EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEASG00005013089 (Gene tree)
Gene ID
-
Gene Symbol
DDX42
Alias
RHELP|RNAHP|SF3B8|SF3b125
Full Name
DEAD-box helicase 42
Gene Type
protein_coding
Species
Equus_asinus_asinus
Status
putative
Strand
Plus strand
Length
29672 bases
Position
chrPSZQ01001389.1:5834389-5864060
Accession
18676
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEASP00005019535ResIIIPF04851.156.2e-0711
ENSEASP00005019432ResIIIPF04851.157.2e-0711
ENSEASP00005019515ResIIIPF04851.151.3e-0611
ENSEASP00005019478ResIIIPF04851.151.4e-0611
ENSEASP00005019461ResIIIPF04851.151.4e-0611
ENSEASP00005019458ResIIIPF04851.151.4e-0611
ENSEASP00005019535DEADPF00270.293.4e-5011
ENSEASP00005019515DEADPF00270.296e-5011
ENSEASP00005019478DEADPF00270.296.3e-5011
ENSEASP00005019461DEADPF00270.296.7e-5011
ENSEASP00005019458DEADPF00270.297e-5011
ENSEASP00005019432DEADPF00270.297.3e-5011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEAST00005021195DDX42-2062118-ENSEASP00005019535705 (aa)--
ENSEAST00005021171DDX42-2052631-ENSEASP00005019515876 (aa)--
ENSEAST00005021082DDX42-2012808-ENSEASP00005019432935 (aa)--
ENSEAST00005021113DDX42-2032733-ENSEASP00005019461910 (aa)--
ENSEAST00005021110DDX42-2022766-ENSEASP00005019458921 (aa)--
ENSEAST00005021132DDX42-2042673-ENSEASP00005019478890 (aa)--
Gene Model
Click here to download ENSEASG00005013089's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005013089's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEASG00005013089DDX426037.358ENSEASG00005001728-6737.358
ENSEASG00005013089DDX425340.347ENSEASG00005000455DDX235139.234
ENSEASG00005013089DDX428137.308ENSEASG00005014694DDX58742.857
ENSEASG00005013089DDX425338.131ENSEASG00005009841DDX3X9236.878
ENSEASG00005013089DDX425935.154ENSEASG00005003122DDX599035.154
ENSEASG00005013089DDX426037.644ENSEASG00005004346-6337.251
ENSEASG00005013089DDX425430.287ENSEASG00005005107EIF4A39030.287
ENSEASG00005013089DDX425130.685ENSEASG00005017156DDX39B8630.319
ENSEASG00005013089DDX425030.769ENSEASG00005004961DDX67230.769
ENSEASG00005013089DDX426338.829ENSEASG00005012427DDX417138.829
ENSEASG00005013089DDX425130.645ENSEASG00005013405-7630.645
ENSEASG00005013089DDX425031.948ENSEASG00005012650DDX557531.688
ENSEASG00005013089DDX425433.753ENSEASG00005011275DDX526033.753
ENSEASG00005013089DDX426645.726ENSEASG00005020329DDX465839.630
ENSEASG00005013089DDX425131.117ENSEASG00005015272DDX39A8632.609
ENSEASG00005013089DDX425038.483ENSEASG00005014653DDX477638.483
ENSEASG00005013089DDX425737.442ENSEASG00005012087DDX3Y6437.209
ENSEASG00005013089DDX426143.880ENSEASG00005018767DDX177141.770
ENSEASG00005013089DDX425738.889ENSEASG00005012143DDX46936.957
ENSEASG00005013089DDX425434.577ENSEASG00005006560DDX497834.577
ENSEASG00005013089DDX425134.771ENSEASG00005023342DDX275134.771
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEASG00005013089DDX4210096.805ENSG00000198231DDX42100100.000Homo_sapiens
