529	ENSBTAG00000005979	HELLS	100	95.529	Bos_taurus
ENSEASG00005011764	HELLS	100	93.437	ENSCJAG00000015819	HELLS	100	93.705	Callithrix_jacchus
ENSEASG00005011764	HELLS	100	96.190	ENSCAFG00000008090	HELLS	100	96.190	Canis_familiaris
ENSEASG00005011764	HELLS	96	96.056	ENSCAFG00020004809	HELLS	98	97.078	Canis_lupus_dingo
ENSEASG00005011764	HELLS	100	93.842	ENSCHIG00000019462	HELLS	100	92.243	Capra_hircus
ENSEASG00005011764	HELLS	100	92.579	ENSTSYG00000005811	-	99	93.991	Carlito_syrichta
ENSEASG00005011764	HELLS	100	92.253	ENSCPOG00000003043	HELLS	100	92.253	Cavia_porcellus
ENSEASG00005011764	HELLS	57	95.954	ENSCCAG00000026761	HELLS	97	95.954	Cebus_capucinus
ENSEASG00005011764	HELLS	100	89.819	ENSCATG00000033830	HELLS	100	96.353	Cercocebus_atys
ENSEASG00005011764	HELLS	100	92.849	ENSCLAG00000003938	HELLS	100	93.074	Chinchilla_lanigera
ENSEASG00005011764	HELLS	88	96.213	ENSCSAG00000006181	HELLS	100	96.213	Chlorocebus_sabaeus
ENSEASG00005011764	HELLS	88	83.077	ENSCPBG00000025739	HELLS	99	84.786	Chrysemys_picta_bellii
ENSEASG00005011764	HELLS	100	89.593	ENSCANG00000037736	HELLS	100	96.073	Colobus_angolensis_palliatus
ENSEASG00005011764	HELLS	100	90.389	ENSCGRG00001017410	Hells	100	90.024	Cricetulus_griseus_chok1gshd
ENSEASG00005011764	HELLS	94	65.415	ENSCSEG00000016985	hells	99	65.026	Cynoglossus_semilaevis
ENSEASG00005011764	HELLS	70	63.353	ENSCVAG00000000159	hells	97	63.969	Cyprinodon_variegatus
ENSEASG00005011764	HELLS	95	67.178	ENSDARG00000057738	hells	95	66.544	Danio_rerio
ENSEASG00005011764	HELLS	78	95.103	ENSDNOG00000017758	HELLS	100	95.103	Dasypus_novemcinctus
ENSEASG00005011764	HELLS	100	91.776	ENSDORG00000011812	Hells	100	92.528	Dipodomys_ordii
ENSEASG00005011764	HELLS	78	53.804	ENSEBUG00000016152	hells	92	56.891	Eptatretus_burgeri
ENSEASG00005011764	HELLS	100	99.403	ENSECAG00000018810	HELLS	100	99.403	Equus_caballus
ENSEASG00005011764	HELLS	81	98.913	ENSEEUG00000007680	HELLS	91	98.913	Erinaceus_europaeus
ENSEASG00005011764	HELLS	99	65.093	ENSELUG00000014909	hells	94	65.093	Esox_lucius
ENSEASG00005011764	HELLS	88	97.055	ENSFCAG00000005206	HELLS	100	97.055	Felis_catus
ENSEASG00005011764	HELLS	99	81.242	ENSFALG00000007136	HELLS	99	81.144	Ficedula_albicollis
ENSEASG00005011764	HELLS	100	91.230	ENSFDAG00000010042	HELLS	100	92.588	Fukomys_damarensis
ENSEASG00005011764	HELLS	99	63.748	ENSFHEG00000022950	hells	97	64.326	Fundulus_heteroclitus
ENSEASG00005011764	HELLS	96	82.586	ENSGALG00000005451	HELLS	100	83.381	Gallus_gallus
ENSEASG00005011764	HELLS	99	64.286	ENSGAFG00000001204	hells	96	63.538	Gambusia_affinis
ENSEASG00005011764	HELLS	95	64.865	ENSGACG00000003897	hells	91	64.923	Gasterosteus_aculeatus
