EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005014726 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 21774 bases
Position: chrPSZQ01000594.1:19960292-19982065
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005021509	CSD	PF00313.22	6e-14	1	1
ENSEASP00005021512	CSD	PF00313.22	9.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005023350	YBX3-202	849	-	ENSEASP00005021512	282 (aa)	-	-
ENSEAST00005023347	YBX3-201	1062	-	ENSEASP00005021509	353 (aa)	-	-

Gene Model

Click here to download ENSEASG00005014726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005014726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005014726	YBX3	60	39.267	ENSEASG00005007667	-	84	45.487
ENSEASG00005014726	YBX3	83	43.854	ENSEASG00005007816	-	94	46.831
ENSEASG00005014726	YBX3	60	48.691	ENSEASG00005001276	-	84	51.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005014726	YBX3	97	88.764	ENSG00000060138	YBX3	100	86.022	Homo_sapiens
ENSEASG00005014726	YBX3	90	96.226	ENSAMEG00000009393	YBX3	95	89.318	Ailuropoda_melanoleuca
ENSEASG00005014726	YBX3	67	87.654	ENSAPLG00000003147	YBX3	100	65.614	Anas_platyrhynchos
ENSEASG00005014726	YBX3	100	83.827	ENSANAG00000024492	-	100	84.906	Aotus_nancymaae
ENSEASG00005014726	YBX3	100	66.438	ENSANAG00000033366	-	93	80.769	Aotus_nancymaae
ENSEASG00005014726	YBX3	97	94.340	ENSBTAG00000009663	YBX3	84	86.984	Bos_taurus
ENSEASG00005014726	YBX3	96	66.071	ENSCJAG00000033824	-	96	88.406	Callithrix_jacchus
ENSEASG00005014726	YBX3	100	85.175	ENSCJAG00000021660	-	100	85.445	Callithrix_jacchus
ENSEASG00005014726	YBX3	77	90.210	ENSCAFG00000013401	YBX3	100	88.018	Canis_familiaris
ENSEASG00005014726	YBX3	100	92.582	ENSCAFG00020006412	YBX3	100	91.758	Canis_lupus_dingo
ENSEASG00005014726	YBX3	97	92.453	ENSCHIG00000010863	YBX3	89	85.266	Capra_hircus
ENSEASG00005014726	YBX3	76	87.108	ENSTSYG00000004204	-	88	88.502	Carlito_syrichta
ENSEASG00005014726	YBX3	100	73.196	ENSTSYG00000035821	-	100	72.165	Carlito_syrichta
ENSEASG00005014726	YBX3	76	83.916	ENSCAPG00000015039	YBX3	93	83.916	Cavia_aperea
ENSEASG00005014726	YBX3	78	84.932	ENSCPOG00000011329	YBX3	86	84.932	Cavia_porcellus
ENSEASG00005014726	YBX3	100	85.215	ENSCCAG00000016469	YBX3	100	85.484	Cebus_capucinus
ENSEASG00005014726	YBX3	100	84.718	ENSCATG00000034411	YBX3	100	85.255	Cercocebus_atys
ENSEASG00005014726	YBX3	76	84.965	ENSCLAG00000016030	YBX3	94	84.965	Chinchilla_lanigera
ENSEASG00005014726	YBX3	97	88.268	ENSCSAG00000008744	YBX3	100	85.523	Chlorocebus_sabaeus
ENSEASG00005014726	YBX3	97	76.271	ENSCHOG00000011988	YBX3	58	92.593	Choloepus_hoffmanni
ENSEASG00005014726	YBX3	69	89.583	ENSCPBG00000014147	YBX3	81	74.570	Chrysemys_picta_bellii
ENSEASG00005014726	YBX3	79	84.746	ENSCANG00000036801	YBX3	94	84.746	Colobus_angolensis_palliatus
ENSEASG00005014726	YBX3	100	84.553	ENSCGRG00001016148	Ybx3	100	81.301	Cricetulus_griseus_chok1gshd
ENSEASG00005014726	YBX3	76	86.598	ENSCGRG00000004563	Ybx3	98	86.598	Cricetulus_griseus_crigri
ENSEASG00005014726	YBX3	84	90.566	ENSDORG00000009103	Ybx3	81	87.762	Dipodomys_ordii
ENSEASG00005014726	YBX3	67	88.889	ENSETEG00000002557	YBX3	99	76.056	Echinops_telfairi
ENSEASG00005014726	YBX3	100	96.944	ENSECAG00000013777	YBX3	100	96.944	Equus_caballus