ENSEASG00005013089DDX429381.024ENSAPOG00000017675ddx429873.400Acanthochromis_polyacanthus
ENSEASG00005013089DDX4210097.650ENSAMEG00000003200DDX4210097.650Ailuropoda_melanoleuca
ENSEASG00005013089DDX429181.522ENSACIG00000007376ddx429972.222Amphilophus_citrinellus
ENSEASG00005013089DDX429977.983ENSAOCG00000003520ddx4210071.690Amphiprion_ocellaris
ENSEASG00005013089DDX429978.205ENSAPEG00000000984ddx4210071.737Amphiprion_percula
ENSEASG00005013089DDX4210071.521ENSATEG00000022920ddx429971.878Anabas_testudineus
ENSEASG00005013089DDX429991.429ENSAPLG00000010544DDX4210084.582Anas_platyrhynchos
ENSEASG00005013089DDX429989.109ENSACAG00000003994DDX429983.953Anolis_carolinensis
ENSEASG00005013089DDX4210096.898ENSANAG00000035693DDX4210096.898Aotus_nancymaae
ENSEASG00005013089DDX429978.063ENSACLG00000025113ddx4210072.958Astatotilapia_calliptera
ENSEASG00005013089DDX429083.438ENSAMXG00000011435ddx4210069.174Astyanax_mexicanus
ENSEASG00005013089DDX429996.571ENSBTAG00000021058DDX4210095.565Bos_taurus
ENSEASG00005013089DDX428352.623WBGene00008119C46F11.47852.895Caenorhabditis_elegans
ENSEASG00005013089DDX4210096.898ENSCJAG00000019649DDX429998.695Callithrix_jacchus
ENSEASG00005013089DDX4210098.182ENSCAFG00000012818DDX4210098.182Canis_familiaris
ENSEASG00005013089DDX4210098.289ENSCAFG00020026631DDX4210098.289Canis_lupus_dingo
ENSEASG00005013089DDX4210096.699ENSCHIG00000014431DDX4210096.699Capra_hircus
ENSEASG00005013089DDX429997.004ENSTSYG00000001380DDX4210095.940Carlito_syrichta
ENSEASG00005013089DDX429676.296ENSCAPG00000013621DDX429476.366Cavia_aperea
ENSEASG00005013089DDX429997.571ENSCPOG00000005633DDX4210096.371Cavia_porcellus
ENSEASG00005013089DDX429997.701ENSCCAG00000020612DDX4210096.547Cebus_capucinus
ENSEASG00005013089DDX4210096.592ENSCATG00000030490DDX4210096.592Cercocebus_atys
ENSEASG00005013089DDX4210097.222ENSCLAG00000003497DDX4210097.222Chinchilla_lanigera
ENSEASG00005013089DDX4210092.903ENSCSAG00000003914DDX4210092.903Chlorocebus_sabaeus
ENSEASG00005013089DDX427995.536ENSCHOG00000006241DDX427995.536Choloepus_hoffmanni
ENSEASG00005013089DDX429989.341ENSCPBG00000026682DDX4210083.386Chrysemys_picta_bellii
ENSEASG00005013089DDX426366.219ENSCING00000001837-9467.832Ciona_intestinalis
ENSEASG00005013089DDX425471.615ENSCSAVG00000002180-9971.615Ciona_savignyi
ENSEASG00005013089DDX4210096.699ENSCANG00000034663DDX429997.986Colobus_angolensis_palliatus
ENSEASG00005013089DDX429996.857ENSCGRG00001009775Ddx4210095.508Cricetulus_griseus_chok1gshd
ENSEASG00005013089DDX429996.857ENSCGRG00000011718Ddx4210095.508Cricetulus_griseus_crigri
ENSEASG00005013089DDX429975.892ENSCSEG00000021574ddx4210070.285Cynoglossus_semilaevis
ENSEASG00005013089DDX429977.240ENSCVAG00000011404ddx429971.172Cyprinodon_variegatus
ENSEASG00005013089DDX429082.812ENSDARG00000037928ddx4210070.947Danio_rerio
ENSEASG00005013089DDX4210090.405ENSDNOG00000007961DDX4210090.405Dasypus_novemcinctus
ENSEASG00005013089DDX429992.593ENSDORG00000004199Ddx4210087.646Dipodomys_ordii