ENSEASG00005011764	HELLS	88	82.913	ENSGAGG00000010269	HELLS	100	84.648	Gopherus_agassizii
ENSEASG00005011764	HELLS	100	90.465	ENSGGOG00000008103	HELLS	100	96.359	Gorilla_gorilla
ENSEASG00005011764	HELLS	97	66.535	ENSHBUG00000010270	hells	99	64.654	Haplochromis_burtoni
ENSEASG00005011764	HELLS	75	90.491	ENSHGLG00000006537	-	100	90.491	Heterocephalus_glaber_female
ENSEASG00005011764	HELLS	99	92.778	ENSHGLG00000011377	-	99	93.643	Heterocephalus_glaber_female
ENSEASG00005011764	HELLS	99	92.534	ENSHGLG00100017230	-	99	93.399	Heterocephalus_glaber_male
ENSEASG00005011764	HELLS	90	83.673	ENSHGLG00100001957	-	95	83.518	Heterocephalus_glaber_male
ENSEASG00005011764	HELLS	87	65.537	ENSHCOG00000001119	hells	96	65.585	Hippocampus_comes
ENSEASG00005011764	HELLS	99	65.233	ENSIPUG00000002634	HELLS	97	63.766	Ictalurus_punctatus
ENSEASG00005011764	HELLS	100	93.674	ENSSTOG00000021976	HELLS	100	94.046	Ictidomys_tridecemlineatus
ENSEASG00005011764	HELLS	99	88.462	ENSJJAG00000000865	Hells	99	88.462	Jaculus_jaculus
ENSEASG00005011764	HELLS	99	66.131	ENSKMAG00000017279	hells	95	66.131	Kryptolebias_marmoratus
ENSEASG00005011764	HELLS	98	66.335	ENSLBEG00000027807	hells	96	64.897	Labrus_bergylta
ENSEASG00005011764	HELLS	100	93.674	ENSLAFG00000007049	HELLS	100	94.775	Loxodonta_africana
ENSEASG00005011764	HELLS	100	94.749	ENSMFAG00000044053	HELLS	99	96.104	Macaca_fascicularis
ENSEASG00005011764	HELLS	100	87.879	ENSMMUG00000017255	HELLS	100	96.243	Macaca_mulatta
ENSEASG00005011764	HELLS	100	89.819	ENSMNEG00000042628	HELLS	100	96.353	Macaca_nemestrina
ENSEASG00005011764	HELLS	100	94.749	ENSMLEG00000041751	HELLS	99	96.104	Mandrillus_leucophaeus
ENSEASG00005011764	HELLS	95	65.122	ENSMAMG00000009850	hells	98	67.197	Mastacembelus_armatus
ENSEASG00005011764	HELLS	97	66.535	ENSMZEG00005018414	hells	99	64.654	Maylandia_zebra
ENSEASG00005011764	HELLS	97	80.348	ENSMGAG00000006818	HELLS	97	83.710	Meleagris_gallopavo
ENSEASG00005011764	HELLS	98	90.302	ENSMAUG00000021941	Hells	97	90.633	Mesocricetus_auratus
ENSEASG00005011764	HELLS	73	93.902	ENSMICG00000046554	-	95	93.902	Microcebus_murinus
ENSEASG00005011764	HELLS	99	91.905	ENSMOCG00000019342	Hells	100	91.905	Microtus_ochrogaster
ENSEASG00005011764	HELLS	99	60.692	ENSMMOG00000007950	hells	98	59.927	Mola_mola
ENSEASG00005011764	HELLS	98	84.204	ENSMODG00000005589	-	51	85.500	Monodelphis_domestica
ENSEASG00005011764	HELLS	97	65.309	ENSMALG00000010244	hells	94	63.671	Monopterus_albus
ENSEASG00005011764	HELLS	100	90.754	MGP_CAROLIEiJ_G0022930	Hells	100	91.495	Mus_caroli
ENSEASG00005011764	HELLS	100	90.633	ENSMUSG00000025001	Hells	100	91.373	Mus_musculus
