EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005012924 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 48497 bases
Position: chrPSZQ01004632.1:2494109-2542605
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005018751	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSEASP00005018750	DND1_DSRM	PF14709.7	1.2e-24	1	1
ENSEASP00005018751	RRM_1	PF00076.22	2.8e-40	1	3
ENSEASP00005018751	RRM_1	PF00076.22	2.8e-40	2	3
ENSEASP00005018751	RRM_1	PF00076.22	2.8e-40	3	3
ENSEASP00005018750	RRM_1	PF00076.22	2.9e-40	1	3
ENSEASP00005018750	RRM_1	PF00076.22	2.9e-40	2	3
ENSEASP00005018750	RRM_1	PF00076.22	2.9e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005020345	A1CF-202	1746	-	ENSEASP00005018751	581 (aa)	-	-
ENSEAST00005020344	A1CF-201	1794	-	ENSEASP00005018750	597 (aa)	-	UPI00071A4DFE

Gene Model

Click here to download ENSEASG00005012924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005012924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005012924	A1CF	53	51.282	ENSEASG00005005231	HNRNPR	50	51.899
ENSEASG00005012924	A1CF	52	51.803	ENSEASG00005005616	SYNCRIP	57	51.385
ENSEASG00005012924	A1CF	74	58.370	ENSEASG00005008443	RBM47	73	58.425
ENSEASG00005012924	A1CF	75	73.571	ENSEASG00005015821	RBM46	78	70.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005012924	A1CF	100	96.482	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSEASG00005012924	A1CF	100	73.388	ENSAPOG00000008259	a1cf	100	73.223	Acanthochromis_polyacanthus
ENSEASG00005012924	A1CF	100	96.482	ENSAMEG00000000523	A1CF	100	96.482	Ailuropoda_melanoleuca
ENSEASG00005012924	A1CF	100	75.733	ENSACIG00000008632	a1cf	100	76.873	Amphilophus_citrinellus
ENSEASG00005012924	A1CF	100	74.062	ENSAOCG00000023744	a1cf	93	86.228	Amphiprion_ocellaris
ENSEASG00005012924	A1CF	100	75.041	ENSAPEG00000009537	a1cf	100	75.693	Amphiprion_percula
ENSEASG00005012924	A1CF	100	76.260	ENSATEG00000013720	a1cf	100	77.398	Anabas_testudineus
ENSEASG00005012924	A1CF	100	88.629	ENSAPLG00000002964	A1CF	100	88.462	Anas_platyrhynchos
ENSEASG00005012924	A1CF	100	83.278	ENSACAG00000015269	A1CF	100	82.943	Anolis_carolinensis
ENSEASG00005012924	A1CF	100	95.645	ENSANAG00000019974	A1CF	100	95.645	Aotus_nancymaae
ENSEASG00005012924	A1CF	100	73.290	ENSACLG00000017428	a1cf	100	75.244	Astatotilapia_calliptera
ENSEASG00005012924	A1CF	100	75.537	ENSAMXG00000018180	a1cf	100	75.537	Astyanax_mexicanus
ENSEASG00005012924	A1CF	100	96.147	ENSBTAG00000021195	A1CF	100	96.715	Bos_taurus
ENSEASG00005012924	A1CF	100	97.320	ENSCJAG00000005045	A1CF	100	97.320	Callithrix_jacchus
ENSEASG00005012924	A1CF	100	96.482	ENSCAFG00000015581	A1CF	100	96.482	Canis_familiaris