ENSEASG00005013089DDX427962.390FBgn0036104CG64188756.052Drosophila_melanogaster
ENSEASG00005013089DDX428876.320ENSEBUG00000001155ddx429173.210Eptatretus_burgeri
ENSEASG00005013089DDX4210099.786ENSECAG00000022684DDX4210099.786Equus_caballus
ENSEASG00005013089DDX4270100.000ENSEEUG00000009144DDX4282100.000Erinaceus_europaeus
ENSEASG00005013089DDX428981.377ENSELUG00000020593ddx4210070.632Esox_lucius
ENSEASG00005013089DDX4210098.824ENSFCAG00000003499DDX4210098.824Felis_catus
ENSEASG00005013089DDX429990.374ENSFALG00000004675DDX427290.256Ficedula_albicollis
ENSEASG00005013089DDX429997.857ENSFDAG00000020516DDX4210096.798Fukomys_damarensis
ENSEASG00005013089DDX429976.638ENSFHEG00000023290ddx4210069.635Fundulus_heteroclitus
ENSEASG00005013089DDX428378.947ENSGMOG00000004595ddx427978.138Gadus_morhua
ENSEASG00005013089DDX429988.951ENSGALG00000000581DDX4210083.228Gallus_gallus
ENSEASG00005013089DDX429977.253ENSGAFG00000011846ddx429474.160Gambusia_affinis
ENSEASG00005013089DDX429475.676ENSGACG00000009782ddx4210068.333Gasterosteus_aculeatus
ENSEASG00005013089DDX429989.873ENSGAGG00000024411DDX429983.246Gopherus_agassizii
ENSEASG00005013089DDX4210096.805ENSGGOG00000006779DDX4210096.805Gorilla_gorilla
ENSEASG00005013089DDX429978.063ENSHBUG00000008705ddx4210071.957Haplochromis_burtoni
ENSEASG00005013089DDX4210094.028ENSHGLG00000010024DDX4210094.028Heterocephalus_glaber_female
ENSEASG00005013089DDX4210097.540ENSHGLG00100004479-10097.540Heterocephalus_glaber_male
ENSEASG00005013089DDX429974.286ENSHGLG00100007138-9573.858Heterocephalus_glaber_male
ENSEASG00005013089DDX429082.306ENSHCOG00000003357ddx4210071.588Hippocampus_comes
ENSEASG00005013089DDX428983.148ENSIPUG00000013327ddx4210070.925Ictalurus_punctatus
ENSEASG00005013089DDX4210097.972ENSSTOG00000008922DDX4210097.972Ictidomys_tridecemlineatus
ENSEASG00005013089DDX4210095.620ENSJJAG00000011727Ddx4210095.620Jaculus_jaculus
ENSEASG00005013089DDX429479.940ENSKMAG00000009914ddx4210072.440Kryptolebias_marmoratus
ENSEASG00005013089DDX429076.888ENSLBEG00000004687ddx4210069.484Labrus_bergylta
ENSEASG00005013089DDX429384.604ENSLACG00000013476DDX429778.698Latimeria_chalumnae
ENSEASG00005013089DDX429980.775ENSLOCG00000011764ddx4210074.707Lepisosteus_oculatus
ENSEASG00005013089DDX4210097.540ENSLAFG00000003249DDX4210097.540Loxodonta_africana
ENSEASG00005013089DDX4210096.592ENSMFAG00000031356DDX4210096.592Macaca_fascicularis
ENSEASG00005013089DDX429997.701ENSMMUG00000016762DDX4210096.220Macaca_mulatta
ENSEASG00005013089DDX4210096.592ENSMNEG00000038250DDX4210096.592Macaca_nemestrina
ENSEASG00005013089DDX4210096.699ENSMLEG00000043080DDX4210096.699Mandrillus_leucophaeus
ENSEASG00005013089DDX429481.109ENSMAMG00000021888ddx429872.210Mastacembelus_armatus
ENSEASG00005013089DDX429978.063ENSMZEG00005023103ddx4210071.848Maylandia_zebra
ENSEASG00005013089DDX429989.930ENSMGAG00000001822DDX4210083.439Meleagris_gallopavo
ENSEASG00005013089DDX429997.554ENSMAUG00000020774-9497.443Mesocricetus_auratus
