EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005014160 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 6201 bases
Position: chrPSZQ01000897.1:78573150-78579350
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005020574	PseudoU_synth_2	PF00849.22	6.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005022341	RPUSD3-201	1083	-	ENSEASP00005020574	360 (aa)	-	-

Gene Model

Click here to download ENSEASG00005014160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005014160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005014160	RPUSD3	76	32.056	ENSEASG00005022982	RPUSD4	71	32.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005014160	RPUSD3	97	81.662	ENSG00000156990	RPUSD3	99	81.662	Homo_sapiens
ENSEASG00005014160	RPUSD3	98	82.955	ENSAMEG00000016227	RPUSD3	100	82.955	Ailuropoda_melanoleuca
ENSEASG00005014160	RPUSD3	78	54.093	ENSACAG00000009836	RPUSD3	80	54.093	Anolis_carolinensis
ENSEASG00005014160	RPUSD3	53	80.952	ENSANAG00000038118	-	90	80.952	Aotus_nancymaae
ENSEASG00005014160	RPUSD3	76	59.930	ENSANAG00000007127	-	98	59.930	Aotus_nancymaae
ENSEASG00005014160	RPUSD3	67	70.954	ENSANAG00000019945	-	90	70.954	Aotus_nancymaae
ENSEASG00005014160	RPUSD3	96	79.942	ENSBTAG00000007968	RPUSD3	100	79.942	Bos_taurus
ENSEASG00005014160	RPUSD3	98	82.386	ENSCAFG00000029733	RPUSD3	100	82.386	Canis_familiaris
ENSEASG00005014160	RPUSD3	98	82.386	ENSCAFG00020008582	RPUSD3	100	82.386	Canis_lupus_dingo
ENSEASG00005014160	RPUSD3	96	78.779	ENSCHIG00000026027	RPUSD3	100	78.779	Capra_hircus
ENSEASG00005014160	RPUSD3	96	74.425	ENSTSYG00000009994	RPUSD3	97	75.367	Carlito_syrichta
ENSEASG00005014160	RPUSD3	73	80.608	ENSCAPG00000017559	RPUSD3	99	80.608	Cavia_aperea
ENSEASG00005014160	RPUSD3	73	80.303	ENSCPOG00000037956	RPUSD3	92	66.952	Cavia_porcellus
ENSEASG00005014160	RPUSD3	97	79.656	ENSCCAG00000029530	RPUSD3	100	79.261	Cebus_capucinus
ENSEASG00005014160	RPUSD3	97	81.662	ENSCATG00000036939	RPUSD3	99	81.662	Cercocebus_atys
ENSEASG00005014160	RPUSD3	97	81.375	ENSCSAG00000010506	RPUSD3	100	80.966	Chlorocebus_sabaeus
ENSEASG00005014160	RPUSD3	71	55.253	ENSCPBG00000008825	RPUSD3	84	56.109	Chrysemys_picta_bellii
ENSEASG00005014160	RPUSD3	97	81.375	ENSCANG00000040711	RPUSD3	100	80.966	Colobus_angolensis_palliatus
ENSEASG00005014160	RPUSD3	97	73.143	ENSCGRG00001004923	Rpusd3	97	73.143	Cricetulus_griseus_chok1gshd
ENSEASG00005014160	RPUSD3	93	74.487	ENSCGRG00000018315	Rpusd3	99	74.487	Cricetulus_griseus_crigri
ENSEASG00005014160	RPUSD3	98	74.359	ENSDNOG00000039160	RPUSD3	93	74.359	Dasypus_novemcinctus
ENSEASG00005014160	RPUSD3	72	77.239	ENSDORG00000026827	Rpusd3	92	77.239	Dipodomys_ordii
ENSEASG00005014160	RPUSD3	98	74.716	ENSETEG00000006538	RPUSD3	99	74.716	Echinops_telfairi