ENSEASG00005012924	A1CF	100	96.482	ENSCAFG00020026421	A1CF	100	96.482	Canis_lupus_dingo
ENSEASG00005012924	A1CF	100	96.650	ENSCHIG00000020411	A1CF	100	96.650	Capra_hircus
ENSEASG00005012924	A1CF	99	94.627	ENSTSYG00000001755	A1CF	100	94.858	Carlito_syrichta
ENSEASG00005012924	A1CF	89	94.737	ENSCAPG00000017386	A1CF	90	94.737	Cavia_aperea
ENSEASG00005012924	A1CF	100	95.980	ENSCPOG00000009807	A1CF	100	95.980	Cavia_porcellus
ENSEASG00005012924	A1CF	100	97.152	ENSCCAG00000018168	A1CF	100	97.152	Cebus_capucinus
ENSEASG00005012924	A1CF	100	95.142	ENSCATG00000043715	A1CF	100	95.142	Cercocebus_atys
ENSEASG00005012924	A1CF	100	95.485	ENSCLAG00000010424	A1CF	100	95.318	Chinchilla_lanigera
ENSEASG00005012924	A1CF	100	96.482	ENSCSAG00000007032	A1CF	100	96.482	Chlorocebus_sabaeus
ENSEASG00005012924	A1CF	99	93.717	ENSCHOG00000009089	A1CF	98	91.186	Choloepus_hoffmanni
ENSEASG00005012924	A1CF	100	88.462	ENSCPBG00000026464	A1CF	100	88.294	Chrysemys_picta_bellii
ENSEASG00005012924	A1CF	100	96.650	ENSCANG00000038032	A1CF	100	96.650	Colobus_angolensis_palliatus
ENSEASG00005012924	A1CF	100	94.975	ENSCGRG00001017413	A1cf	100	94.807	Cricetulus_griseus_chok1gshd
ENSEASG00005012924	A1CF	100	94.305	ENSCGRG00000017332	A1cf	100	94.472	Cricetulus_griseus_crigri
ENSEASG00005012924	A1CF	100	75.000	ENSCSEG00000002361	a1cf	100	76.325	Cynoglossus_semilaevis
ENSEASG00005012924	A1CF	100	74.797	ENSCVAG00000010520	a1cf	100	76.260	Cyprinodon_variegatus
ENSEASG00005012924	A1CF	100	77.944	ENSDARG00000002968	a1cf	100	79.104	Danio_rerio
ENSEASG00005012924	A1CF	100	95.645	ENSDNOG00000002829	A1CF	100	95.645	Dasypus_novemcinctus
ENSEASG00005012924	A1CF	81	97.348	ENSETEG00000012527	A1CF	79	97.348	Echinops_telfairi
ENSEASG00005012924	A1CF	100	99.497	ENSECAG00000010424	A1CF	100	99.497	Equus_caballus
ENSEASG00005012924	A1CF	81	82.090	ENSEEUG00000000013	A1CF	97	82.889	Erinaceus_europaeus
ENSEASG00005012924	A1CF	100	78.275	ENSELUG00000003159	a1cf	100	79.104	Esox_lucius
ENSEASG00005012924	A1CF	100	93.635	ENSFCAG00000011179	A1CF	100	93.802	Felis_catus
ENSEASG00005012924	A1CF	100	86.288	ENSFALG00000013183	A1CF	100	86.120	Ficedula_albicollis
ENSEASG00005012924	A1CF	100	93.467	ENSFDAG00000019371	A1CF	100	93.300	Fukomys_damarensis
ENSEASG00005012924	A1CF	100	70.407	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSEASG00005012924	A1CF	100	72.039	ENSGMOG00000018943	a1cf	100	71.875	Gadus_morhua
ENSEASG00005012924	A1CF	97	88.889	ENSGALG00000003765	A1CF	97	88.713	Gallus_gallus
ENSEASG00005012924	A1CF	100	70.115	ENSGAFG00000014868	a1cf	100	70.936	Gambusia_affinis
ENSEASG00005012924	A1CF	100	74.384	ENSGACG00000010241	a1cf	100	74.548	Gasterosteus_aculeatus