ENSEASG00005013089DDX4210097.540ENSMICG00000009952DDX4210096.898Microcebus_murinus
ENSEASG00005013089DDX429996.714ENSMOCG00000015504Ddx4210094.439Microtus_ochrogaster
ENSEASG00005013089DDX429076.875ENSMMOG00000016963ddx428871.412Mola_mola
ENSEASG00005013089DDX425098.073ENSMODG00000009917-9898.073Monodelphis_domestica
ENSEASG00005013089DDX429480.902ENSMALG00000007800ddx4210072.380Monopterus_albus
ENSEASG00005013089DDX429997.429MGP_CAROLIEiJ_G0017314Ddx4210096.150Mus_caroli
ENSEASG00005013089DDX429997.429ENSMUSG00000020705Ddx4210096.150Mus_musculus
ENSEASG00005013089DDX427999.463MGP_PahariEiJ_G0018444-10099.553Mus_pahari
ENSEASG00005013089DDX429997.429MGP_SPRETEiJ_G0018158Ddx4210096.150Mus_spretus
ENSEASG00005013089DDX4210097.981ENSMPUG00000014921DDX4210097.981Mustela_putorius_furo
ENSEASG00005013089DDX429997.571ENSMLUG00000011645DDX4210096.523Myotis_lucifugus
ENSEASG00005013089DDX429997.991ENSNGAG00000021897Ddx4210095.513Nannospalax_galili
ENSEASG00005013089DDX429476.747ENSNBRG00000004466ddx4210072.988Neolamprologus_brichardi
ENSEASG00005013089DDX4210096.592ENSNLEG00000004248DDX429997.989Nomascus_leucogenys
ENSEASG00005013089DDX428282.788ENSMEUG00000013227-8582.788Notamacropus_eugenii
ENSEASG00005013089DDX4210095.736ENSOPRG00000014960DDX4210095.736Ochotona_princeps
ENSEASG00005013089DDX4210093.590ENSODEG00000007810DDX4210093.590Octodon_degus
ENSEASG00005013089DDX429480.896ENSONIG00000000734ddx4210072.174Oreochromis_niloticus
ENSEASG00005013089DDX427692.022ENSOANG00000000265DDX4210092.393Ornithorhynchus_anatinus
ENSEASG00005013089DDX429997.143ENSOCUG00000004304DDX428896.521Oryctolagus_cuniculus
ENSEASG00005013089DDX428982.726ENSORLG00000002395ddx4210072.155Oryzias_latipes
ENSEASG00005013089DDX428983.043ENSORLG00020011621ddx4210071.982Oryzias_latipes_hni
ENSEASG00005013089DDX428982.884ENSORLG00015004487ddx4210071.895Oryzias_latipes_hsok
ENSEASG00005013089DDX429381.155ENSOMEG00000020093ddx4210071.164Oryzias_melastigma
ENSEASG00005013089DDX4210097.335ENSOGAG00000006872DDX4210097.335Otolemur_garnettii
ENSEASG00005013089DDX429997.290ENSOARG00000013540DDX4210095.886Ovis_aries
ENSEASG00005013089DDX4210096.805ENSPPAG00000007496DDX4210096.805Pan_paniscus
ENSEASG00005013089DDX4210099.037ENSPPRG00000002740DDX4210099.037Panthera_pardus
ENSEASG00005013089DDX4210099.037ENSPTIG00000009932DDX4210099.037Panthera_tigris_altaica
ENSEASG00005013089DDX4210096.805ENSPTRG00000009523DDX4210096.805Pan_troglodytes
ENSEASG00005013089DDX4210096.592ENSPANG00000020990DDX4210096.592Papio_anubis
ENSEASG00005013089DDX428983.228ENSPKIG00000002901ddx4210070.621Paramormyrops_kingsleyae
ENSEASG00005013089DDX429691.983ENSPSIG00000010289DDX429892.118Pelodiscus_sinensis
ENSEASG00005013089DDX429477.341ENSPMGG00000009323ddx4210069.805Periophthalmus_magnuspinnatus
ENSEASG00005013089DDX429997.429ENSPEMG00000006755Ddx4210095.833Peromyscus_maniculatus_bairdii
ENSEASG00005013089DDX428874.961ENSPMAG00000005580ddx4210073.001Petromyzon_marinus
ENSEASG00005013089DDX429994.017ENSPCIG00000009093DDX4210091.640Phascolarctos_cinereus