ENSEASG00005014160	RPUSD3	60	36.726	ENSEBUG00000015605	RPUSD3	74	36.726	Eptatretus_burgeri
ENSEASG00005014160	RPUSD3	100	97.500	ENSECAG00000019988	RPUSD3	100	97.500	Equus_caballus
ENSEASG00005014160	RPUSD3	92	61.310	ENSEEUG00000007353	RPUSD3	95	61.310	Erinaceus_europaeus
ENSEASG00005014160	RPUSD3	98	82.102	ENSFCAG00000014199	RPUSD3	100	82.102	Felis_catus
ENSEASG00005014160	RPUSD3	75	48.162	ENSFALG00000012968	RPUSD3	85	48.908	Ficedula_albicollis
ENSEASG00005014160	RPUSD3	74	79.623	ENSFDAG00000008350	RPUSD3	82	79.623	Fukomys_damarensis
ENSEASG00005014160	RPUSD3	73	56.654	ENSGAGG00000007493	RPUSD3	73	57.709	Gopherus_agassizii
ENSEASG00005014160	RPUSD3	97	81.375	ENSGGOG00000013120	RPUSD3	99	81.375	Gorilla_gorilla
ENSEASG00005014160	RPUSD3	78	79.286	ENSHGLG00000011722	RPUSD3	72	79.286	Heterocephalus_glaber_female
ENSEASG00005014160	RPUSD3	78	79.286	ENSHGLG00100016038	RPUSD3	72	79.286	Heterocephalus_glaber_male
ENSEASG00005014160	RPUSD3	98	76.989	ENSSTOG00000002125	RPUSD3	100	76.989	Ictidomys_tridecemlineatus
ENSEASG00005014160	RPUSD3	96	71.802	ENSJJAG00000012679	Rpusd3	100	71.802	Jaculus_jaculus
ENSEASG00005014160	RPUSD3	96	79.360	ENSLAFG00000017501	RPUSD3	100	79.360	Loxodonta_africana
ENSEASG00005014160	RPUSD3	97	80.802	ENSMFAG00000032407	RPUSD3	99	80.802	Macaca_fascicularis
ENSEASG00005014160	RPUSD3	97	76.791	ENSMMUG00000010628	RPUSD3	96	84.142	Macaca_mulatta
ENSEASG00005014160	RPUSD3	97	80.516	ENSMNEG00000040308	RPUSD3	99	80.516	Macaca_nemestrina
ENSEASG00005014160	RPUSD3	97	81.375	ENSMLEG00000033940	RPUSD3	99	81.375	Mandrillus_leucophaeus
ENSEASG00005014160	RPUSD3	96	73.699	ENSMAUG00000015473	Rpusd3	100	73.699	Mesocricetus_auratus
ENSEASG00005014160	RPUSD3	96	79.360	ENSMICG00000002315	RPUSD3	100	79.360	Microcebus_murinus
ENSEASG00005014160	RPUSD3	96	72.965	ENSMOCG00000022613	Rpusd3	100	72.965	Microtus_ochrogaster
ENSEASG00005014160	RPUSD3	93	55.490	ENSMODG00000005210	RPUSD3	77	55.290	Monodelphis_domestica
ENSEASG00005014160	RPUSD3	96	73.256	MGP_CAROLIEiJ_G0028725	Rpusd3	100	73.256	Mus_caroli
ENSEASG00005014160	RPUSD3	96	73.547	ENSMUSG00000051169	Rpusd3	100	73.547	Mus_musculus
ENSEASG00005014160	RPUSD3	96	72.965	MGP_PahariEiJ_G0022476	Rpusd3	100	72.965	Mus_pahari
ENSEASG00005014160	RPUSD3	96	72.965	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.965	Mus_spretus
ENSEASG00005014160	RPUSD3	98	79.261	ENSMPUG00000017132	RPUSD3	100	79.261	Mustela_putorius_furo
ENSEASG00005014160	RPUSD3	96	82.948	ENSMLUG00000006135	RPUSD3	99	82.948	Myotis_lucifugus
ENSEASG00005014160	RPUSD3	95	73.021	ENSNGAG00000023704	Rpusd3	99	73.021	Nannospalax_galili
ENSEASG00005014160	RPUSD3	97	68.481	ENSNLEG00000004214	RPUSD3	94	83.582	Nomascus_leucogenys
ENSEASG00005014160	RPUSD3	72	63.985	ENSMEUG00000013098	-	84	66.055	Notamacropus_eugenii