ENSEASG00005012924	A1CF	98	87.762	ENSGAGG00000016508	A1CF	98	87.587	Gopherus_agassizii
ENSEASG00005012924	A1CF	100	96.650	ENSGGOG00000009670	A1CF	100	96.650	Gorilla_gorilla
ENSEASG00005012924	A1CF	100	74.756	ENSHBUG00000021959	a1cf	100	76.547	Haplochromis_burtoni
ENSEASG00005012924	A1CF	100	94.975	ENSHGLG00000008955	A1CF	100	95.310	Heterocephalus_glaber_female
ENSEASG00005012924	A1CF	100	94.305	ENSHGLG00100000518	A1CF	100	94.640	Heterocephalus_glaber_male
ENSEASG00005012924	A1CF	100	69.643	ENSHCOG00000017669	a1cf	100	72.447	Hippocampus_comes
ENSEASG00005012924	A1CF	89	83.022	ENSIPUG00000010367	a1cf	95	83.302	Ictalurus_punctatus
ENSEASG00005012924	A1CF	100	77.236	ENSKMAG00000006568	a1cf	100	78.049	Kryptolebias_marmoratus
ENSEASG00005012924	A1CF	99	74.797	ENSLBEG00000020994	a1cf	98	76.268	Labrus_bergylta
ENSEASG00005012924	A1CF	100	81.032	ENSLACG00000008061	A1CF	100	80.865	Latimeria_chalumnae
ENSEASG00005012924	A1CF	100	82.060	ENSLOCG00000006302	a1cf	100	82.060	Lepisosteus_oculatus
ENSEASG00005012924	A1CF	100	95.477	ENSLAFG00000015462	A1CF	100	95.477	Loxodonta_africana
ENSEASG00005012924	A1CF	100	95.477	ENSMFAG00000035948	A1CF	100	95.477	Macaca_fascicularis
ENSEASG00005012924	A1CF	100	95.477	ENSMMUG00000007077	A1CF	100	95.477	Macaca_mulatta
ENSEASG00005012924	A1CF	100	95.142	ENSMNEG00000031454	A1CF	100	95.142	Macaca_nemestrina
ENSEASG00005012924	A1CF	100	96.482	ENSMLEG00000037223	A1CF	100	96.482	Mandrillus_leucophaeus
ENSEASG00005012924	A1CF	100	73.529	ENSMAMG00000010402	a1cf	100	75.530	Mastacembelus_armatus
ENSEASG00005012924	A1CF	100	76.246	ENSMZEG00005013245	a1cf	100	76.910	Maylandia_zebra
ENSEASG00005012924	A1CF	100	88.815	ENSMGAG00000001507	A1CF	100	88.648	Meleagris_gallopavo
ENSEASG00005012924	A1CF	100	94.305	ENSMAUG00000007422	A1cf	100	94.305	Mesocricetus_auratus
ENSEASG00005012924	A1CF	100	94.482	ENSMICG00000003377	A1CF	100	94.482	Microcebus_murinus
ENSEASG00005012924	A1CF	100	94.472	ENSMOCG00000021536	A1cf	100	94.305	Microtus_ochrogaster
ENSEASG00005012924	A1CF	100	67.700	ENSMMOG00000009422	a1cf	100	69.168	Mola_mola
ENSEASG00005012924	A1CF	92	89.617	ENSMODG00000016478	A1CF	97	90.926	Monodelphis_domestica
ENSEASG00005012924	A1CF	100	73.090	ENSMALG00000012992	a1cf	100	72.425	Monopterus_albus
ENSEASG00005012924	A1CF	100	93.467	MGP_CAROLIEiJ_G0022873	A1cf	100	93.132	Mus_caroli
ENSEASG00005012924	A1CF	100	93.467	ENSMUSG00000052595	A1cf	99	96.579	Mus_musculus
ENSEASG00005012924	A1CF	100	92.965	MGP_PahariEiJ_G0014366	A1cf	100	92.295	Mus_pahari
ENSEASG00005012924	A1CF	100	92.965	MGP_SPRETEiJ_G0023792	A1cf	100	92.630	Mus_spretus
ENSEASG00005012924	A1CF	100	90.117	ENSMPUG00000016971	A1CF	100	90.117	Mustela_putorius_furo
