EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005012194 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrPSZQ01004664.1:8597237-8597608
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005017626	LSM	PF01423.22	3.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005019141	LSM10-201	372	-	ENSEASP00005017626	123 (aa)	-	UPI00071A3688

Gene Model

Click here to download ENSEASG00005012194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005012194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005012194	LSM10	55	30.000	ENSEASG00005015670	LSM2	59	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005012194	LSM10	100	91.057	ENSG00000181817	LSM10	100	91.057	Homo_sapiens
ENSEASG00005012194	LSM10	100	96.748	ENSAMEG00000019854	LSM10	100	96.748	Ailuropoda_melanoleuca
ENSEASG00005012194	LSM10	94	68.103	ENSACIG00000015420	oscp1a	77	68.103	Amphilophus_citrinellus
ENSEASG00005012194	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSEASG00005012194	LSM10	96	68.644	ENSAOCG00000015618	LSM10	98	68.644	Amphiprion_ocellaris
ENSEASG00005012194	LSM10	96	68.644	ENSAOCG00000014654	-	98	68.644	Amphiprion_ocellaris
ENSEASG00005012194	LSM10	96	68.644	ENSAPEG00000021845	-	98	68.644	Amphiprion_percula
ENSEASG00005012194	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSEASG00005012194	LSM10	94	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSEASG00005012194	LSM10	100	68.293	ENSACAG00000001231	LSM10	100	68.293	Anolis_carolinensis
ENSEASG00005012194	LSM10	100	91.870	ENSANAG00000018759	-	100	91.870	Aotus_nancymaae
ENSEASG00005012194	LSM10	98	91.667	ENSANAG00000031489	-	98	91.667	Aotus_nancymaae
ENSEASG00005012194	LSM10	96	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSEASG00005012194	LSM10	96	68.644	ENSAMXG00000025301	oscp1a	98	68.644	Astyanax_mexicanus
ENSEASG00005012194	LSM10	98	93.333	ENSBTAG00000024096	LSM10	98	93.333	Bos_taurus
ENSEASG00005012194	LSM10	100	91.057	ENSCJAG00000044880	LSM10	100	91.057	Callithrix_jacchus
ENSEASG00005012194	LSM10	100	98.374	ENSCAFG00000003382	LSM10	100	98.374	Canis_familiaris
ENSEASG00005012194	LSM10	100	98.374	ENSCAFG00020008920	LSM10	100	98.374	Canis_lupus_dingo
ENSEASG00005012194	LSM10	98	93.333	ENSCHIG00000009398	LSM10	98	93.333	Capra_hircus
ENSEASG00005012194	LSM10	100	91.870	ENSCAPG00000012567	LSM10	100	91.870	Cavia_aperea
ENSEASG00005012194	LSM10	100	91.870	ENSCPOG00000039302	LSM10	100	91.870	Cavia_porcellus
ENSEASG00005012194	LSM10	100	91.870	ENSCCAG00000018913	-	100	91.870	Cebus_capucinus
ENSEASG00005012194	LSM10	98	91.667	ENSCCAG00000008378	-	98	91.667	Cebus_capucinus
ENSEASG00005012194	LSM10	100	91.870	ENSCATG00000006589	LSM10	100	91.870	Cercocebus_atys
ENSEASG00005012194	LSM10	100	94.309	ENSCLAG00000008633	LSM10	100	94.309	Chinchilla_lanigera
ENSEASG00005012194	LSM10	100	91.870	ENSCSAG00000000134	LSM10	100	91.870	Chlorocebus_sabaeus
ENSEASG00005012194	LSM10	100	91.200	ENSCHOG00000008615	LSM10	100	91.200	Choloepus_hoffmanni
ENSEASG00005012194	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSEASG00005012194	LSM10	100	91.870	ENSCANG00000019928	LSM10	100	91.870	Colobus_angolensis_palliatus
