EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005012012 (Gene tree)
Gene ID: -
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 14850 bases
Position: chrPSZQ01004664.1:7600424-7615273
Accession: 10774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005017348	RRM_1	PF00076.22	3.4e-30	1	2
ENSEASP00005017348	RRM_1	PF00076.22	3.4e-30	2	2
ENSEASP00005017349	RRM_1	PF00076.22	3.6e-30	1	2
ENSEASP00005017349	RRM_1	PF00076.22	3.6e-30	2	2
ENSEASP00005017352	RRM_1	PF00076.22	4e-30	1	2
ENSEASP00005017352	RRM_1	PF00076.22	4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005018847	SFPQ-202	2073	-	ENSEASP00005017349	686 (aa)	-	-
ENSEAST00005018846	SFPQ-201	2121	-	ENSEASP00005017348	670 (aa)	-	UPI000C9DFCC1
ENSEAST00005018850	SFPQ-203	2468	-	ENSEASP00005017352	708 (aa)	-	UPI000C9E6691

Gene Model

Click here to download ENSEASG00005012012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005012012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005012012	SFPQ	54	68.579	ENSEASG00005000119	PSPC1	83	73.006

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005012012	SFPQ	100	97.055	ENSG00000116560	SFPQ	100	100.000	Homo_sapiens
ENSEASG00005012012	SFPQ	62	100.000	ENSAMEG00000000815	SFPQ	100	100.000	Ailuropoda_melanoleuca
ENSEASG00005012012	SFPQ	61	73.318	ENSACIG00000000905	sfpq	72	70.481	Amphilophus_citrinellus
ENSEASG00005012012	SFPQ	61	74.246	ENSAOCG00000002889	sfpq	61	73.696	Amphiprion_ocellaris
ENSEASG00005012012	SFPQ	61	74.246	ENSAPEG00000016556	sfpq	61	73.696	Amphiprion_percula
ENSEASG00005012012	SFPQ	73	68.846	ENSATEG00000002981	sfpq	67	76.082	Anabas_testudineus
ENSEASG00005012012	SFPQ	50	75.424	ENSANAG00000021268	-	100	74.359	Aotus_nancymaae
ENSEASG00005012012	SFPQ	91	96.226	ENSANAG00000027438	-	68	83.447	Aotus_nancymaae
ENSEASG00005012012	SFPQ	63	72.973	ENSACLG00000022332	sfpq	63	73.303	Astatotilapia_calliptera
ENSEASG00005012012	SFPQ	62	69.841	ENSAMXG00000011538	sfpq	65	72.273	Astyanax_mexicanus
ENSEASG00005012012	SFPQ	100	98.169	ENSBTAG00000016328	SFPQ	100	98.169	Bos_taurus
ENSEASG00005012012	SFPQ	100	96.629	ENSCJAG00000001431	SFPQ	100	96.629	Callithrix_jacchus
ENSEASG00005012012	SFPQ	97	75.150	ENSCAFG00000017608	-	71	88.199	Canis_familiaris
ENSEASG00005012012	SFPQ	84	87.500	ENSCAFG00000018271	-	66	92.971	Canis_familiaris
ENSEASG00005012012	SFPQ	100	92.090	ENSCAFG00000003595	-	100	92.090	Canis_familiaris
ENSEASG00005012012	SFPQ	50	90.883	ENSCAFG00020010702	-	100	90.883	Canis_lupus_dingo
