EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005013270 (Gene tree)
Gene ID: -
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 111728 bases
Position: chrPSZQ01006131.1:5935658-6047385
Accession: 18734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005019309	rRNA_proc-arch	PF13234.6	1.6e-87	1	1
ENSEASP00005019315	rRNA_proc-arch	PF13234.6	2.2e-67	1	2
ENSEASP00005019315	rRNA_proc-arch	PF13234.6	2.2e-67	2	2
ENSEASP00005019323	rRNA_proc-arch	PF13234.6	3.3e-59	1	1
ENSEASP00005019323	DEAD	PF00270.29	9.3e-17	1	1
ENSEASP00005019315	DEAD	PF00270.29	9.7e-17	1	1
ENSEASP00005019309	DEAD	PF00270.29	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005020954	MTREX-201	3129	-	ENSEASP00005019309	1042 (aa)	-	UPI00071A3E8B
ENSEAST00005020969	MTREX-203	2940	-	ENSEASP00005019323	979 (aa)	-	-
ENSEAST00005020960	MTREX-202	3018	-	ENSEASP00005019315	1005 (aa)	-	-

Gene Model

Click here to download ENSEASG00005013270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005013270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005013270	MTREX	87	41.789	ENSEASG00005015534	SKIV2L	81	36.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005013270	MTREX	100	98.081	ENSG00000039123	MTREX	100	98.081	Homo_sapiens
ENSEASG00005013270	MTREX	100	83.048	ENSAPOG00000007814	mtrex	100	83.111	Acanthochromis_polyacanthus
ENSEASG00005013270	MTREX	100	98.466	ENSAMEG00000013856	MTREX	100	98.466	Ailuropoda_melanoleuca
ENSEASG00005013270	MTREX	91	87.866	ENSACIG00000015117	mtrex	96	87.866	Amphilophus_citrinellus
ENSEASG00005013270	MTREX	100	83.048	ENSAOCG00000011884	mtrex	100	83.206	Amphiprion_ocellaris
ENSEASG00005013270	MTREX	100	83.048	ENSAPEG00000019384	mtrex	100	83.111	Amphiprion_percula
ENSEASG00005013270	MTREX	100	83.889	ENSATEG00000015117	mtrex	100	83.668	Anabas_testudineus
ENSEASG00005013270	MTREX	95	92.540	ENSAPLG00000009694	MTREX	99	92.540	Anas_platyrhynchos
ENSEASG00005013270	MTREX	100	91.171	ENSACAG00000015200	MTREX	96	90.979	Anolis_carolinensis
ENSEASG00005013270	MTREX	100	98.177	ENSANAG00000023095	MTREX	100	98.177	Aotus_nancymaae
ENSEASG00005013270	MTREX	100	82.745	ENSACLG00000001921	mtrex	100	82.650	Astatotilapia_calliptera
ENSEASG00005013270	MTREX	97	81.845	ENSAMXG00000018751	mtrex	99	83.835	Astyanax_mexicanus
ENSEASG00005013270	MTREX	100	98.177	ENSBTAG00000010518	MTREX	100	98.177	Bos_taurus
ENSEASG00005013270	MTREX	91	53.523	WBGene00012342	mtr-4	98	51.929	Caenorhabditis_elegans
ENSEASG00005013270	MTREX	100	97.137	ENSCJAG00000001773	MTREX	100	97.137	Callithrix_jacchus
ENSEASG00005013270	MTREX	100	98.560	ENSCAFG00000006818	MTREX	100	98.560	Canis_familiaris
ENSEASG00005013270	MTREX	100	98.560	ENSCAFG00020024352	MTREX	100	98.560	Canis_lupus_dingo
ENSEASG00005013270	MTREX	100	98.308	ENSCHIG00000024413	MTREX	100	98.308	Capra_hircus