ENSEASG00005012194	LSM10	93	85.470	ENSCGRG00001022673	-	94	85.470	Cricetulus_griseus_chok1gshd
ENSEASG00005012194	LSM10	98	95.041	ENSCGRG00001004317	-	99	95.041	Cricetulus_griseus_chok1gshd
ENSEASG00005012194	LSM10	93	85.470	ENSCGRG00000015514	-	94	85.470	Cricetulus_griseus_crigri
ENSEASG00005012194	LSM10	98	95.041	ENSCGRG00000014935	-	99	95.041	Cricetulus_griseus_crigri
ENSEASG00005012194	LSM10	96	64.407	ENSCSEG00000010374	oscp1a	79	64.407	Cynoglossus_semilaevis
ENSEASG00005012194	LSM10	97	65.546	ENSCVAG00000001536	oscp1a	90	65.546	Cyprinodon_variegatus
ENSEASG00005012194	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSEASG00005012194	LSM10	98	72.727	ENSDARG00000101222	oscp1a	100	72.727	Danio_rerio
ENSEASG00005012194	LSM10	99	95.902	ENSDNOG00000036662	LSM10	99	95.902	Dasypus_novemcinctus
ENSEASG00005012194	LSM10	100	93.496	ENSDORG00000007579	Lsm10	100	93.496	Dipodomys_ordii
ENSEASG00005012194	LSM10	100	91.870	ENSETEG00000005703	LSM10	100	91.870	Echinops_telfairi
ENSEASG00005012194	LSM10	95	52.137	ENSEBUG00000001312	oscp1a	96	52.137	Eptatretus_burgeri
ENSEASG00005012194	LSM10	100	99.187	ENSECAG00000005071	LSM10	100	99.187	Equus_caballus
ENSEASG00005012194	LSM10	100	94.309	ENSEEUG00000012032	LSM10	100	94.309	Erinaceus_europaeus
ENSEASG00005012194	LSM10	98	68.595	ENSELUG00000007452	oscp1a	99	68.595	Esox_lucius
ENSEASG00005012194	LSM10	100	71.545	ENSFALG00000000851	LSM10	100	71.545	Ficedula_albicollis
ENSEASG00005012194	LSM10	100	92.683	ENSFDAG00000021056	LSM10	100	92.683	Fukomys_damarensis
ENSEASG00005012194	LSM10	89	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSEASG00005012194	LSM10	87	66.355	ENSGMOG00000019832	oscp1a	90	66.355	Gadus_morhua
ENSEASG00005012194	LSM10	100	74.797	ENSGALG00000002127	LSM10	100	74.797	Gallus_gallus
ENSEASG00005012194	LSM10	91	60.870	ENSGAFG00000016445	oscp1a	93	60.870	Gambusia_affinis
ENSEASG00005012194	LSM10	96	64.407	ENSGACG00000002329	oscp1a	97	64.407	Gasterosteus_aculeatus
ENSEASG00005012194	LSM10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSEASG00005012194	LSM10	100	92.683	ENSGGOG00000003556	LSM10	100	92.683	Gorilla_gorilla
ENSEASG00005012194	LSM10	96	66.949	ENSHBUG00000001722	oscp1a	96	66.949	Haplochromis_burtoni
ENSEASG00005012194	LSM10	100	91.870	ENSHGLG00000011625	LSM10	100	91.870	Heterocephalus_glaber_female
ENSEASG00005012194	LSM10	100	91.870	ENSHGLG00100001769	LSM10	100	91.870	Heterocephalus_glaber_male
ENSEASG00005012194	LSM10	85	69.524	ENSIPUG00000005808	oscp1a	91	69.524	Ictalurus_punctatus
ENSEASG00005012194	LSM10	100	95.122	ENSSTOG00000000606	LSM10	100	95.122	Ictidomys_tridecemlineatus
ENSEASG00005012194	LSM10	98	66.116	ENSKMAG00000012143	oscp1a	99	66.116	Kryptolebias_marmoratus
ENSEASG00005012194	LSM10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSEASG00005012194	LSM10	100	75.610	ENSLACG00000015904	LSM10	95	75.610	Latimeria_chalumnae
ENSEASG00005012194	LSM10	98	71.667	ENSLOCG00000018277	oscp1a	98	71.667	Lepisosteus_oculatus
ENSEASG00005012194	LSM10	100	94.309	ENSLAFG00000009600	LSM10	100	94.309	Loxodonta_africana
ENSEASG00005012194	LSM10	100	91.870	ENSMFAG00000009115	LSM10	100	91.870	Macaca_fascicularis
