EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005012021 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 16339 bases
Position: chrPSZQ01001725.1:16745933-16762271
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005017358	zf-U11-48K	PF05253.12	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005018858	SNRNP48-201	1020	-	ENSEASP00005017358	339 (aa)	-	UPI00071A8B73

Gene Model

Click here to download ENSEASG00005012021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005012021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005012021	SNRNP48	100	92.330	ENSG00000168566	SNRNP48	99	92.604	Homo_sapiens
ENSEASG00005012021	SNRNP48	81	46.831	ENSAPOG00000021430	snrnp48	83	46.897	Acanthochromis_polyacanthus
ENSEASG00005012021	SNRNP48	99	91.354	ENSAMEG00000017349	SNRNP48	100	91.354	Ailuropoda_melanoleuca
ENSEASG00005012021	SNRNP48	88	46.382	ENSACIG00000002032	snrnp48	83	46.853	Amphilophus_citrinellus
ENSEASG00005012021	SNRNP48	81	47.535	ENSAOCG00000010562	snrnp48	83	47.241	Amphiprion_ocellaris
ENSEASG00005012021	SNRNP48	81	47.163	ENSAPEG00000003231	snrnp48	83	46.875	Amphiprion_percula
ENSEASG00005012021	SNRNP48	78	49.275	ENSATEG00000020210	snrnp48	82	48.944	Anabas_testudineus
ENSEASG00005012021	SNRNP48	83	63.014	ENSACAG00000002811	SNRNP48	90	63.014	Anolis_carolinensis
ENSEASG00005012021	SNRNP48	100	91.740	ENSANAG00000033538	SNRNP48	99	92.012	Aotus_nancymaae
ENSEASG00005012021	SNRNP48	94	44.923	ENSAMXG00000015309	snrnp48	85	47.222	Astyanax_mexicanus
ENSEASG00005012021	SNRNP48	99	87.906	ENSBTAG00000001123	SNRNP48	99	89.086	Bos_taurus
ENSEASG00005012021	SNRNP48	99	92.308	ENSCJAG00000021330	SNRNP48	99	92.308	Callithrix_jacchus
ENSEASG00005012021	SNRNP48	99	93.731	ENSCAFG00000009574	SNRNP48	83	93.731	Canis_familiaris
ENSEASG00005012021	SNRNP48	99	93.750	ENSCAFG00020013203	SNRNP48	99	94.030	Canis_lupus_dingo
ENSEASG00005012021	SNRNP48	99	89.381	ENSCHIG00000015216	SNRNP48	99	90.560	Capra_hircus
ENSEASG00005012021	SNRNP48	99	90.237	ENSTSYG00000000698	SNRNP48	99	90.237	Carlito_syrichta
ENSEASG00005012021	SNRNP48	91	85.065	ENSCAPG00000006768	SNRNP48	99	85.342	Cavia_aperea
ENSEASG00005012021	SNRNP48	99	88.757	ENSCPOG00000007910	SNRNP48	99	88.757	Cavia_porcellus
ENSEASG00005012021	SNRNP48	99	90.828	ENSCCAG00000035652	SNRNP48	99	90.828	Cebus_capucinus
ENSEASG00005012021	SNRNP48	100	91.740	ENSCATG00000033947	SNRNP48	99	92.012	Cercocebus_atys
ENSEASG00005012021	SNRNP48	99	89.053	ENSCLAG00000003765	SNRNP48	99	89.053	Chinchilla_lanigera
ENSEASG00005012021	SNRNP48	100	92.330	ENSCSAG00000007409	SNRNP48	99	92.604	Chlorocebus_sabaeus
ENSEASG00005012021	SNRNP48	85	63.576	ENSCPBG00000019146	SNRNP48	92	63.576	Chrysemys_picta_bellii
ENSEASG00005012021	SNRNP48	86	30.225	ENSCING00000004121	-	67	32.618	Ciona_intestinalis
ENSEASG00005012021	SNRNP48	100	92.330	ENSCANG00000030017	SNRNP48	99	92.604	Colobus_angolensis_palliatus
ENSEASG00005012021	SNRNP48	99	88.166	ENSCGRG00001001076	-	99	87.870	Cricetulus_griseus_chok1gshd
ENSEASG00005012021	SNRNP48	99	69.254	ENSCGRG00001008805	-	95	68.657	Cricetulus_griseus_chok1gshd
