EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005012991 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 8265 bases
Position: chrPSZQ01003226.1:621058-629322
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005018853	LSM	PF01423.22	8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005020457	SNRPB-201	809	-	ENSEASP00005018853	231 (aa)	-	-

Gene Model

Click here to download ENSEASG00005012991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005012991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005012991	SNRPB	96	91.855	ENSEASG00005017871	SNRPN	92	91.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005012991	SNRPB	100	99.567	ENSG00000125835	SNRPB	100	99.567	Homo_sapiens
ENSEASG00005012991	SNRPB	78	92.265	ENSAPOG00000019606	snrpb	56	94.048	Acanthochromis_polyacanthus
ENSEASG00005012991	SNRPB	99	99.561	ENSAMEG00000011353	SNRPB	94	99.561	Ailuropoda_melanoleuca
ENSEASG00005012991	SNRPB	76	92.000	ENSACIG00000014480	snrpb	71	93.827	Amphilophus_citrinellus
ENSEASG00005012991	SNRPB	78	92.265	ENSAOCG00000006876	snrpb	69	94.048	Amphiprion_ocellaris
ENSEASG00005012991	SNRPB	78	92.265	ENSAPEG00000021585	snrpb	71	94.048	Amphiprion_percula
ENSEASG00005012991	SNRPB	78	91.713	ENSATEG00000009836	snrpb	69	93.452	Anabas_testudineus
ENSEASG00005012991	SNRPB	92	94.836	ENSACAG00000002053	SNRPB	92	94.836	Anolis_carolinensis
ENSEASG00005012991	SNRPB	100	99.567	ENSANAG00000024443	-	100	99.567	Aotus_nancymaae
ENSEASG00005012991	SNRPB	99	92.609	ENSANAG00000036271	-	76	92.593	Aotus_nancymaae
ENSEASG00005012991	SNRPB	78	92.265	ENSACLG00000014707	snrpb	69	94.048	Astatotilapia_calliptera
ENSEASG00005012991	SNRPB	73	92.262	ENSAMXG00000029434	snrpb	70	93.452	Astyanax_mexicanus
ENSEASG00005012991	SNRPB	100	99.134	ENSBTAG00000001038	SNRPB	100	99.134	Bos_taurus
ENSEASG00005012991	SNRPB	100	99.567	ENSCJAG00000020971	-	100	99.567	Callithrix_jacchus
ENSEASG00005012991	SNRPB	93	91.589	ENSCJAG00000023097	-	79	91.534	Callithrix_jacchus
ENSEASG00005012991	SNRPB	100	99.567	ENSCAFG00000006693	-	100	99.567	Canis_familiaris
ENSEASG00005012991	SNRPB	81	88.421	ENSCAFG00000031109	-	79	84.737	Canis_familiaris
ENSEASG00005012991	SNRPB	99	99.563	ENSCAFG00020016981	-	95	99.563	Canis_lupus_dingo
ENSEASG00005012991	SNRPB	100	99.134	ENSCHIG00000025449	-	100	99.134	Capra_hircus
ENSEASG00005012991	SNRPB	97	76.444	ENSTSYG00000032303	-	55	78.667	Carlito_syrichta
ENSEASG00005012991	SNRPB	100	99.567	ENSTSYG00000014498	-	100	99.567	Carlito_syrichta
ENSEASG00005012991	SNRPB	99	99.565	ENSCAPG00000012669	SNRPB	100	99.565	Cavia_aperea
ENSEASG00005012991	SNRPB	100	99.567	ENSCPOG00000039408	SNRPB	100	99.567	Cavia_porcellus