ENSEASG00005013270	MTREX	94	97.666	ENSTSYG00000007389	MTREX	100	97.666	Carlito_syrichta
ENSEASG00005013270	MTREX	96	73.246	ENSCAPG00000008696	MTREX	100	73.246	Cavia_aperea
ENSEASG00005013270	MTREX	100	97.793	ENSCPOG00000009797	MTREX	100	97.793	Cavia_porcellus
ENSEASG00005013270	MTREX	100	98.177	ENSCCAG00000014177	MTREX	100	98.177	Cebus_capucinus
ENSEASG00005013270	MTREX	100	97.889	ENSCATG00000042153	MTREX	100	97.889	Cercocebus_atys
ENSEASG00005013270	MTREX	100	97.409	ENSCLAG00000006622	MTREX	100	97.409	Chinchilla_lanigera
ENSEASG00005013270	MTREX	100	93.397	ENSCSAG00000016445	MTREX	100	93.397	Chlorocebus_sabaeus
ENSEASG00005013270	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSEASG00005013270	MTREX	100	92.426	ENSCPBG00000026551	MTREX	94	92.426	Chrysemys_picta_bellii
ENSEASG00005013270	MTREX	99	66.252	ENSCING00000003239	-	99	66.061	Ciona_intestinalis
ENSEASG00005013270	MTREX	99	69.507	ENSCSAVG00000009304	-	100	69.892	Ciona_savignyi
ENSEASG00005013270	MTREX	100	97.793	ENSCANG00000035770	MTREX	100	97.793	Colobus_angolensis_palliatus
ENSEASG00005013270	MTREX	100	97.217	ENSCGRG00001024680	Mtrex	100	97.217	Cricetulus_griseus_chok1gshd
ENSEASG00005013270	MTREX	100	97.217	ENSCGRG00000000307	Mtrex	100	97.217	Cricetulus_griseus_crigri
ENSEASG00005013270	MTREX	100	81.362	ENSCSEG00000018621	mtrex	98	81.948	Cynoglossus_semilaevis
ENSEASG00005013270	MTREX	100	83.603	ENSCVAG00000004556	mtrex	100	83.238	Cyprinodon_variegatus
ENSEASG00005013270	MTREX	100	84.718	ENSDARG00000013457	mtrex	100	84.527	Danio_rerio
ENSEASG00005013270	MTREX	100	96.654	ENSDNOG00000015375	MTREX	100	96.654	Dasypus_novemcinctus
ENSEASG00005013270	MTREX	100	97.505	ENSDORG00000006782	Mtrex	100	97.505	Dipodomys_ordii
ENSEASG00005013270	MTREX	99	62.488	FBgn0001986	Mtr4	99	62.559	Drosophila_melanogaster
ENSEASG00005013270	MTREX	96	80.330	ENSETEG00000000727	MTREX	90	79.505	Echinops_telfairi
ENSEASG00005013270	MTREX	99	74.495	ENSEBUG00000012869	mtrex	99	74.544	Eptatretus_burgeri
ENSEASG00005013270	MTREX	100	99.904	ENSECAG00000023723	MTREX	100	100.000	Equus_caballus
ENSEASG00005013270	MTREX	98	88.976	ENSEEUG00000000527	MTREX	100	88.976	Erinaceus_europaeus
ENSEASG00005013270	MTREX	98	85.257	ENSELUG00000004898	mtrex	100	89.496	Esox_lucius
ENSEASG00005013270	MTREX	100	98.369	ENSFCAG00000010575	MTREX	100	98.369	Felis_catus
ENSEASG00005013270	MTREX	100	90.403	ENSFALG00000010850	MTREX	100	90.307	Ficedula_albicollis
ENSEASG00005013270	MTREX	100	96.833	ENSFDAG00000011199	MTREX	100	96.833	Fukomys_damarensis
ENSEASG00005013270	MTREX	100	83.603	ENSFHEG00000023014	mtrex	100	82.538	Fundulus_heteroclitus
ENSEASG00005013270	MTREX	100	79.676	ENSGMOG00000014702	mtrex	100	79.962	Gadus_morhua
ENSEASG00005013270	MTREX	100	91.363	ENSGALG00000014709	MTREX	86	91.196	Gallus_gallus
ENSEASG00005013270	MTREX	100	83.794	ENSGAFG00000012425	mtrex	98	87.293	Gambusia_affinis