ENSEASG00005014160	RPUSD3	93	62.722	ENSOPRG00000002300	RPUSD3	96	62.722	Ochotona_princeps
ENSEASG00005014160	RPUSD3	73	79.167	ENSODEG00000018137	RPUSD3	91	79.167	Octodon_degus
ENSEASG00005014160	RPUSD3	79	49.296	ENSOANG00000012081	-	84	50.000	Ornithorhynchus_anatinus
ENSEASG00005014160	RPUSD3	96	66.573	ENSOCUG00000027885	RPUSD3	100	66.573	Oryctolagus_cuniculus
ENSEASG00005014160	RPUSD3	87	80.892	ENSOGAG00000012592	RPUSD3	100	80.892	Otolemur_garnettii
ENSEASG00005014160	RPUSD3	98	79.772	ENSOARG00000005928	RPUSD3	99	79.772	Ovis_aries
ENSEASG00005014160	RPUSD3	98	81.250	ENSPPAG00000038083	RPUSD3	100	81.250	Pan_paniscus
ENSEASG00005014160	RPUSD3	98	83.239	ENSPPRG00000024433	RPUSD3	100	83.239	Panthera_pardus
ENSEASG00005014160	RPUSD3	96	84.012	ENSPTIG00000006828	RPUSD3	100	84.012	Panthera_tigris_altaica
ENSEASG00005014160	RPUSD3	98	80.966	ENSPTRG00000051760	RPUSD3	100	80.966	Pan_troglodytes
ENSEASG00005014160	RPUSD3	97	81.375	ENSPANG00000023885	RPUSD3	100	80.966	Papio_anubis
ENSEASG00005014160	RPUSD3	96	74.128	ENSPEMG00000017245	Rpusd3	100	74.128	Peromyscus_maniculatus_bairdii
ENSEASG00005014160	RPUSD3	95	57.185	ENSPCIG00000021901	RPUSD3	84	57.823	Phascolarctos_cinereus
ENSEASG00005014160	RPUSD3	98	80.398	ENSPPYG00000013676	RPUSD3	100	80.398	Pongo_abelii
ENSEASG00005014160	RPUSD3	80	61.592	ENSPCAG00000013731	-	100	61.592	Procavia_capensis
ENSEASG00005014160	RPUSD3	98	82.102	ENSPCOG00000018314	RPUSD3	100	82.102	Propithecus_coquereli
ENSEASG00005014160	RPUSD3	98	79.545	ENSPVAG00000011107	RPUSD3	100	79.545	Pteropus_vampyrus
ENSEASG00005014160	RPUSD3	96	68.314	ENSRNOG00000009084	Rpusd3	100	68.314	Rattus_norvegicus
ENSEASG00005014160	RPUSD3	97	81.948	ENSRBIG00000041230	RPUSD3	99	81.948	Rhinopithecus_bieti
ENSEASG00005014160	RPUSD3	97	81.948	ENSRROG00000043328	RPUSD3	99	81.948	Rhinopithecus_roxellana
ENSEASG00005014160	RPUSD3	97	79.656	ENSSBOG00000036106	RPUSD3	99	79.656	Saimiri_boliviensis_boliviensis
ENSEASG00005014160	RPUSD3	86	58.442	ENSSHAG00000015536	RPUSD3	86	58.491	Sarcophilus_harrisii
ENSEASG00005014160	RPUSD3	98	80.114	ENSSSCG00000011555	RPUSD3	100	80.114	Sus_scrofa
ENSEASG00005014160	RPUSD3	60	51.152	ENSTGUG00000008744	RPUSD3	93	51.152	Taeniopygia_guttata
ENSEASG00005014160	RPUSD3	80	76.471	ENSTBEG00000000176	RPUSD3	100	76.471	Tupaia_belangeri
ENSEASG00005014160	RPUSD3	98	81.250	ENSTTRG00000007544	RPUSD3	100	81.250	Tursiops_truncatus
ENSEASG00005014160	RPUSD3	87	85.350	ENSUAMG00000011354	RPUSD3	98	85.350	Ursus_americanus
ENSEASG00005014160	RPUSD3	98	83.523	ENSUMAG00000018830	RPUSD3	100	83.523	Ursus_maritimus
ENSEASG00005014160	RPUSD3	96	83.430	ENSVVUG00000023735	RPUSD3	100	83.430	Vulpes_vulpes
ENSEASG00005014160	RPUSD3	78	50.355	ENSXETG00000023546	rpusd3	99	50.355	Xenopus_tropicalis