ENSEASG00005012991	SNRPB	100	99.567	ENSCCAG00000026002	SNRPB	100	99.567	Cebus_capucinus
ENSEASG00005012991	SNRPB	55	87.402	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSEASG00005012991	SNRPB	100	99.567	ENSCATG00000030230	SNRPB	100	99.567	Cercocebus_atys
ENSEASG00005012991	SNRPB	98	99.558	ENSCLAG00000012442	SNRPB	95	99.558	Chinchilla_lanigera
ENSEASG00005012991	SNRPB	100	99.567	ENSCSAG00000010840	SNRPB	100	99.567	Chlorocebus_sabaeus
ENSEASG00005012991	SNRPB	99	96.070	ENSCPBG00000026801	SNRPB	99	96.070	Chrysemys_picta_bellii
ENSEASG00005012991	SNRPB	100	99.567	ENSCANG00000019461	SNRPB	100	99.567	Colobus_angolensis_palliatus
ENSEASG00005012991	SNRPB	100	99.567	ENSCGRG00001023046	Snrpb	100	99.567	Cricetulus_griseus_chok1gshd
ENSEASG00005012991	SNRPB	96	99.548	ENSCGRG00000010423	Snrpb	98	99.548	Cricetulus_griseus_crigri
ENSEASG00005012991	SNRPB	79	91.803	ENSCSEG00000020328	snrpb	70	94.048	Cynoglossus_semilaevis
ENSEASG00005012991	SNRPB	73	92.857	ENSDARG00000011125	snrpb	69	94.048	Danio_rerio
ENSEASG00005012991	SNRPB	75	93.642	ENSDNOG00000007896	-	71	93.642	Dasypus_novemcinctus
ENSEASG00005012991	SNRPB	99	99.563	ENSDNOG00000015545	-	95	99.563	Dasypus_novemcinctus
ENSEASG00005012991	SNRPB	97	99.103	ENSDORG00000029558	Snrpb	97	99.103	Dipodomys_ordii
ENSEASG00005012991	SNRPB	65	71.141	FBgn0262601	SmB	74	71.141	Drosophila_melanogaster
ENSEASG00005012991	SNRPB	79	78.142	ENSETEG00000006830	SNRPB	74	76.786	Echinops_telfairi
ENSEASG00005012991	SNRPB	78	79.570	ENSEBUG00000007467	SNRPB	62	87.919	Eptatretus_burgeri
ENSEASG00005012991	SNRPB	100	99.567	ENSECAG00000011944	SNRPB	100	99.567	Equus_caballus
ENSEASG00005012991	SNRPB	98	99.558	ENSEEUG00000015568	SNRPB	80	99.558	Erinaceus_europaeus
ENSEASG00005012991	SNRPB	63	95.172	ENSELUG00000014564	snrpb	71	92.593	Esox_lucius
ENSEASG00005012991	SNRPB	100	99.567	ENSFCAG00000034090	-	100	99.567	Felis_catus
ENSEASG00005012991	SNRPB	74	95.349	ENSFALG00000004866	SNRPB	92	95.305	Ficedula_albicollis
ENSEASG00005012991	SNRPB	100	99.567	ENSFDAG00000009937	SNRPB	100	99.567	Fukomys_damarensis
ENSEASG00005012991	SNRPB	78	95.556	ENSGALG00000035421	SNRPN	92	95.475	Gallus_gallus
ENSEASG00005012991	SNRPB	74	92.442	ENSGAFG00000019558	snrpb	72	93.413	Gambusia_affinis
ENSEASG00005012991	SNRPB	79	90.710	ENSGACG00000003262	snrpb	70	94.048	Gasterosteus_aculeatus
ENSEASG00005012991	SNRPB	99	96.070	ENSGAGG00000001308	SNRPB	95	96.070	Gopherus_agassizii
ENSEASG00005012991	SNRPB	100	99.567	ENSGGOG00000016138	SNRPB	100	99.567	Gorilla_gorilla
ENSEASG00005012991	SNRPB	78	92.265	ENSHBUG00000008369	snrpb	69	94.048	Haplochromis_burtoni
