EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005014396 (Gene tree)
Gene ID: -
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 1149 bases
Position: chrPSZQ01003936.1:22717-23865
Accession: 13629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005021030	RRM_5	PF13893.6	1e-11	1	2
ENSEASP00005021030	RRM_5	PF13893.6	1e-11	2	2
ENSEASP00005021030	RRM_1	PF00076.22	7e-78	1	4
ENSEASP00005021030	RRM_1	PF00076.22	7e-78	2	4
ENSEASP00005021030	RRM_1	PF00076.22	7e-78	3	4
ENSEASP00005021030	RRM_1	PF00076.22	7e-78	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005022818	PABPC5-201	1149	-	ENSEASP00005021030	382 (aa)	-	UPI0001797D6D

Gene Model

Click here to download ENSEASG00005014396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005014396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005014396	PABPC5	97	64.420	ENSEASG00005002810	PABPC1	58	65.449
ENSEASG00005014396	PABPC5	87	64.596	ENSEASG00005023408	-	95	64.935
ENSEASG00005014396	PABPC5	74	60.504	ENSEASG00005023407	-	51	60.504
ENSEASG00005014396	PABPC5	97	42.368	ENSEASG00005014126	-	68	36.150
ENSEASG00005014396	PABPC5	96	62.363	ENSEASG00005007883	PABPC4L	98	62.360
ENSEASG00005014396	PABPC5	96	57.971	ENSEASG00005010399	-	93	59.896
ENSEASG00005014396	PABPC5	94	35.802	ENSEASG00005004697	ELAVL2	82	35.802
ENSEASG00005014396	PABPC5	95	67.769	ENSEASG00005014119	PABPC4	56	67.978