ENSEASG00005012194	LSM10	100	91.870	ENSMMUG00000017338	LSM10	100	91.870	Macaca_mulatta
ENSEASG00005012194	LSM10	100	91.870	ENSMNEG00000020023	LSM10	100	91.870	Macaca_nemestrina
ENSEASG00005012194	LSM10	100	91.870	ENSMLEG00000025150	LSM10	100	91.870	Mandrillus_leucophaeus
ENSEASG00005012194	LSM10	98	65.000	ENSMAMG00000004427	oscp1a	98	65.000	Mastacembelus_armatus
ENSEASG00005012194	LSM10	96	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSEASG00005012194	LSM10	100	73.984	ENSMGAG00000015707	LSM10	100	73.984	Meleagris_gallopavo
ENSEASG00005012194	LSM10	98	92.562	ENSMAUG00000016624	Lsm10	99	92.562	Mesocricetus_auratus
ENSEASG00005012194	LSM10	98	93.388	ENSMOCG00000021943	Lsm10	99	93.388	Microtus_ochrogaster
ENSEASG00005012194	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSEASG00005012194	LSM10	100	84.553	ENSMODG00000023328	LSM10	100	84.553	Monodelphis_domestica
ENSEASG00005012194	LSM10	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSEASG00005012194	LSM10	98	95.041	MGP_CAROLIEiJ_G0026467	Lsm10	100	95.699	Mus_caroli
ENSEASG00005012194	LSM10	98	94.215	ENSMUSG00000050188	Lsm10	100	94.624	Mus_musculus
ENSEASG00005012194	LSM10	98	94.215	MGP_PahariEiJ_G0028798	Lsm10	100	94.624	Mus_pahari
ENSEASG00005012194	LSM10	98	94.215	MGP_SPRETEiJ_G0027446	Lsm10	100	94.624	Mus_spretus
ENSEASG00005012194	LSM10	100	98.374	ENSMPUG00000018593	LSM10	100	98.374	Mustela_putorius_furo
ENSEASG00005012194	LSM10	100	90.244	ENSMLUG00000023895	LSM10	100	90.244	Myotis_lucifugus
ENSEASG00005012194	LSM10	100	94.309	ENSNGAG00000015011	Lsm10	100	94.309	Nannospalax_galili
ENSEASG00005012194	LSM10	96	67.797	ENSNBRG00000014306	oscp1a	96	67.797	Neolamprologus_brichardi
ENSEASG00005012194	LSM10	100	92.683	ENSNLEG00000033754	LSM10	100	92.683	Nomascus_leucogenys
ENSEASG00005012194	LSM10	100	84.553	ENSMEUG00000006313	LSM10	100	84.553	Notamacropus_eugenii
ENSEASG00005012194	LSM10	100	90.244	ENSOPRG00000001699	LSM10	100	90.244	Ochotona_princeps
ENSEASG00005012194	LSM10	100	94.309	ENSODEG00000019161	LSM10	100	94.309	Octodon_degus
ENSEASG00005012194	LSM10	96	67.797	ENSONIG00000020904	oscp1a	97	67.797	Oreochromis_niloticus
ENSEASG00005012194	LSM10	100	78.049	ENSOANG00000002066	LSM10	100	78.049	Ornithorhynchus_anatinus
ENSEASG00005012194	LSM10	100	89.431	ENSOCUG00000005333	LSM10	100	89.431	Oryctolagus_cuniculus
ENSEASG00005012194	LSM10	97	66.387	ENSORLG00000009504	oscp1a	98	66.387	Oryzias_latipes
ENSEASG00005012194	LSM10	97	66.387	ENSORLG00020016201	oscp1a	98	66.387	Oryzias_latipes_hni
ENSEASG00005012194	LSM10	97	66.387	ENSORLG00015007794	oscp1a	98	66.387	Oryzias_latipes_hsok
ENSEASG00005012194	LSM10	100	95.122	ENSOGAG00000002653	LSM10	100	95.122	Otolemur_garnettii
ENSEASG00005012194	LSM10	98	93.333	ENSOARG00000009596	LSM10	98	93.333	Ovis_aries
ENSEASG00005012194	LSM10	100	91.057	ENSPPAG00000023465	LSM10	100	91.057	Pan_paniscus
ENSEASG00005012194	LSM10	100	97.561	ENSPPRG00000014619	LSM10	100	97.561	Panthera_pardus
ENSEASG00005012194	LSM10	100	97.561	ENSPTIG00000004613	LSM10	100	97.561	Panthera_tigris_altaica
ENSEASG00005012194	LSM10	100	91.057	ENSPTRG00000000539	LSM10	100	91.057	Pan_troglodytes