ENSEASG00005012991	SNRPB	100	99.567	ENSHGLG00000016241	-	100	99.567	Heterocephalus_glaber_female
ENSEASG00005012991	SNRPB	65	89.333	ENSHGLG00000016505	-	72	89.333	Heterocephalus_glaber_female
ENSEASG00005012991	SNRPB	65	89.333	ENSHGLG00100004178	-	72	89.333	Heterocephalus_glaber_male
ENSEASG00005012991	SNRPB	100	99.567	ENSHGLG00100012877	-	100	99.567	Heterocephalus_glaber_male
ENSEASG00005012991	SNRPB	79	91.803	ENSHCOG00000014888	snrpb	70	94.048	Hippocampus_comes
ENSEASG00005012991	SNRPB	73	92.857	ENSIPUG00000024569	SNRPB	70	94.048	Ictalurus_punctatus
ENSEASG00005012991	SNRPB	94	81.481	ENSSTOG00000027821	-	62	98.529	Ictidomys_tridecemlineatus
ENSEASG00005012991	SNRPB	99	97.817	ENSSTOG00000033664	-	95	97.817	Ictidomys_tridecemlineatus
ENSEASG00005012991	SNRPB	100	99.567	ENSJJAG00000024170	Snrpb	100	99.567	Jaculus_jaculus
ENSEASG00005012991	SNRPB	75	93.642	ENSKMAG00000014494	snrpb	68	94.643	Kryptolebias_marmoratus
ENSEASG00005012991	SNRPB	79	91.803	ENSLBEG00000005678	snrpb	70	94.048	Labrus_bergylta
ENSEASG00005012991	SNRPB	96	92.760	ENSLACG00000011459	SNRPB	92	92.760	Latimeria_chalumnae
ENSEASG00005012991	SNRPB	73	93.452	ENSLOCG00000002687	snrpb	70	94.643	Lepisosteus_oculatus
ENSEASG00005012991	SNRPB	99	95.614	ENSLAFG00000017588	SNRPB	99	95.614	Loxodonta_africana
ENSEASG00005012991	SNRPB	100	99.567	ENSMFAG00000038756	SNRPB	100	99.567	Macaca_fascicularis
ENSEASG00005012991	SNRPB	100	99.567	ENSMMUG00000010050	SNRPB	100	99.567	Macaca_mulatta
ENSEASG00005012991	SNRPB	100	99.567	ENSMNEG00000027954	SNRPB	100	99.567	Macaca_nemestrina
ENSEASG00005012991	SNRPB	100	99.567	ENSMLEG00000022346	SNRPB	100	99.567	Mandrillus_leucophaeus
ENSEASG00005012991	SNRPB	78	92.222	ENSMAMG00000009294	snrpb	67	94.012	Mastacembelus_armatus
ENSEASG00005012991	SNRPB	78	92.265	ENSMZEG00005011856	snrpb	69	94.048	Maylandia_zebra
ENSEASG00005012991	SNRPB	100	99.134	ENSMICG00000016519	SNRPB	100	99.134	Microcebus_murinus
ENSEASG00005012991	SNRPB	97	84.889	ENSMICG00000015983	-	87	89.418	Microcebus_murinus
ENSEASG00005012991	SNRPB	100	99.134	ENSMOCG00000002892	-	100	99.134	Microtus_ochrogaster
ENSEASG00005012991	SNRPB	72	70.060	ENSMOCG00000021362	-	72	73.410	Microtus_ochrogaster
ENSEASG00005012991	SNRPB	79	92.308	ENSMMOG00000013226	snrpb	71	94.012	Mola_mola
ENSEASG00005012991	SNRPB	78	91.713	ENSMALG00000020839	snrpb	56	93.452	Monopterus_albus
ENSEASG00005012991	SNRPB	100	99.134	MGP_CAROLIEiJ_G0024293	Snrpb	100	99.134	Mus_caroli
ENSEASG00005012991	SNRPB	100	99.134	ENSMUSG00000027404	Snrpb	100	99.134	Mus_musculus
ENSEASG00005012991	SNRPB	100	99.134	MGP_PahariEiJ_G0025738	Snrpb	100	99.134	Mus_pahari