ENSEASG00005012012	SFPQ	84	87.354	ENSCAFG00020004881	-	66	92.971	Canis_lupus_dingo
ENSEASG00005012012	SFPQ	100	97.479	ENSCHIG00000023097	SFPQ	100	97.479	Capra_hircus
ENSEASG00005012012	SFPQ	50	100.000	ENSTSYG00000037120	-	100	100.000	Carlito_syrichta
ENSEASG00005012012	SFPQ	50	91.168	ENSCPOG00000015018	-	100	88.705	Cavia_porcellus
ENSEASG00005012012	SFPQ	100	96.494	ENSCCAG00000029361	-	100	96.494	Cebus_capucinus
ENSEASG00005012012	SFPQ	63	96.698	ENSCATG00000036179	-	62	96.927	Cercocebus_atys
ENSEASG00005012012	SFPQ	68	73.931	ENSCATG00000032664	-	67	74.286	Cercocebus_atys
ENSEASG00005012012	SFPQ	50	100.000	ENSCLAG00000009583	-	100	100.000	Chinchilla_lanigera
ENSEASG00005012012	SFPQ	100	96.919	ENSCSAG00000001082	SFPQ	100	96.919	Chlorocebus_sabaeus
ENSEASG00005012012	SFPQ	54	95.263	ENSCHOG00000009131	SFPQ	100	95.263	Choloepus_hoffmanni
ENSEASG00005012012	SFPQ	63	92.428	ENSCPBG00000018674	SFPQ	69	92.793	Chrysemys_picta_bellii
ENSEASG00005012012	SFPQ	50	100.000	ENSCANG00000028087	-	100	100.000	Colobus_angolensis_palliatus
ENSEASG00005012012	SFPQ	85	92.679	ENSCGRG00001011698	Sfpq	69	98.347	Cricetulus_griseus_chok1gshd
ENSEASG00005012012	SFPQ	61	99.536	ENSCGRG00000010128	Sfpq	95	99.536	Cricetulus_griseus_crigri
ENSEASG00005012012	SFPQ	76	65.736	ENSCSEG00000007852	sfpq	66	72.936	Cynoglossus_semilaevis
ENSEASG00005012012	SFPQ	60	70.023	ENSCVAG00000019538	sfpq	64	66.901	Cyprinodon_variegatus
ENSEASG00005012012	SFPQ	86	59.059	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSEASG00005012012	SFPQ	100	97.046	ENSDNOG00000049454	SFPQ	100	97.046	Dasypus_novemcinctus
ENSEASG00005012012	SFPQ	100	97.320	ENSDORG00000008109	Sfpq	100	97.320	Dipodomys_ordii
ENSEASG00005012012	SFPQ	69	92.807	ENSETEG00000001095	SFPQ	61	92.807	Echinops_telfairi
ENSEASG00005012012	SFPQ	100	100.000	ENSECAG00000000642	SFPQ	100	100.000	Equus_caballus
ENSEASG00005012012	SFPQ	61	72.917	ENSELUG00000023145	sfpq	66	71.462	Esox_lucius
ENSEASG00005012012	SFPQ	100	98.307	ENSFCAG00000042862	SFPQ	100	98.307	Felis_catus
ENSEASG00005012012	SFPQ	50	94.587	ENSFALG00000000731	SFPQ	100	94.587	Ficedula_albicollis
ENSEASG00005012012	SFPQ	50	90.598	ENSFDAG00000017723	-	100	90.935	Fukomys_damarensis
ENSEASG00005012012	SFPQ	61	67.051	ENSFHEG00000015200	sfpq	56	68.966	Fundulus_heteroclitus
ENSEASG00005012012	SFPQ	61	74.943	ENSGMOG00000011950	SFPQ	74	75.000	Gadus_morhua
ENSEASG00005012012	SFPQ	61	73.782	ENSGMOG00000011957	sfpq	65	73.782	Gadus_morhua