ENSEASG00005012021	SNRNP48	99	88.166	ENSCGRG00000007781	Snrnp48	99	87.870	Cricetulus_griseus_crigri
ENSEASG00005012021	SNRNP48	77	49.049	ENSCSEG00000000722	snrnp48	72	49.049	Cynoglossus_semilaevis
ENSEASG00005012021	SNRNP48	88	44.660	ENSCVAG00000019829	snrnp48	73	45.517	Cyprinodon_variegatus
ENSEASG00005012021	SNRNP48	81	45.423	ENSDARG00000039989	snrnp48	83	44.138	Danio_rerio
ENSEASG00005012021	SNRNP48	99	91.642	ENSDNOG00000014978	SNRNP48	98	91.916	Dasypus_novemcinctus
ENSEASG00005012021	SNRNP48	100	88.235	ENSDORG00000015140	Snrnp48	100	88.235	Dipodomys_ordii
ENSEASG00005012021	SNRNP48	99	99.408	ENSECAG00000026937	SNRNP48	99	99.408	Equus_caballus
ENSEASG00005012021	SNRNP48	100	70.588	ENSEEUG00000015437	SNRNP48	99	70.294	Erinaceus_europaeus
ENSEASG00005012021	SNRNP48	87	47.195	ENSELUG00000009766	snrnp48	77	48.043	Esox_lucius
ENSEASG00005012021	SNRNP48	100	94.395	ENSFCAG00000018853	SNRNP48	99	94.675	Felis_catus
ENSEASG00005012021	SNRNP48	83	64.384	ENSFALG00000007797	SNRNP48	93	64.384	Ficedula_albicollis
ENSEASG00005012021	SNRNP48	100	88.791	ENSFDAG00000009231	SNRNP48	100	88.791	Fukomys_damarensis
ENSEASG00005012021	SNRNP48	59	54.950	ENSFHEG00000014647	snrnp48	82	51.261	Fundulus_heteroclitus
ENSEASG00005012021	SNRNP48	73	47.177	ENSGMOG00000018599	-	87	45.804	Gadus_morhua
ENSEASG00005012021	SNRNP48	82	62.718	ENSGALG00000013005	SNRNP48	85	65.737	Gallus_gallus
ENSEASG00005012021	SNRNP48	74	50.000	ENSGAFG00000021639	snrnp48	80	47.163	Gambusia_affinis
ENSEASG00005012021	SNRNP48	72	50.407	ENSGACG00000017756	-	84	47.766	Gasterosteus_aculeatus
ENSEASG00005012021	SNRNP48	84	63.333	ENSGAGG00000000865	SNRNP48	97	63.333	Gopherus_agassizii
ENSEASG00005012021	SNRNP48	100	92.330	ENSGGOG00000013220	SNRNP48	99	92.604	Gorilla_gorilla
ENSEASG00005012021	SNRNP48	74	46.875	ENSHBUG00000017066	snrnp48	82	44.983	Haplochromis_burtoni
ENSEASG00005012021	SNRNP48	100	90.265	ENSHGLG00000015241	SNRNP48	100	90.265	Heterocephalus_glaber_female
ENSEASG00005012021	SNRNP48	100	90.265	ENSHGLG00100010027	SNRNP48	100	90.265	Heterocephalus_glaber_male
ENSEASG00005012021	SNRNP48	72	47.561	ENSHCOG00000014066	snrnp48	81	45.804	Hippocampus_comes
ENSEASG00005012021	SNRNP48	100	92.920	ENSSTOG00000014635	SNRNP48	99	93.195	Ictidomys_tridecemlineatus
ENSEASG00005012021	SNRNP48	99	85.207	ENSJJAG00000011495	Snrnp48	99	85.207	Jaculus_jaculus
ENSEASG00005012021	SNRNP48	85	47.603	ENSKMAG00000016514	snrnp48	79	47.826	Kryptolebias_marmoratus
ENSEASG00005012021	SNRNP48	75	49.609	ENSLBEG00000026249	snrnp48	93	43.544	Labrus_bergylta
ENSEASG00005012021	SNRNP48	95	53.939	ENSLACG00000003958	SNRNP48	98	52.187	Latimeria_chalumnae
ENSEASG00005012021	SNRNP48	86	48.505	ENSLOCG00000004187	snrnp48	99	47.278	Lepisosteus_oculatus
ENSEASG00005012021	SNRNP48	100	88.496	ENSLAFG00000011152	SNRNP48	99	88.757	Loxodonta_africana
ENSEASG00005012021	SNRNP48	100	92.625	ENSMFAG00000045216	SNRNP48	99	92.899	Macaca_fascicularis
ENSEASG00005012021	SNRNP48	100	92.625	ENSMMUG00000014785	SNRNP48	99	92.899	Macaca_mulatta