ENSEASG00005012991	SNRPB	100	99.134	MGP_SPRETEiJ_G0025213	Snrpb	100	99.134	Mus_spretus
ENSEASG00005012991	SNRPB	100	99.567	ENSMPUG00000009283	SNRPB	100	99.567	Mustela_putorius_furo
ENSEASG00005012991	SNRPB	99	96.507	ENSMLUG00000016951	SNRPB	95	96.507	Myotis_lucifugus
ENSEASG00005012991	SNRPB	100	99.567	ENSNGAG00000012051	Snrpb	100	99.567	Nannospalax_galili
ENSEASG00005012991	SNRPB	78	89.503	ENSNBRG00000006353	snrpb	62	92.683	Neolamprologus_brichardi
ENSEASG00005012991	SNRPB	99	99.563	ENSNLEG00000029067	SNRPB	96	99.561	Nomascus_leucogenys
ENSEASG00005012991	SNRPB	97	96.889	ENSMEUG00000015625	SNRPB	100	96.889	Notamacropus_eugenii
ENSEASG00005012991	SNRPB	100	99.567	ENSODEG00000004305	-	100	99.567	Octodon_degus
ENSEASG00005012991	SNRPB	98	96.018	ENSODEG00000016060	-	95	96.018	Octodon_degus
ENSEASG00005012991	SNRPB	78	92.265	ENSONIG00000000248	snrpb	69	94.048	Oreochromis_niloticus
ENSEASG00005012991	SNRPB	93	94.419	ENSOCUG00000021456	-	78	95.238	Oryctolagus_cuniculus
ENSEASG00005012991	SNRPB	77	92.737	ENSOCUG00000022423	-	86	95.833	Oryctolagus_cuniculus
ENSEASG00005012991	SNRPB	99	96.943	ENSOCUG00000028215	-	95	96.943	Oryctolagus_cuniculus
ENSEASG00005012991	SNRPB	91	72.038	ENSOCUG00000026813	-	63	70.270	Oryctolagus_cuniculus
ENSEASG00005012991	SNRPB	99	99.127	ENSOCUG00000014042	-	95	99.127	Oryctolagus_cuniculus
ENSEASG00005012991	SNRPB	78	91.713	ENSORLG00000021862	snrpb	69	94.048	Oryzias_latipes
ENSEASG00005012991	SNRPB	99	99.563	ENSOGAG00000016149	SNRPB	95	99.563	Otolemur_garnettii
ENSEASG00005012991	SNRPB	100	99.134	ENSOARG00000006740	SNRPB	100	99.134	Ovis_aries
ENSEASG00005012991	SNRPB	100	99.567	ENSPPAG00000036314	SNRPB	100	99.567	Pan_paniscus
ENSEASG00005012991	SNRPB	100	99.567	ENSPPRG00000003233	-	100	99.567	Panthera_pardus
ENSEASG00005012991	SNRPB	99	99.565	ENSPTIG00000007468	SNRPB	99	99.565	Panthera_tigris_altaica
ENSEASG00005012991	SNRPB	100	99.567	ENSPTRG00000013176	SNRPB	100	99.567	Pan_troglodytes
ENSEASG00005012991	SNRPB	99	99.565	ENSPANG00000020362	SNRPB	95	99.563	Papio_anubis
ENSEASG00005012991	SNRPB	73	92.262	ENSPKIG00000002865	snrpb	70	93.452	Paramormyrops_kingsleyae
ENSEASG00005012991	SNRPB	99	96.053	ENSPSIG00000014125	SNRPB	94	96.053	Pelodiscus_sinensis
ENSEASG00005012991	SNRPB	77	89.888	ENSPMGG00000016349	snrpb	69	91.411	Periophthalmus_magnuspinnatus
ENSEASG00005012991	SNRPB	100	99.567	ENSPEMG00000007948	Snrpb	100	99.567	Peromyscus_maniculatus_bairdii
ENSEASG00005012991	SNRPB	99	97.368	ENSPCIG00000004694	SNRPB	95	97.368	Phascolarctos_cinereus
ENSEASG00005012991	SNRPB	82	76.316	ENSPREG00000015515	snrpb	62	94.815	Poecilia_reticulata