ENSEASG00005011764	HELLS	100	91.606	MGP_PahariEiJ_G0014423	Hells	100	92.588	Mus_pahari
ENSEASG00005011764	HELLS	100	90.998	MGP_SPRETEiJ_G0023848	Hells	100	91.859	Mus_spretus
ENSEASG00005011764	HELLS	100	96.181	ENSMPUG00000017131	HELLS	100	96.181	Mustela_putorius_furo
ENSEASG00005011764	HELLS	100	92.243	ENSMLUG00000030511	HELLS	100	92.243	Myotis_lucifugus
ENSEASG00005011764	HELLS	100	90.226	ENSNGAG00000014049	Hells	100	90.226	Nannospalax_galili
ENSEASG00005011764	HELLS	97	63.233	ENSNBRG00000024242	hells	99	61.761	Neolamprologus_brichardi
ENSEASG00005011764	HELLS	100	89.593	ENSNLEG00000012987	HELLS	100	95.933	Nomascus_leucogenys
ENSEASG00005011764	HELLS	100	89.988	ENSODEG00000015916	HELLS	100	89.988	Octodon_degus
ENSEASG00005011764	HELLS	99	65.105	ENSONIG00000013166	hells	95	65.228	Oreochromis_niloticus
ENSEASG00005011764	HELLS	99	84.775	ENSOANG00000005139	HELLS	100	85.127	Ornithorhynchus_anatinus
ENSEASG00005011764	HELLS	100	94.153	ENSOCUG00000026731	HELLS	100	94.153	Oryctolagus_cuniculus
ENSEASG00005011764	HELLS	99	64.982	ENSORLG00000000987	hells	97	65.245	Oryzias_latipes
ENSEASG00005011764	HELLS	99	64.655	ENSORLG00020003952	hells	97	64.492	Oryzias_latipes_hni
ENSEASG00005011764	HELLS	99	64.858	ENSORLG00015010960	hells	97	64.617	Oryzias_latipes_hsok
ENSEASG00005011764	HELLS	99	64.348	ENSOMEG00000000135	hells	94	64.691	Oryzias_melastigma
ENSEASG00005011764	HELLS	100	92.822	ENSOGAG00000017145	HELLS	99	93.486	Otolemur_garnettii
ENSEASG00005011764	HELLS	100	95.107	ENSOARG00000004495	HELLS	100	95.107	Ovis_aries
ENSEASG00005011764	HELLS	100	90.584	ENSPPAG00000001726	HELLS	100	96.499	Pan_paniscus
ENSEASG00005011764	HELLS	88	96.914	ENSPPRG00000005839	HELLS	100	96.914	Panthera_pardus
ENSEASG00005011764	HELLS	100	95.585	ENSPTIG00000007647	HELLS	100	96.914	Panthera_tigris_altaica
ENSEASG00005011764	HELLS	100	90.584	ENSPTRG00000002778	HELLS	99	95.708	Pan_troglodytes
ENSEASG00005011764	HELLS	100	89.819	ENSPANG00000033528	HELLS	100	96.353	Papio_anubis
ENSEASG00005011764	HELLS	99	64.461	ENSPKIG00000010890	hells	99	63.308	Paramormyrops_kingsleyae
ENSEASG00005011764	HELLS	96	81.818	ENSPSIG00000005462	HELLS	100	82.346	Pelodiscus_sinensis
ENSEASG00005011764	HELLS	97	62.857	ENSPMGG00000014690	hells	98	66.521	Periophthalmus_magnuspinnatus
ENSEASG00005011764	HELLS	93	89.535	ENSPEMG00000017579	Hells	100	89.535	Peromyscus_maniculatus_bairdii
ENSEASG00005011764	HELLS	98	60.688	ENSPMAG00000004376	hells	98	60.442	Petromyzon_marinus
ENSEASG00005011764	HELLS	100	84.734	ENSPCIG00000013361	HELLS	100	84.679	Phascolarctos_cinereus
ENSEASG00005011764	HELLS	99	63.268	ENSPFOG00000001954	hells	96	63.057	Poecilia_formosa
ENSEASG00005011764	HELLS	99	63.145	ENSPLAG00000006504	hells	99	63.421	Poecilia_latipinna