ENSEASG00005012924	A1CF	100	96.482	ENSMLUG00000016071	A1CF	100	96.482	Myotis_lucifugus
ENSEASG00005012924	A1CF	100	95.310	ENSNGAG00000015136	A1cf	100	95.142	Nannospalax_galili
ENSEASG00005012924	A1CF	100	75.081	ENSNBRG00000001712	a1cf	100	76.873	Neolamprologus_brichardi
ENSEASG00005012924	A1CF	100	97.655	ENSNLEG00000012028	A1CF	100	97.655	Nomascus_leucogenys
ENSEASG00005012924	A1CF	97	89.027	ENSMEUG00000015909	A1CF	100	89.027	Notamacropus_eugenii
ENSEASG00005012924	A1CF	88	85.143	ENSOPRG00000010667	A1CF	97	85.227	Ochotona_princeps
ENSEASG00005012924	A1CF	100	75.407	ENSONIG00000019105	a1cf	100	76.384	Oreochromis_niloticus
ENSEASG00005012924	A1CF	78	88.651	ENSOANG00000007360	A1CF	99	88.651	Ornithorhynchus_anatinus
ENSEASG00005012924	A1CF	100	94.472	ENSOCUG00000011587	A1CF	100	94.137	Oryctolagus_cuniculus
ENSEASG00005012924	A1CF	100	74.351	ENSORLG00000013342	a1cf	100	74.194	Oryzias_latipes
ENSEASG00005012924	A1CF	100	76.098	ENSORLG00020000586	a1cf	100	76.461	Oryzias_latipes_hni
ENSEASG00005012924	A1CF	100	75.935	ENSORLG00015018569	a1cf	100	76.299	Oryzias_latipes_hsok
ENSEASG00005012924	A1CF	100	74.837	ENSOMEG00000013531	a1cf	100	74.673	Oryzias_melastigma
ENSEASG00005012924	A1CF	100	94.305	ENSOGAG00000012884	A1CF	100	94.472	Otolemur_garnettii
ENSEASG00005012924	A1CF	100	96.985	ENSOARG00000013695	A1CF	100	96.985	Ovis_aries
ENSEASG00005012924	A1CF	99	95.147	ENSPPAG00000028115	A1CF	100	98.381	Pan_paniscus
ENSEASG00005012924	A1CF	100	95.980	ENSPPRG00000012180	A1CF	100	95.980	Panthera_pardus
ENSEASG00005012924	A1CF	100	95.980	ENSPTIG00000021223	A1CF	100	95.980	Panthera_tigris_altaica
ENSEASG00005012924	A1CF	100	96.482	ENSPTRG00000002508	A1CF	100	96.482	Pan_troglodytes
ENSEASG00005012924	A1CF	100	95.477	ENSPANG00000021988	A1CF	100	95.477	Papio_anubis
ENSEASG00005012924	A1CF	100	80.100	ENSPKIG00000025176	a1cf	100	79.934	Paramormyrops_kingsleyae
ENSEASG00005012924	A1CF	100	86.789	ENSPSIG00000010318	A1CF	100	86.789	Pelodiscus_sinensis
ENSEASG00005012924	A1CF	88	71.048	ENSPMGG00000013359	a1cf	89	71.619	Periophthalmus_magnuspinnatus
ENSEASG00005012924	A1CF	100	94.807	ENSPEMG00000015021	A1cf	100	94.640	Peromyscus_maniculatus_bairdii
ENSEASG00005012924	A1CF	100	88.629	ENSPCIG00000002175	A1CF	100	88.629	Phascolarctos_cinereus
ENSEASG00005012924	A1CF	100	76.098	ENSPFOG00000006683	a1cf	100	77.561	Poecilia_formosa
ENSEASG00005012924	A1CF	100	75.935	ENSPFOG00000007437	-	100	77.398	Poecilia_formosa
ENSEASG00005012924	A1CF	100	74.797	ENSPLAG00000001210	-	100	76.260	Poecilia_latipinna
ENSEASG00005012924	A1CF	100	74.797	ENSPLAG00000000026	a1cf	100	76.260	Poecilia_latipinna
ENSEASG00005012924	A1CF	100	67.374	ENSPMEG00000000921	a1cf	100	68.842	Poecilia_mexicana