ENSEASG00005012991	SNRPB	100	99.567	ENSPPYG00000010841	SNRPB	100	99.567	Pongo_abelii
ENSEASG00005012991	SNRPB	100	99.567	ENSPCOG00000013686	SNRPB	100	99.567	Propithecus_coquereli
ENSEASG00005012991	SNRPB	98	98.238	ENSPVAG00000017013	SNRPB	80	98.238	Pteropus_vampyrus
ENSEASG00005012991	SNRPB	78	92.265	ENSPNYG00000014788	snrpb	69	94.048	Pundamilia_nyererei
ENSEASG00005012991	SNRPB	77	92.090	ENSPNAG00000016126	snrpb	70	94.048	Pygocentrus_nattereri
ENSEASG00005012991	SNRPB	100	99.567	ENSRNOG00000006961	Snrpb	100	99.567	Rattus_norvegicus
ENSEASG00005012991	SNRPB	100	99.134	ENSRBIG00000040505	SNRPB	100	99.134	Rhinopithecus_bieti
ENSEASG00005012991	SNRPB	100	99.567	ENSRROG00000036094	SNRPB	100	99.567	Rhinopithecus_roxellana
ENSEASG00005012991	SNRPB	100	99.567	ENSSBOG00000027310	SNRPB	100	99.567	Saimiri_boliviensis_boliviensis
ENSEASG00005012991	SNRPB	99	97.817	ENSSHAG00000010394	SNRPB	95	97.817	Sarcophilus_harrisii
ENSEASG00005012991	SNRPB	73	91.667	ENSSFOG00015002870	snrpb	70	92.857	Scleropages_formosus
ENSEASG00005012991	SNRPB	79	91.257	ENSSMAG00000006766	snrpb	70	93.452	Scophthalmus_maximus
ENSEASG00005012991	SNRPB	78	92.265	ENSSDUG00000018539	snrpb	69	94.048	Seriola_dumerili
ENSEASG00005012991	SNRPB	78	92.265	ENSSLDG00000022391	snrpb	69	94.048	Seriola_lalandi_dorsalis
ENSEASG00005012991	SNRPB	74	84.884	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSEASG00005012991	SNRPB	99	96.053	ENSSPUG00000015659	SNRPB	95	96.053	Sphenodon_punctatus
ENSEASG00005012991	SNRPB	78	92.265	ENSSPAG00000021992	snrpb	69	94.048	Stegastes_partitus
ENSEASG00005012991	SNRPB	100	79.654	ENSSSCG00000011966	-	91	75.472	Sus_scrofa
ENSEASG00005012991	SNRPB	100	99.134	ENSSSCG00000040857	-	100	99.134	Sus_scrofa
ENSEASG00005012991	SNRPB	77	79.096	ENSTGUG00000005684	SNRPB	59	95.714	Taeniopygia_guttata
ENSEASG00005012991	SNRPB	79	91.257	ENSTRUG00000023094	snrpb	72	93.452	Takifugu_rubripes
ENSEASG00005012991	SNRPB	79	91.257	ENSTNIG00000002991	snrpb	70	93.452	Tetraodon_nigroviridis
ENSEASG00005012991	SNRPB	75	99.422	ENSUAMG00000005984	-	83	99.422	Ursus_americanus
ENSEASG00005012991	SNRPB	59	98.540	ENSUMAG00000002123	-	64	97.122	Ursus_maritimus
ENSEASG00005012991	SNRPB	64	43.713	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSEASG00005012991	SNRPB	97	79.295	ENSVVUG00000010086	-	85	80.612	Vulpes_vulpes
ENSEASG00005012991	SNRPB	99	99.127	ENSVVUG00000025654	-	95	99.127	Vulpes_vulpes
ENSEASG00005012991	SNRPB	82	95.238	ENSXETG00000027266	snrpb	72	94.706	Xenopus_tropicalis
ENSEASG00005012991	SNRPB	74	78.363	ENSXMAG00000028767	snrpb	58	94.815	Xiphophorus_maculatus