ENSEASG00005012194	LSM10	100	91.870	ENSPANG00000023172	LSM10	100	91.870	Papio_anubis
ENSEASG00005012194	LSM10	98	65.833	ENSPKIG00000003728	oscp1a	97	65.833	Paramormyrops_kingsleyae
ENSEASG00005012194	LSM10	100	73.171	ENSPSIG00000000590	LSM10	100	73.171	Pelodiscus_sinensis
ENSEASG00005012194	LSM10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSEASG00005012194	LSM10	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSEASG00005012194	LSM10	91	67.857	ENSPFOG00000020490	oscp1a	95	67.857	Poecilia_formosa
ENSEASG00005012194	LSM10	91	67.857	ENSPLAG00000016537	oscp1a	85	67.857	Poecilia_latipinna
ENSEASG00005012194	LSM10	88	68.519	ENSPMEG00000000174	oscp1a	94	68.519	Poecilia_mexicana
ENSEASG00005012194	LSM10	91	66.964	ENSPREG00000009899	oscp1a	85	66.964	Poecilia_reticulata
ENSEASG00005012194	LSM10	100	91.870	ENSPPYG00000001539	LSM10	100	91.870	Pongo_abelii
ENSEASG00005012194	LSM10	100	91.057	ENSPCAG00000002520	LSM10	100	91.057	Procavia_capensis
ENSEASG00005012194	LSM10	100	93.496	ENSPVAG00000008644	LSM10	100	93.496	Pteropus_vampyrus
ENSEASG00005012194	LSM10	96	66.949	ENSPNYG00000003138	oscp1a	96	66.949	Pundamilia_nyererei
ENSEASG00005012194	LSM10	95	67.521	ENSPNAG00000028829	oscp1a	97	67.521	Pygocentrus_nattereri
ENSEASG00005012194	LSM10	98	95.041	ENSRNOG00000025716	Lsm10	99	95.041	Rattus_norvegicus
ENSEASG00005012194	LSM10	100	91.870	ENSRBIG00000001561	LSM10	100	91.870	Rhinopithecus_bieti
ENSEASG00005012194	LSM10	100	91.870	ENSRROG00000011414	LSM10	100	91.870	Rhinopithecus_roxellana
ENSEASG00005012194	LSM10	100	91.870	ENSSBOG00000036413	-	100	91.870	Saimiri_boliviensis_boliviensis
ENSEASG00005012194	LSM10	100	83.740	ENSSHAG00000018056	LSM10	100	83.740	Sarcophilus_harrisii
ENSEASG00005012194	LSM10	98	66.942	ENSSFOG00015019954	lsm10	99	66.942	Scleropages_formosus
ENSEASG00005012194	LSM10	93	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSEASG00005012194	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSEASG00005012194	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSEASG00005012194	LSM10	100	92.800	ENSSARG00000004211	LSM10	100	94.400	Sorex_araneus
ENSEASG00005012194	LSM10	94	66.379	ENSSPAG00000009229	oscp1a	96	66.379	Stegastes_partitus
ENSEASG00005012194	LSM10	100	92.683	ENSSSCG00000038916	LSM10	100	92.683	Sus_scrofa
ENSEASG00005012194	LSM10	99	72.131	ENSTGUG00000001600	-	100	72.131	Taeniopygia_guttata
ENSEASG00005012194	LSM10	99	72.131	ENSTGUG00000001602	-	100	72.131	Taeniopygia_guttata
ENSEASG00005012194	LSM10	97	67.227	ENSTRUG00000010531	oscp1a	96	67.227	Takifugu_rubripes
ENSEASG00005012194	LSM10	100	92.683	ENSTBEG00000016674	LSM10	100	92.683	Tupaia_belangeri
ENSEASG00005012194	LSM10	100	97.561	ENSUAMG00000020265	LSM10	100	97.561	Ursus_americanus
ENSEASG00005012194	LSM10	100	97.561	ENSUMAG00000001438	LSM10	57	97.561	Ursus_maritimus
ENSEASG00005012194	LSM10	100	98.374	ENSVVUG00000023209	LSM10	100	98.374	Vulpes_vulpes
ENSEASG00005012194	LSM10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSEASG00005012194	LSM10	96	60.800	ENSXCOG00000018776	oscp1a	79	60.800	Xiphophorus_couchianus
ENSEASG00005012194	LSM10	95	62.500	ENSXMAG00000019963	oscp1a	96	62.500	Xiphophorus_maculatus