ENSEASG00005012924	A1CF	100	68.515	ENSPMEG00000015529	-	100	69.984	Poecilia_mexicana
ENSEASG00005012924	A1CF	100	76.098	ENSPREG00000016298	a1cf	100	77.398	Poecilia_reticulata
ENSEASG00005012924	A1CF	100	96.147	ENSPPYG00000002819	A1CF	100	96.147	Pongo_abelii
ENSEASG00005012924	A1CF	82	73.684	ENSPCAG00000006463	A1CF	70	89.796	Procavia_capensis
ENSEASG00005012924	A1CF	100	96.817	ENSPCOG00000024172	A1CF	100	96.817	Propithecus_coquereli
ENSEASG00005012924	A1CF	100	76.059	ENSPNYG00000017944	a1cf	100	77.850	Pundamilia_nyererei
ENSEASG00005012924	A1CF	100	80.464	ENSPNAG00000007704	a1cf	100	80.298	Pygocentrus_nattereri
ENSEASG00005012924	A1CF	100	92.462	ENSRNOG00000033195	A1cf	100	92.127	Rattus_norvegicus
ENSEASG00005012924	A1CF	100	89.816	ENSRBIG00000042892	A1CF	100	92.982	Rhinopithecus_bieti
ENSEASG00005012924	A1CF	100	96.817	ENSRROG00000041398	A1CF	100	96.817	Rhinopithecus_roxellana
ENSEASG00005012924	A1CF	100	97.320	ENSSBOG00000021930	A1CF	100	97.320	Saimiri_boliviensis_boliviensis
ENSEASG00005012924	A1CF	100	90.134	ENSSHAG00000005096	A1CF	100	90.134	Sarcophilus_harrisii
ENSEASG00005012924	A1CF	100	79.436	ENSSFOG00015011774	a1cf	100	79.602	Scleropages_formosus
ENSEASG00005012924	A1CF	100	75.122	ENSSMAG00000013271	a1cf	100	75.447	Scophthalmus_maximus
ENSEASG00005012924	A1CF	100	76.159	ENSSDUG00000013930	a1cf	100	77.152	Seriola_dumerili
ENSEASG00005012924	A1CF	100	70.181	ENSSLDG00000004290	a1cf	100	69.852	Seriola_lalandi_dorsalis
ENSEASG00005012924	A1CF	99	84.000	ENSSARG00000005940	A1CF	97	84.000	Sorex_araneus
ENSEASG00005012924	A1CF	100	86.106	ENSSPUG00000006797	A1CF	97	86.106	Sphenodon_punctatus
ENSEASG00005012924	A1CF	100	97.487	ENSSSCG00000010431	A1CF	100	97.487	Sus_scrofa
ENSEASG00005012924	A1CF	100	88.294	ENSTGUG00000005090	A1CF	100	88.294	Taeniopygia_guttata
ENSEASG00005012924	A1CF	100	74.593	ENSTRUG00000001982	a1cf	100	74.104	Takifugu_rubripes
ENSEASG00005012924	A1CF	100	74.675	ENSTNIG00000003580	a1cf	100	74.513	Tetraodon_nigroviridis
ENSEASG00005012924	A1CF	100	88.640	ENSTTRG00000013190	A1CF	96	88.468	Tursiops_truncatus
ENSEASG00005012924	A1CF	100	95.142	ENSUAMG00000020065	A1CF	100	95.142	Ursus_americanus
ENSEASG00005012924	A1CF	100	95.980	ENSUMAG00000011162	A1CF	100	95.980	Ursus_maritimus
ENSEASG00005012924	A1CF	89	90.787	ENSVPAG00000006130	A1CF	86	90.787	Vicugna_pacos
ENSEASG00005012924	A1CF	100	94.975	ENSVVUG00000002504	A1CF	100	94.975	Vulpes_vulpes
ENSEASG00005012924	A1CF	100	78.405	ENSXETG00000006611	a1cf	100	78.073	Xenopus_tropicalis
ENSEASG00005012924	A1CF	100	76.105	ENSXCOG00000003302	a1cf	100	77.087	Xiphophorus_couchianus
ENSEASG00005012924	A1CF	100	77.250	ENSXMAG00000016703	a1cf	100	78.232	Xiphophorus_maculatus