ENSEASG00005012012	SFPQ	62	94.292	ENSGALG00000002514	SFPQ	68	94.292	Gallus_gallus
ENSEASG00005012012	SFPQ	98	50.970	ENSGAFG00000014571	sfpq	57	77.914	Gambusia_affinis
ENSEASG00005012012	SFPQ	78	64.695	ENSGACG00000002034	sfpq	68	74.654	Gasterosteus_aculeatus
ENSEASG00005012012	SFPQ	75	99.538	ENSGGOG00000026354	SFPQ	100	100.000	Gorilla_gorilla
ENSEASG00005012012	SFPQ	63	72.973	ENSHBUG00000016818	sfpq	63	73.529	Haplochromis_burtoni
ENSEASG00005012012	SFPQ	100	95.499	ENSHGLG00000012001	SFPQ	100	95.499	Heterocephalus_glaber_female
ENSEASG00005012012	SFPQ	50	100.000	ENSHGLG00100004136	-	100	100.000	Heterocephalus_glaber_male
ENSEASG00005012012	SFPQ	63	73.214	ENSHCOG00000008612	sfpq	58	72.912	Hippocampus_comes
ENSEASG00005012012	SFPQ	63	70.000	ENSIPUG00000013076	SFPQ	73	72.769	Ictalurus_punctatus
ENSEASG00005012012	SFPQ	50	100.000	ENSSTOG00000014004	-	100	100.000	Ictidomys_tridecemlineatus
ENSEASG00005012012	SFPQ	68	99.380	ENSJJAG00000015633	Sfpq	69	99.380	Jaculus_jaculus
ENSEASG00005012012	SFPQ	90	54.818	ENSKMAG00000000238	sfpq	54	70.805	Kryptolebias_marmoratus
ENSEASG00005012012	SFPQ	61	76.027	ENSLACG00000014728	SFPQ	70	80.093	Latimeria_chalumnae
ENSEASG00005012012	SFPQ	89	61.455	ENSLOCG00000001067	sfpq	69	80.711	Lepisosteus_oculatus
ENSEASG00005012012	SFPQ	97	89.359	ENSLAFG00000015951	SFPQ	100	89.359	Loxodonta_africana
ENSEASG00005012012	SFPQ	100	96.914	ENSMFAG00000000797	SFPQ	100	96.914	Macaca_fascicularis
ENSEASG00005012012	SFPQ	100	96.774	ENSMMUG00000019154	SFPQ	100	96.774	Macaca_mulatta
ENSEASG00005012012	SFPQ	100	97.055	ENSMNEG00000038895	SFPQ	100	97.055	Macaca_nemestrina
ENSEASG00005012012	SFPQ	50	96.866	ENSMLEG00000010643	-	100	96.866	Mandrillus_leucophaeus
ENSEASG00005012012	SFPQ	77	67.151	ENSMAMG00000007875	sfpq	66	77.726	Mastacembelus_armatus
ENSEASG00005012012	SFPQ	63	72.973	ENSMZEG00005026091	sfpq	64	73.529	Maylandia_zebra
ENSEASG00005012012	SFPQ	54	91.049	ENSMGAG00000004237	SFPQ	100	91.049	Meleagris_gallopavo
ENSEASG00005012012	SFPQ	68	98.745	ENSMAUG00000006402	Sfpq	69	98.140	Mesocricetus_auratus
ENSEASG00005012012	SFPQ	100	96.910	ENSMICG00000027265	SFPQ	100	96.910	Microcebus_murinus
ENSEASG00005012012	SFPQ	68	95.021	ENSMOCG00000019075	Sfpq	99	95.021	Microtus_ochrogaster
ENSEASG00005012012	SFPQ	100	55.494	ENSMMOG00000001074	sfpq	65	74.419	Mola_mola
ENSEASG00005012012	SFPQ	63	96.188	ENSMODG00000017937	SFPQ	65	96.372	Monodelphis_domestica
ENSEASG00005012012	SFPQ	58	76.166	ENSMALG00000010381	sfpq	64	75.389	Monopterus_albus