ENSEASG00005012021	SNRNP48	100	92.330	ENSMNEG00000042269	SNRNP48	99	92.604	Macaca_nemestrina
ENSEASG00005012021	SNRNP48	100	92.625	ENSMLEG00000034004	SNRNP48	99	92.899	Mandrillus_leucophaeus
ENSEASG00005012021	SNRNP48	76	47.510	ENSMAMG00000018673	snrnp48	71	47.331	Mastacembelus_armatus
ENSEASG00005012021	SNRNP48	83	63.605	ENSMGAG00000006037	SNRNP48	99	63.356	Meleagris_gallopavo
ENSEASG00005012021	SNRNP48	100	88.496	ENSMAUG00000011944	Snrnp48	99	88.462	Mesocricetus_auratus
ENSEASG00005012021	SNRNP48	100	90.855	ENSMICG00000012497	SNRNP48	99	91.124	Microcebus_murinus
ENSEASG00005012021	SNRNP48	99	87.870	ENSMOCG00000015555	Snrnp48	99	87.574	Microtus_ochrogaster
ENSEASG00005012021	SNRNP48	54	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSEASG00005012021	SNRNP48	99	70.145	ENSMODG00000009996	SNRNP48	93	70.145	Monodelphis_domestica
ENSEASG00005012021	SNRNP48	73	52.209	ENSMALG00000005725	snrnp48	79	49.638	Monopterus_albus
ENSEASG00005012021	SNRNP48	99	87.574	MGP_CAROLIEiJ_G0018441	Snrnp48	99	87.574	Mus_caroli
ENSEASG00005012021	SNRNP48	99	87.278	ENSMUSG00000021431	Snrnp48	99	87.278	Mus_musculus
ENSEASG00005012021	SNRNP48	99	86.686	MGP_PahariEiJ_G0019509	Snrnp48	99	86.686	Mus_pahari
ENSEASG00005012021	SNRNP48	99	86.686	MGP_SPRETEiJ_G0019321	Snrnp48	99	86.686	Mus_spretus
ENSEASG00005012021	SNRNP48	99	87.278	ENSNGAG00000004849	Snrnp48	99	87.278	Nannospalax_galili
ENSEASG00005012021	SNRNP48	74	46.094	ENSNBRG00000012127	snrnp48	82	44.291	Neolamprologus_brichardi
ENSEASG00005012021	SNRNP48	100	92.625	ENSNLEG00000011667	SNRNP48	99	92.899	Nomascus_leucogenys
ENSEASG00005012021	SNRNP48	95	78.019	ENSOPRG00000015471	SNRNP48	100	77.709	Ochotona_princeps
ENSEASG00005012021	SNRNP48	97	42.730	ENSONIG00000001520	snrnp48	95	39.943	Oreochromis_niloticus
ENSEASG00005012021	SNRNP48	57	64.423	ENSOANG00000019888	-	100	65.385	Ornithorhynchus_anatinus
ENSEASG00005012021	SNRNP48	84	89.510	ENSOCUG00000005168	SNRNP48	100	88.487	Oryctolagus_cuniculus
ENSEASG00005012021	SNRNP48	89	46.278	ENSORLG00000015654	snrnp48	82	47.079	Oryzias_latipes
ENSEASG00005012021	SNRNP48	89	44.984	ENSORLG00020015976	snrnp48	70	46.048	Oryzias_latipes_hni
ENSEASG00005012021	SNRNP48	89	45.955	ENSORLG00015022379	snrnp48	71	47.079	Oryzias_latipes_hsok
ENSEASG00005012021	SNRNP48	97	42.353	ENSOMEG00000022007	snrnp48	95	42.029	Oryzias_melastigma
ENSEASG00005012021	SNRNP48	92	90.997	ENSOGAG00000005275	SNRNP48	96	91.167	Otolemur_garnettii
ENSEASG00005012021	SNRNP48	84	89.510	ENSOARG00000017319	SNRNP48	99	89.510	Ovis_aries
ENSEASG00005012021	SNRNP48	100	92.625	ENSPPAG00000032873	SNRNP48	99	92.899	Pan_paniscus
ENSEASG00005012021	SNRNP48	100	94.690	ENSPPRG00000004283	SNRNP48	99	94.970	Panthera_pardus
ENSEASG00005012021	SNRNP48	85	95.470	ENSPTIG00000013502	SNRNP48	99	95.804	Panthera_tigris_altaica
ENSEASG00005012021	SNRNP48	100	92.625	ENSPTRG00000017703	SNRNP48	99	92.899	Pan_troglodytes
ENSEASG00005012021	SNRNP48	100	92.625	ENSPANG00000000771	SNRNP48	99	92.899	Papio_anubis
ENSEASG00005012021	SNRNP48	94	46.291	ENSPKIG00000013703	snrnp48	59	50.000	Paramormyrops_kingsleyae