ENSEASG00005013270	MTREX	100	79.274	ENSGACG00000016260	mtrex	96	85.217	Gasterosteus_aculeatus
ENSEASG00005013270	MTREX	100	92.138	ENSGAGG00000020036	MTREX	100	91.755	Gopherus_agassizii
ENSEASG00005013270	MTREX	100	98.177	ENSGGOG00000001867	MTREX	100	98.177	Gorilla_gorilla
ENSEASG00005013270	MTREX	100	82.745	ENSHBUG00000006229	mtrex	100	82.650	Haplochromis_burtoni
ENSEASG00005013270	MTREX	100	97.217	ENSHGLG00000019445	SKIV2L2	100	97.217	Heterocephalus_glaber_female
ENSEASG00005013270	MTREX	100	97.217	ENSHGLG00100011833	SKIV2L2	100	97.217	Heterocephalus_glaber_male
ENSEASG00005013270	MTREX	91	84.623	ENSHCOG00000019995	mtrex	100	84.623	Hippocampus_comes
ENSEASG00005013270	MTREX	100	85.387	ENSIPUG00000024348	skiv2l2	100	85.564	Ictalurus_punctatus
ENSEASG00005013270	MTREX	100	98.081	ENSSTOG00000010802	MTREX	100	98.081	Ictidomys_tridecemlineatus
ENSEASG00005013270	MTREX	100	90.115	ENSJJAG00000020975	Mtrex	100	90.403	Jaculus_jaculus
ENSEASG00005013270	MTREX	100	82.745	ENSKMAG00000012642	mtrex	100	82.713	Kryptolebias_marmoratus
ENSEASG00005013270	MTREX	100	83.429	ENSLBEG00000019367	mtrex	99	86.027	Labrus_bergylta
ENSEASG00005013270	MTREX	100	88.697	ENSLACG00000009075	MTREX	100	88.410	Latimeria_chalumnae
ENSEASG00005013270	MTREX	100	87.165	ENSLOCG00000010186	mtrex	100	86.877	Lepisosteus_oculatus
ENSEASG00005013270	MTREX	99	95.489	ENSLAFG00000010497	MTREX	100	95.489	Loxodonta_africana
ENSEASG00005013270	MTREX	100	97.889	ENSMFAG00000031610	MTREX	100	97.889	Macaca_fascicularis
ENSEASG00005013270	MTREX	100	96.648	ENSMMUG00000010379	MTREX	100	96.648	Macaca_mulatta
ENSEASG00005013270	MTREX	100	97.889	ENSMNEG00000032746	MTREX	100	97.889	Macaca_nemestrina
ENSEASG00005013270	MTREX	100	97.889	ENSMLEG00000041051	MTREX	100	97.889	Mandrillus_leucophaeus
ENSEASG00005013270	MTREX	100	82.426	ENSMAMG00000016753	mtrex	96	88.401	Mastacembelus_armatus
ENSEASG00005013270	MTREX	100	82.745	ENSMZEG00005000414	mtrex	100	82.650	Maylandia_zebra
ENSEASG00005013270	MTREX	91	72.581	ENSMGAG00000003980	MTREX	100	67.543	Meleagris_gallopavo
ENSEASG00005013270	MTREX	100	96.929	ENSMAUG00000010727	Mtrex	100	96.929	Mesocricetus_auratus
ENSEASG00005013270	MTREX	100	98.560	ENSMICG00000012779	MTREX	100	98.560	Microcebus_murinus
ENSEASG00005013270	MTREX	100	96.929	ENSMOCG00000019886	Mtrex	100	96.929	Microtus_ochrogaster
ENSEASG00005013270	MTREX	100	81.584	ENSMMOG00000002476	mtrex	100	81.775	Mola_mola
ENSEASG00005013270	MTREX	100	93.282	ENSMODG00000019494	MTREX	100	93.206	Monodelphis_domestica
ENSEASG00005013270	MTREX	92	82.395	ENSMALG00000002917	mtrex	99	82.395	Monopterus_albus
ENSEASG00005013270	MTREX	100	96.545	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.545	Mus_caroli
ENSEASG00005013270	MTREX	100	96.737	ENSMUSG00000016018	Mtrex	100	96.737	Mus_musculus