ENSEASG00005013089DDX429978.255ENSPFOG00000014104ddx429971.459Poecilia_formosa
ENSEASG00005013089DDX429978.112ENSPLAG00000010522ddx4210070.847Poecilia_latipinna
ENSEASG00005013089DDX429978.112ENSPMEG00000010744ddx429971.369Poecilia_mexicana
ENSEASG00005013089DDX429977.682ENSPREG00000009926ddx429970.717Poecilia_reticulata
ENSEASG00005013089DDX4210094.592ENSPPYG00000008531DDX4210094.592Pongo_abelii
ENSEASG00005013089DDX429990.286ENSPCAG00000002474DDX4210091.870Procavia_capensis
ENSEASG00005013089DDX4210088.491ENSPCOG00000001559DDX4210088.491Propithecus_coquereli
ENSEASG00005013089DDX429995.429ENSPVAG00000000160DDX4210093.803Pteropus_vampyrus
ENSEASG00005013089DDX429675.552ENSPNYG00000013954ddx429769.298Pundamilia_nyererei
ENSEASG00005013089DDX428983.307ENSPNAG00000017352ddx4210068.757Pygocentrus_nattereri
ENSEASG00005013089DDX429997.143ENSRNOG00000009474Ddx4210095.722Rattus_norvegicus
ENSEASG00005013089DDX4210096.699ENSRBIG00000004781DDX429997.986Rhinopithecus_bieti
ENSEASG00005013089DDX4210096.699ENSRROG00000029794DDX4210096.699Rhinopithecus_roxellana
ENSEASG00005013089DDX4210097.112ENSSBOG00000029624DDX4210097.112Saimiri_boliviensis_boliviensis
ENSEASG00005013089DDX427864.364ENSSHAG00000007919-9960.534Sarcophilus_harrisii
ENSEASG00005013089DDX429994.302ENSSHAG00000012896-10091.852Sarcophilus_harrisii
ENSEASG00005013089DDX429083.489ENSSFOG00015014064ddx428181.735Scleropages_formosus
ENSEASG00005013089DDX429480.723ENSSMAG00000009077ddx4210071.825Scophthalmus_maximus
ENSEASG00005013089DDX429479.674ENSSDUG00000022221ddx4210071.957Seriola_dumerili
ENSEASG00005013089DDX429479.580ENSSLDG00000018483ddx4210071.070Seriola_lalandi_dorsalis
ENSEASG00005013089DDX4210096.791ENSSARG00000009847DDX4210096.791Sorex_araneus
ENSEASG00005013089DDX429990.612ENSSPUG00000018806DDX4210084.452Sphenodon_punctatus
ENSEASG00005013089DDX429480.717ENSSPAG00000013055ddx4210072.144Stegastes_partitus
ENSEASG00005013089DDX429897.968ENSSSCG00000017289DDX429796.154Sus_scrofa
ENSEASG00005013089DDX429991.404ENSTGUG00000001931DDX4210083.841Taeniopygia_guttata
ENSEASG00005013089DDX429379.576ENSTRUG00000010711ddx429981.333Takifugu_rubripes
ENSEASG00005013089DDX429093.564ENSTBEG00000010159DDX4210093.955Tupaia_belangeri
ENSEASG00005013089DDX4210097.863ENSTTRG00000006962DDX4210097.863Tursiops_truncatus
ENSEASG00005013089DDX4210097.650ENSUAMG00000007321DDX4210097.650Ursus_americanus
ENSEASG00005013089DDX429998.143ENSUMAG00000017438DDX4210096.795Ursus_maritimus
ENSEASG00005013089DDX429599.301ENSVPAG00000009633DDX429399.301Vicugna_pacos
ENSEASG00005013089DDX4210098.503ENSVVUG00000006095DDX4210098.503Vulpes_vulpes
ENSEASG00005013089DDX429981.792ENSXETG00000003245ddx4210075.362Xenopus_tropicalis
ENSEASG00005013089DDX429578.190ENSXCOG00000017560ddx429770.964Xiphophorus_couchianus
ENSEASG00005013089DDX429381.241ENSXMAG00000008138ddx429971.928Xiphophorus_maculatus

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