ENSEASG00005012012	SFPQ	96	91.189	MGP_CAROLIEiJ_G0026487	Sfpq	80	94.840	Mus_caroli
ENSEASG00005012012	SFPQ	84	94.975	MGP_PahariEiJ_G0028818	Sfpq	79	94.565	Mus_pahari
ENSEASG00005012012	SFPQ	64	97.111	ENSMLUG00000027090	SFPQ	100	97.111	Myotis_lucifugus
ENSEASG00005012012	SFPQ	68	98.763	ENSNGAG00000000888	Sfpq	69	98.351	Nannospalax_galili
ENSEASG00005012012	SFPQ	98	55.603	ENSNBRG00000017479	sfpq	64	73.756	Neolamprologus_brichardi
ENSEASG00005012012	SFPQ	50	100.000	ENSNLEG00000035521	-	100	100.000	Nomascus_leucogenys
ENSEASG00005012012	SFPQ	67	95.556	ENSMEUG00000014082	SFPQ	64	95.556	Notamacropus_eugenii
ENSEASG00005012012	SFPQ	72	94.094	ENSOPRG00000013696	SFPQ	62	99.772	Ochotona_princeps
ENSEASG00005012012	SFPQ	65	87.879	ENSODEG00000005485	SFPQ	86	87.021	Octodon_degus
ENSEASG00005012012	SFPQ	63	74.099	ENSONIG00000017737	sfpq	57	80.601	Oreochromis_niloticus
ENSEASG00005012012	SFPQ	50	97.436	ENSOANG00000008789	-	100	97.436	Ornithorhynchus_anatinus
ENSEASG00005012012	SFPQ	72	89.768	ENSOCUG00000001877	SFPQ	86	100.000	Oryctolagus_cuniculus
ENSEASG00005012012	SFPQ	87	58.637	ENSORLG00000007459	sfpq	57	72.158	Oryzias_latipes
ENSEASG00005012012	SFPQ	86	59.003	ENSORLG00020011818	sfpq	57	72.158	Oryzias_latipes_hni
ENSEASG00005012012	SFPQ	87	56.902	ENSORLG00015002131	sfpq	58	71.494	Oryzias_latipes_hsok
ENSEASG00005012012	SFPQ	87	53.693	ENSOMEG00000018020	sfpq	55	73.028	Oryzias_melastigma
ENSEASG00005012012	SFPQ	75	98.110	ENSOGAG00000027710	SFPQ	100	98.110	Otolemur_garnettii
ENSEASG00005012012	SFPQ	68	99.769	ENSOARG00000019439	SFPQ	66	99.769	Ovis_aries
ENSEASG00005012012	SFPQ	50	99.716	ENSPPRG00000015478	-	100	99.716	Panthera_pardus
ENSEASG00005012012	SFPQ	50	100.000	ENSPTIG00000007710	-	100	100.000	Panthera_tigris_altaica
ENSEASG00005012012	SFPQ	68	93.802	ENSPTRG00000000518	SFPQ	67	93.802	Pan_troglodytes
ENSEASG00005012012	SFPQ	61	76.798	ENSPKIG00000023035	sfpq	73	79.263	Paramormyrops_kingsleyae
ENSEASG00005012012	SFPQ	61	94.664	ENSPSIG00000011494	SFPQ	100	94.664	Pelodiscus_sinensis
ENSEASG00005012012	SFPQ	60	69.014	ENSPMGG00000023883	sfpq	58	81.115	Periophthalmus_magnuspinnatus
ENSEASG00005012012	SFPQ	67	98.726	ENSPEMG00000009794	Sfpq	97	98.726	Peromyscus_maniculatus_bairdii
ENSEASG00005012012	SFPQ	63	95.964	ENSPCIG00000000923	SFPQ	70	92.449	Phascolarctos_cinereus
ENSEASG00005012012	SFPQ	81	58.394	ENSPFOG00000003127	sfpq	71	68.591	Poecilia_formosa
ENSEASG00005012012	SFPQ	90	52.968	ENSPREG00000008060	sfpq	59	69.444	Poecilia_reticulata