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005014396	PABPC5	99	97.638	ENSG00000174740	PABPC5	99	97.638	Homo_sapiens
ENSEASG00005014396	PABPC5	99	98.163	ENSAMEG00000020114	PABPC5	100	98.163	Ailuropoda_melanoleuca
ENSEASG00005014396	PABPC5	99	97.638	ENSANAG00000005063	PABPC5	99	97.638	Aotus_nancymaae
ENSEASG00005014396	PABPC5	100	97.120	ENSBTAG00000019942	PABPC5	100	97.120	Bos_taurus
ENSEASG00005014396	PABPC5	99	97.113	ENSCJAG00000003665	PABPC5	99	97.113	Callithrix_jacchus
ENSEASG00005014396	PABPC5	100	97.644	ENSCAFG00000017452	PABPC5	100	97.644	Canis_familiaris
ENSEASG00005014396	PABPC5	100	97.120	ENSCHIG00000019004	PABPC5	100	97.120	Capra_hircus
ENSEASG00005014396	PABPC5	100	97.120	ENSTSYG00000036351	PABPC5	100	97.120	Carlito_syrichta
ENSEASG00005014396	PABPC5	99	87.958	ENSCAPG00000010714	PABPC5	100	87.958	Cavia_aperea
ENSEASG00005014396	PABPC5	100	94.241	ENSCPOG00000002555	PABPC5	100	94.241	Cavia_porcellus
ENSEASG00005014396	PABPC5	99	97.638	ENSCCAG00000032154	PABPC5	99	97.638	Cebus_capucinus
ENSEASG00005014396	PABPC5	99	97.375	ENSCATG00000043083	PABPC5	99	97.375	Cercocebus_atys
ENSEASG00005014396	PABPC5	100	95.550	ENSCLAG00000000647	PABPC5	100	95.550	Chinchilla_lanigera
ENSEASG00005014396	PABPC5	99	97.375	ENSCSAG00000000065	PABPC5	99	97.375	Chlorocebus_sabaeus
ENSEASG00005014396	PABPC5	99	97.375	ENSCANG00000011473	PABPC5	99	97.375	Colobus_angolensis_palliatus
ENSEASG00005014396	PABPC5	100	93.979	ENSCGRG00000018699	Pabpc5	100	93.979	Cricetulus_griseus_crigri
ENSEASG00005014396	PABPC5	100	78.590	ENSETEG00000011832	PABPC5	100	78.590	Echinops_telfairi
ENSEASG00005014396	PABPC5	100	100.000	ENSECAG00000003452	PABPC5	100	100.000	Equus_caballus
ENSEASG00005014396	PABPC5	100	97.906	ENSFCAG00000004998	PABPC5	100	97.906	Felis_catus
ENSEASG00005014396	PABPC5	100	96.597	ENSFDAG00000000126	PABPC5	100	96.597	Fukomys_damarensis
ENSEASG00005014396	PABPC5	99	97.638	ENSGGOG00000007622	PABPC5	99	97.638	Gorilla_gorilla
ENSEASG00005014396	PABPC5	95	96.330	ENSJJAG00000011960	Pabpc5	100	96.330	Jaculus_jaculus
ENSEASG00005014396	PABPC5	99	97.375	ENSMFAG00000024561	PABPC5	99	97.375	Macaca_fascicularis
ENSEASG00005014396	PABPC5	99	97.375	ENSMMUG00000011562	PABPC5	99	97.375	Macaca_mulatta
ENSEASG00005014396	PABPC5	99	97.375	ENSMNEG00000037604	PABPC5	99	97.375	Macaca_nemestrina
ENSEASG00005014396	PABPC5	99	97.375	ENSMLEG00000028318	PABPC5	99	97.375	Mandrillus_leucophaeus
ENSEASG00005014396	PABPC5	100	96.335	ENSMICG00000041706	PABPC5	100	96.335	Microcebus_murinus
ENSEASG00005014396	PABPC5	100	95.288	ENSMOCG00000001554	Pabpc5	100	95.288	Microtus_ochrogaster
ENSEASG00005014396	PABPC5	99	93.947	MGP_CAROLIEiJ_G0033367	Pabpc5	99	93.947	Mus_caroli
ENSEASG00005014396	PABPC5	99	94.474	ENSMUSG00000034732	Pabpc5	99	94.474	Mus_musculus
ENSEASG00005014396	PABPC5	100	94.764	MGP_PahariEiJ_G0031908	Pabpc5	100	94.764	Mus_pahari
ENSEASG00005014396	PABPC5	99	94.474	MGP_SPRETEiJ_G0034533	Pabpc5	99	94.474	Mus_spretus
ENSEASG00005014396	PABPC5	100	97.120	ENSMPUG00000018465	PABPC5	100	97.120	Mustela_putorius_furo
ENSEASG00005014396	PABPC5	100	96.597	ENSMLUG00000008244	PABPC5	100	96.597	Myotis_lucifugus
ENSEASG00005014396	PABPC5	95	95.413	ENSNGAG00000004371	Pabpc5	100	95.413	Nannospalax_galili
ENSEASG00005014396	PABPC5	99	97.638	ENSNLEG00000035086	PABPC5	99	97.638	Nomascus_leucogenys
ENSEASG00005014396	PABPC5	98	98.190	ENSOPRG00000000856	PABPC5	100	98.190	Ochotona_princeps
ENSEASG00005014396	PABPC5	100	97.382	ENSOCUG00000010919	PABPC5	100	97.382	Oryctolagus_cuniculus
ENSEASG00005014396	PABPC5	100	96.335	ENSOGAG00000006882	PABPC5	100	96.335	Otolemur_garnettii
ENSEASG00005014396	PABPC5	100	97.382	ENSOARG00000010260	PABPC5	100	97.382	Ovis_aries
ENSEASG00005014396	PABPC5	99	97.375	ENSPPAG00000007378	PABPC5	99	97.375	Pan_paniscus
ENSEASG00005014396	PABPC5	100	97.906	ENSPPRG00000010742	PABPC5	100	97.906	Panthera_pardus
ENSEASG00005014396	PABPC5	100	97.906	ENSPTIG00000001480	PABPC5	100	97.906	Panthera_tigris_altaica
ENSEASG00005014396	PABPC5	99	97.638	ENSPTRG00000022078	PABPC5	99	97.638	Pan_troglodytes
ENSEASG00005014396	PABPC5	99	97.375	ENSPANG00000018282	PABPC5	99	97.375	Papio_anubis
ENSEASG00005014396	PABPC5	100	94.503	ENSPEMG00000000171	Pabpc5	100	94.503	Peromyscus_maniculatus_bairdii
ENSEASG00005014396	PABPC5	99	97.638	ENSPPYG00000020526	PABPC5	99	97.638	Pongo_abelii
ENSEASG00005014396	PABPC5	99	97.455	ENSPCAG00000015577	PABPC5	100	97.455	Procavia_capensis
ENSEASG00005014396	PABPC5	100	97.120	ENSPCOG00000000676	PABPC5	100	97.120	Propithecus_coquereli
ENSEASG00005014396	PABPC5	100	98.691	ENSPVAG00000006465	PABPC5	100	98.691	Pteropus_vampyrus
ENSEASG00005014396	PABPC5	100	94.241	ENSRNOG00000003354	Pabpc5	100	94.241	Rattus_norvegicus
ENSEASG00005014396	PABPC5	99	97.375	ENSRBIG00000011760	PABPC5	99	97.375	Rhinopithecus_bieti
ENSEASG00005014396	PABPC5	99	97.375	ENSRROG00000036708	PABPC5	99	97.375	Rhinopithecus_roxellana
ENSEASG00005014396	PABPC5	99	97.638	ENSSBOG00000008658	PABPC5	99	97.638	Saimiri_boliviensis_boliviensis
ENSEASG00005014396	PABPC5	100	94.764	ENSSARG00000014012	PABPC5	100	94.764	Sorex_araneus
ENSEASG00005014396	PABPC5	100	97.644	ENSSSCG00000040194	PABPC5	100	97.644	Sus_scrofa
ENSEASG00005014396	PABPC5	100	97.906	ENSTBEG00000016482	PABPC5	100	97.906	Tupaia_belangeri
ENSEASG00005014396	PABPC5	100	97.644	ENSUAMG00000013627	PABPC5	100	97.644	Ursus_americanus
ENSEASG00005014396	PABPC5	100	97.382	ENSUMAG00000023934	PABPC5	100	97.382	Ursus_maritimus
ENSEASG00005014396	PABPC5	100	97.906	ENSVPAG00000001063	PABPC5	100	97.906	Vicugna_pacos
ENSEASG00005014396	PABPC5	100	97.906	ENSVVUG00000013172	PABPC5	100	97.906	Vulpes_vulpes