ENSEASG00005012021	SNRNP48	84	62.458	ENSPSIG00000002213	SNRNP48	94	62.458	Pelodiscus_sinensis
ENSEASG00005012021	SNRNP48	76	47.328	ENSPMGG00000008120	snrnp48	91	47.328	Periophthalmus_magnuspinnatus
ENSEASG00005012021	SNRNP48	100	88.201	ENSPEMG00000008872	Snrnp48	99	88.166	Peromyscus_maniculatus_bairdii
ENSEASG00005012021	SNRNP48	73	51.793	ENSPFOG00000003578	snrnp48	80	47.872	Poecilia_formosa
ENSEASG00005012021	SNRNP48	67	50.655	ENSPLAG00000002290	snrnp48	77	50.655	Poecilia_latipinna
ENSEASG00005012021	SNRNP48	73	50.996	ENSPMEG00000018033	snrnp48	80	47.163	Poecilia_mexicana
ENSEASG00005012021	SNRNP48	72	51.220	ENSPREG00000018541	snrnp48	80	48.582	Poecilia_reticulata
ENSEASG00005012021	SNRNP48	100	91.150	ENSPPYG00000016209	SNRNP48	99	91.420	Pongo_abelii
ENSEASG00005012021	SNRNP48	79	72.285	ENSPCAG00000011991	SNRNP48	99	72.285	Procavia_capensis
ENSEASG00005012021	SNRNP48	100	91.740	ENSPVAG00000002854	SNRNP48	100	91.740	Pteropus_vampyrus
ENSEASG00005012021	SNRNP48	74	47.266	ENSPNYG00000015399	snrnp48	90	45.329	Pundamilia_nyererei
ENSEASG00005012021	SNRNP48	99	88.166	ENSRNOG00000013756	Snrnp48	99	88.166	Rattus_norvegicus
ENSEASG00005012021	SNRNP48	91	92.581	ENSRBIG00000043856	SNRNP48	97	93.092	Rhinopithecus_bieti
ENSEASG00005012021	SNRNP48	100	92.330	ENSRROG00000043229	SNRNP48	99	92.604	Rhinopithecus_roxellana
ENSEASG00005012021	SNRNP48	99	92.012	ENSSBOG00000019486	SNRNP48	99	92.012	Saimiri_boliviensis_boliviensis
ENSEASG00005012021	SNRNP48	98	70.640	ENSSHAG00000014483	SNRNP48	99	70.640	Sarcophilus_harrisii
ENSEASG00005012021	SNRNP48	73	50.598	ENSSFOG00015006610	snrnp48	69	48.299	Scleropages_formosus
ENSEASG00005012021	SNRNP48	98	42.687	ENSSDUG00000014953	snrnp48	96	41.228	Seriola_dumerili
ENSEASG00005012021	SNRNP48	98	43.363	ENSSLDG00000005989	snrnp48	96	41.499	Seriola_lalandi_dorsalis
ENSEASG00005012021	SNRNP48	84	64.094	ENSSPUG00000006257	SNRNP48	85	64.094	Sphenodon_punctatus
ENSEASG00005012021	SNRNP48	78	48.175	ENSSPAG00000006454	snrnp48	80	47.857	Stegastes_partitus
ENSEASG00005012021	SNRNP48	83	62.887	ENSTGUG00000007575	SNRNP48	93	62.887	Taeniopygia_guttata
ENSEASG00005012021	SNRNP48	73	49.801	ENSTRUG00000007031	snrnp48	82	48.582	Takifugu_rubripes
ENSEASG00005012021	SNRNP48	91	42.173	ENSTNIG00000012977	-	76	45.914	Tetraodon_nigroviridis
ENSEASG00005012021	SNRNP48	100	73.746	ENSTBEG00000015620	SNRNP48	99	73.964	Tupaia_belangeri
ENSEASG00005012021	SNRNP48	100	91.740	ENSTTRG00000016715	SNRNP48	99	92.012	Tursiops_truncatus
ENSEASG00005012021	SNRNP48	100	94.100	ENSUAMG00000003690	SNRNP48	99	94.379	Ursus_americanus
ENSEASG00005012021	SNRNP48	85	89.547	ENSVPAG00000003557	SNRNP48	99	89.860	Vicugna_pacos
ENSEASG00005012021	SNRNP48	99	93.155	ENSVVUG00000004996	SNRNP48	99	93.433	Vulpes_vulpes
ENSEASG00005012021	SNRNP48	86	51.007	ENSXETG00000020447	snrnp48	97	48.225	Xenopus_tropicalis
ENSEASG00005012021	SNRNP48	67	50.000	ENSXCOG00000004478	snrnp48	69	50.000	Xiphophorus_couchianus
ENSEASG00005012021	SNRNP48	82	49.104	ENSXMAG00000013595	snrnp48	81	44.479	Xiphophorus_maculatus