ENSEASG00005012012	SFPQ	100	97.055	ENSPPYG00000001560	SFPQ	100	97.055	Pongo_abelii
ENSEASG00005012012	SFPQ	77	98.834	ENSPCAG00000006164	SFPQ	77	98.834	Procavia_capensis
ENSEASG00005012012	SFPQ	100	97.191	ENSPCOG00000027127	SFPQ	100	97.191	Propithecus_coquereli
ENSEASG00005012012	SFPQ	100	95.904	ENSPVAG00000001865	SFPQ	100	95.904	Pteropus_vampyrus
ENSEASG00005012012	SFPQ	63	72.973	ENSPNYG00000007494	sfpq	62	73.303	Pundamilia_nyererei
ENSEASG00005012012	SFPQ	74	64.706	ENSPNAG00000002128	sfpq	73	73.198	Pygocentrus_nattereri
ENSEASG00005012012	SFPQ	68	98.954	ENSRNOG00000058461	Sfpq	70	98.347	Rattus_norvegicus
ENSEASG00005012012	SFPQ	99	72.805	ENSRBIG00000035286	SFPQ	100	100.000	Rhinopithecus_bieti
ENSEASG00005012012	SFPQ	68	100.000	ENSRROG00000040992	SFPQ	100	100.000	Rhinopithecus_roxellana
ENSEASG00005012012	SFPQ	50	100.000	ENSSBOG00000024972	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSEASG00005012012	SFPQ	58	95.607	ENSSHAG00000016107	-	97	90.200	Sarcophilus_harrisii
ENSEASG00005012012	SFPQ	50	91.453	ENSSHAG00000012312	-	100	90.883	Sarcophilus_harrisii
ENSEASG00005012012	SFPQ	69	70.431	ENSSFOG00015009289	sfpq	79	78.005	Scleropages_formosus
ENSEASG00005012012	SFPQ	61	77.083	ENSSMAG00000018201	sfpq	66	73.756	Scophthalmus_maximus
ENSEASG00005012012	SFPQ	61	76.389	ENSSDUG00000008402	sfpq	65	78.291	Seriola_dumerili
ENSEASG00005012012	SFPQ	74	67.433	ENSSLDG00000018917	sfpq	65	78.291	Seriola_lalandi_dorsalis
ENSEASG00005012012	SFPQ	52	100.000	ENSSARG00000006409	SFPQ	100	100.000	Sorex_araneus
ENSEASG00005012012	SFPQ	64	71.274	ENSSPAG00000016550	sfpq	64	74.830	Stegastes_partitus
ENSEASG00005012012	SFPQ	100	97.602	ENSSSCG00000035690	SFPQ	100	97.602	Sus_scrofa
ENSEASG00005012012	SFPQ	61	94.896	ENSTGUG00000001722	SFPQ	100	94.896	Taeniopygia_guttata
ENSEASG00005012012	SFPQ	88	55.745	ENSTRUG00000003783	sfpq	62	76.092	Takifugu_rubripes
ENSEASG00005012012	SFPQ	62	76.484	ENSTNIG00000011331	sfpq	72	76.027	Tetraodon_nigroviridis
ENSEASG00005012012	SFPQ	85	95.159	ENSTTRG00000013930	SFPQ	85	94.157	Tursiops_truncatus
ENSEASG00005012012	SFPQ	58	98.701	ENSUAMG00000026758	SFPQ	100	98.701	Ursus_americanus
ENSEASG00005012012	SFPQ	50	97.151	ENSUMAG00000008056	-	100	97.151	Ursus_maritimus
ENSEASG00005012012	SFPQ	66	90.315	ENSVPAG00000006960	-	67	90.315	Vicugna_pacos
ENSEASG00005012012	SFPQ	50	88.889	ENSVVUG00000000874	-	100	88.889	Vulpes_vulpes
ENSEASG00005012012	SFPQ	64	80.172	ENSXETG00000009682	sfpq	100	85.139	Xenopus_tropicalis