ENSEASG00005013270	MTREX	100	96.545	MGP_PahariEiJ_G0015967	Mtrex	100	96.545	Mus_pahari
ENSEASG00005013270	MTREX	100	96.737	MGP_SPRETEiJ_G0019775	Mtrex	100	96.737	Mus_spretus
ENSEASG00005013270	MTREX	100	98.752	ENSMPUG00000007619	MTREX	100	98.752	Mustela_putorius_furo
ENSEASG00005013270	MTREX	100	96.555	ENSMLUG00000001152	MTREX	100	96.555	Myotis_lucifugus
ENSEASG00005013270	MTREX	100	97.409	ENSNGAG00000011938	Mtrex	100	97.409	Nannospalax_galili
ENSEASG00005013270	MTREX	100	82.841	ENSNBRG00000011293	mtrex	100	82.745	Neolamprologus_brichardi
ENSEASG00005013270	MTREX	100	93.966	ENSNLEG00000001494	MTREX	100	93.966	Nomascus_leucogenys
ENSEASG00005013270	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSEASG00005013270	MTREX	100	81.574	ENSOPRG00000008009	MTREX	100	82.150	Ochotona_princeps
ENSEASG00005013270	MTREX	100	96.737	ENSODEG00000017234	MTREX	100	96.737	Octodon_degus
ENSEASG00005013270	MTREX	100	82.555	ENSONIG00000007587	mtrex	100	82.459	Oreochromis_niloticus
ENSEASG00005013270	MTREX	100	98.081	ENSOCUG00000004463	MTREX	100	98.081	Oryctolagus_cuniculus
ENSEASG00005013270	MTREX	100	82.841	ENSORLG00000005443	mtrex	100	82.713	Oryzias_latipes
ENSEASG00005013270	MTREX	100	82.745	ENSORLG00020006329	mtrex	100	82.617	Oryzias_latipes_hni
ENSEASG00005013270	MTREX	100	82.713	ENSORLG00015012924	mtrex	100	82.713	Oryzias_latipes_hsok
ENSEASG00005013270	MTREX	100	82.129	ENSOMEG00000008825	mtrex	100	81.905	Oryzias_melastigma
ENSEASG00005013270	MTREX	100	97.985	ENSOGAG00000002886	MTREX	100	97.985	Otolemur_garnettii
ENSEASG00005013270	MTREX	100	97.990	ENSOARG00000007764	MTREX	100	97.990	Ovis_aries
ENSEASG00005013270	MTREX	100	98.081	ENSPPAG00000039291	MTREX	100	98.081	Pan_paniscus
ENSEASG00005013270	MTREX	100	98.369	ENSPPRG00000019701	MTREX	100	98.369	Panthera_pardus
ENSEASG00005013270	MTREX	100	96.929	ENSPTIG00000009313	MTREX	100	96.929	Panthera_tigris_altaica
ENSEASG00005013270	MTREX	100	98.081	ENSPTRG00000016878	MTREX	100	98.081	Pan_troglodytes
ENSEASG00005013270	MTREX	100	97.793	ENSPANG00000009697	MTREX	100	97.793	Papio_anubis
ENSEASG00005013270	MTREX	100	86.628	ENSPKIG00000020833	mtrex	99	87.691	Paramormyrops_kingsleyae
ENSEASG00005013270	MTREX	100	92.234	ENSPSIG00000012150	MTREX	100	92.234	Pelodiscus_sinensis
ENSEASG00005013270	MTREX	100	81.030	ENSPMGG00000002582	mtrex	100	81.030	Periophthalmus_magnuspinnatus
ENSEASG00005013270	MTREX	95	68.407	ENSPMAG00000009668	mtrex	100	65.763	Petromyzon_marinus
ENSEASG00005013270	MTREX	91	96.621	ENSPCIG00000024730	MTREX	100	96.621	Phascolarctos_cinereus
ENSEASG00005013270	MTREX	75	87.326	ENSPFOG00000003141	mtrex	100	87.563	Poecilia_formosa
ENSEASG00005013270	MTREX	100	83.699	ENSPLAG00000021311	mtrex	100	83.492	Poecilia_latipinna
ENSEASG00005013270	MTREX	91	87.605	ENSPMEG00000010597	mtrex	99	87.920	Poecilia_mexicana