ENSEASG00005011764	HELLS	99	63.268	ENSPMEG00000003024	hells	99	63.561	Poecilia_mexicana
ENSEASG00005011764	HELLS	99	63.022	ENSPREG00000020337	hells	96	62.816	Poecilia_reticulata
ENSEASG00005011764	HELLS	100	89.944	ENSPPYG00000002502	HELLS	100	89.944	Pongo_abelii
ENSEASG00005011764	HELLS	90	98.462	ENSPCAG00000013618	HELLS	100	87.843	Procavia_capensis
ENSEASG00005011764	HELLS	100	92.570	ENSPCOG00000023985	HELLS	99	95.960	Propithecus_coquereli
ENSEASG00005011764	HELLS	92	97.238	ENSPVAG00000017899	HELLS	92	97.238	Pteropus_vampyrus
ENSEASG00005011764	HELLS	97	65.263	ENSPNYG00000009100	hells	99	63.329	Pundamilia_nyererei
ENSEASG00005011764	HELLS	97	65.330	ENSPNAG00000029968	hells	98	63.648	Pygocentrus_nattereri
ENSEASG00005011764	HELLS	100	91.289	ENSRNOG00000047692	LOC100911660	100	91.606	Rattus_norvegicus
ENSEASG00005011764	HELLS	100	91.289	ENSRNOG00000047104	Hells	100	91.289	Rattus_norvegicus
ENSEASG00005011764	HELLS	100	88.750	ENSRBIG00000041080	HELLS	100	94.798	Rhinopithecus_bieti
ENSEASG00005011764	HELLS	100	90.618	ENSRROG00000040169	HELLS	100	96.073	Rhinopithecus_roxellana
ENSEASG00005011764	HELLS	99	84.860	ENSSHAG00000014358	HELLS	99	86.585	Sarcophilus_harrisii
ENSEASG00005011764	HELLS	96	67.465	ENSSFOG00015017895	hells	99	65.652	Scleropages_formosus
ENSEASG00005011764	HELLS	99	65.556	ENSSMAG00000017423	hells	99	64.625	Scophthalmus_maximus
ENSEASG00005011764	HELLS	98	66.129	ENSSDUG00000016924	hells	99	65.863	Seriola_dumerili
ENSEASG00005011764	HELLS	98	64.259	ENSSLDG00000018960	hells	94	64.259	Seriola_lalandi_dorsalis
ENSEASG00005011764	HELLS	100	79.779	ENSSPUG00000017425	HELLS	100	82.084	Sphenodon_punctatus
ENSEASG00005011764	HELLS	96	67.179	ENSSPAG00000015579	hells	99	66.131	Stegastes_partitus
ENSEASG00005011764	HELLS	100	95.823	ENSSSCG00000010486	HELLS	100	95.823	Sus_scrofa
ENSEASG00005011764	HELLS	100	81.311	ENSTGUG00000007157	HELLS	99	80.941	Taeniopygia_guttata
ENSEASG00005011764	HELLS	95	66.838	ENSTRUG00000000350	hells	97	65.006	Takifugu_rubripes
ENSEASG00005011764	HELLS	98	57.038	ENSTNIG00000003738	hells	98	57.481	Tetraodon_nigroviridis
ENSEASG00005011764	HELLS	100	94.282	ENSUAMG00000003343	HELLS	100	95.383	Ursus_americanus
ENSEASG00005011764	HELLS	100	95.128	ENSUMAG00000004748	HELLS	99	96.798	Ursus_maritimus
ENSEASG00005011764	HELLS	100	94.869	ENSVPAG00000010115	HELLS	100	94.869	Vicugna_pacos
ENSEASG00005011764	HELLS	100	96.659	ENSVVUG00000022808	HELLS	100	96.659	Vulpes_vulpes
ENSEASG00005011764	HELLS	99	62.655	ENSXCOG00000013840	hells	98	62.562	Xiphophorus_couchianus
ENSEASG00005011764	HELLS	99	63.391	ENSXMAG00000005731	hells	97	65.064	Xiphophorus_maculatus