ENSEASG00005013270	MTREX	100	83.413	ENSPREG00000003089	mtrex	100	83.206	Poecilia_reticulata
ENSEASG00005013270	MTREX	98	98.146	ENSPPYG00000015469	MTREX	98	98.146	Pongo_abelii
ENSEASG00005013270	MTREX	100	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
ENSEASG00005013270	MTREX	99	92.114	ENSPCOG00000018092	MTREX	100	92.008	Propithecus_coquereli
ENSEASG00005013270	MTREX	100	98.656	ENSPVAG00000002445	MTREX	100	98.656	Pteropus_vampyrus
ENSEASG00005013270	MTREX	100	82.650	ENSPNYG00000006164	mtrex	100	82.555	Pundamilia_nyererei
ENSEASG00005013270	MTREX	100	85.864	ENSPNAG00000008794	mtrex	100	85.864	Pygocentrus_nattereri
ENSEASG00005013270	MTREX	99	96.501	ENSRNOG00000010125	Mtrex	97	96.501	Rattus_norvegicus
ENSEASG00005013270	MTREX	100	96.161	ENSRBIG00000034930	MTREX	100	96.161	Rhinopithecus_bieti
ENSEASG00005013270	MTREX	100	97.889	ENSRROG00000039895	MTREX	100	97.889	Rhinopithecus_roxellana
ENSEASG00005013270	MTREX	88	57.101	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSEASG00005013270	MTREX	100	97.985	ENSSBOG00000026693	MTREX	100	97.985	Saimiri_boliviensis_boliviensis
ENSEASG00005013270	MTREX	96	95.386	ENSSHAG00000004600	MTREX	100	95.386	Sarcophilus_harrisii
ENSEASG00005013270	MTREX	100	86.998	ENSSFOG00015014355	skiv2l2	100	86.998	Scleropages_formosus
ENSEASG00005013270	MTREX	100	82.952	ENSSMAG00000007572	mtrex	100	82.745	Scophthalmus_maximus
ENSEASG00005013270	MTREX	100	83.588	ENSSDUG00000023789	mtrex	100	83.492	Seriola_dumerili
ENSEASG00005013270	MTREX	100	83.492	ENSSLDG00000006301	mtrex	100	83.397	Seriola_lalandi_dorsalis
ENSEASG00005013270	MTREX	100	94.338	ENSSARG00000008387	MTREX	100	94.338	Sorex_araneus
ENSEASG00005013270	MTREX	100	79.770	ENSSPUG00000007071	MTREX	100	79.770	Sphenodon_punctatus
ENSEASG00005013270	MTREX	91	87.290	ENSSPAG00000011319	mtrex	94	87.815	Stegastes_partitus
ENSEASG00005013270	MTREX	100	98.752	ENSSSCG00000016911	MTREX	100	98.752	Sus_scrofa
ENSEASG00005013270	MTREX	100	90.221	ENSTGUG00000002480	MTREX	100	90.221	Taeniopygia_guttata
ENSEASG00005013270	MTREX	100	82.667	ENSTRUG00000014571	mtrex	100	82.555	Takifugu_rubripes
ENSEASG00005013270	MTREX	100	81.766	ENSTBEG00000007769	MTREX	100	81.766	Tupaia_belangeri
ENSEASG00005013270	MTREX	100	98.081	ENSTTRG00000008678	MTREX	100	98.081	Tursiops_truncatus
ENSEASG00005013270	MTREX	100	98.369	ENSUAMG00000023061	MTREX	100	98.369	Ursus_americanus
ENSEASG00005013270	MTREX	100	97.797	ENSUMAG00000009373	MTREX	99	99.540	Ursus_maritimus
ENSEASG00005013270	MTREX	94	100.000	ENSVPAG00000011174	MTREX	89	100.000	Vicugna_pacos
ENSEASG00005013270	MTREX	100	98.752	ENSVVUG00000021337	MTREX	100	98.752	Vulpes_vulpes
ENSEASG00005013270	MTREX	100	88.686	ENSXETG00000032798	MTREX	100	88.686	Xenopus_tropicalis
ENSEASG00005013270	MTREX	100	83.413	ENSXMAG00000004799	mtrex	100	83.190	Xiphophorus_maculatus