ENSEASG00005014726	YBX3	76	85.563	ENSEEUG00000010415	YBX3	100	85.915	Erinaceus_europaeus
ENSEASG00005014726	YBX3	100	89.247	ENSFCAG00000027748	YBX3	100	89.785	Felis_catus
ENSEASG00005014726	YBX3	67	87.912	ENSFALG00000003661	YBX3	100	64.286	Ficedula_albicollis
ENSEASG00005014726	YBX3	76	80.769	ENSFDAG00000021192	YBX3	92	81.469	Fukomys_damarensis
ENSEASG00005014726	YBX3	71	73.303	ENSGALG00000031890	YBX3	76	76.018	Gallus_gallus
ENSEASG00005014726	YBX3	71	89.583	ENSGAGG00000017780	YBX3	77	78.281	Gopherus_agassizii
ENSEASG00005014726	YBX3	100	85.523	ENSGGOG00000001352	YBX3	100	85.791	Gorilla_gorilla
ENSEASG00005014726	YBX3	73	73.723	ENSHGLG00000015495	-	86	75.000	Heterocephalus_glaber_female
ENSEASG00005014726	YBX3	81	72.222	ENSHGLG00000014798	-	86	73.649	Heterocephalus_glaber_female
ENSEASG00005014726	YBX3	71	84.404	ENSHGLG00100003589	YBX3	87	85.780	Heterocephalus_glaber_male
ENSEASG00005014726	YBX3	93	82.059	ENSSTOG00000032577	-	94	81.953	Ictidomys_tridecemlineatus
ENSEASG00005014726	YBX3	76	81.469	ENSSTOG00000002108	-	88	81.469	Ictidomys_tridecemlineatus
ENSEASG00005014726	YBX3	79	66.090	ENSJJAG00000014239	Ybx3	96	73.864	Jaculus_jaculus
ENSEASG00005014726	YBX3	100	89.702	ENSLAFG00000017247	YBX3	100	89.702	Loxodonta_africana
ENSEASG00005014726	YBX3	97	91.379	ENSMFAG00000039369	YBX3	100	87.228	Macaca_fascicularis
ENSEASG00005014726	YBX3	87	84.308	ENSMMUG00000022469	YBX3	99	83.489	Macaca_mulatta
ENSEASG00005014726	YBX3	97	90.805	ENSMNEG00000045109	YBX3	100	86.957	Macaca_nemestrina
ENSEASG00005014726	YBX3	87	90.566	ENSMLEG00000033618	YBX3	81	87.063	Mandrillus_leucophaeus
ENSEASG00005014726	YBX3	69	85.542	ENSMGAG00000014224	YBX3	100	75.814	Meleagris_gallopavo
ENSEASG00005014726	YBX3	88	85.538	ENSMAUG00000012185	Ybx3	98	83.125	Mesocricetus_auratus
ENSEASG00005014726	YBX3	100	89.730	ENSMICG00000038002	-	100	90.000	Microcebus_murinus
ENSEASG00005014726	YBX3	100	73.196	ENSMICG00000031459	-	86	81.429	Microcebus_murinus
ENSEASG00005014726	YBX3	81	88.079	ENSMOCG00000016291	Ybx3	96	87.755	Microtus_ochrogaster
ENSEASG00005014726	YBX3	76	80.139	ENSMODG00000018248	YBX3	91	80.139	Monodelphis_domestica
ENSEASG00005014726	YBX3	100	84.011	MGP_CAROLIEiJ_G0028947	Ybx3	100	81.572	Mus_caroli
ENSEASG00005014726	YBX3	100	84.011	ENSMUSG00000030189	Ybx3	100	81.572	Mus_musculus
ENSEASG00005014726	YBX3	100	84.553	MGP_PahariEiJ_G0022709	Ybx3	100	82.114	Mus_pahari
ENSEASG00005014726	YBX3	100	84.282	MGP_SPRETEiJ_G0029994	Ybx3	100	81.843	Mus_spretus
ENSEASG00005014726	YBX3	100	76.316	ENSMPUG00000011810	YBX3	100	77.105	Mustela_putorius_furo
ENSEASG00005014726	YBX3	69	90.980	ENSMLUG00000007476	YBX3	95	88.627	Myotis_lucifugus
ENSEASG00005014726	YBX3	85	79.811	ENSNGAG00000000710	Ybx3	100	77.016	Nannospalax_galili
ENSEASG00005014726	YBX3	83	90.654	ENSNLEG00000034844	YBX3	91	81.931	Nomascus_leucogenys
ENSEASG00005014726	YBX3	53	64.904	ENSMEUG00000002507	-	81	74.854	Notamacropus_eugenii
ENSEASG00005014726	YBX3	86	80.878	ENSODEG00000017957	YBX3	94	80.878	Octodon_degus
ENSEASG00005014726	YBX3	71	94.340	ENSOCUG00000001889	YBX3	85	83.673	Oryctolagus_cuniculus
ENSEASG00005014726	YBX3	100	86.472	ENSOGAG00000013245	YBX3	100	86.472	Otolemur_garnettii
ENSEASG00005014726	YBX3	71	93.396	ENSOARG00000020919	YBX3	99	82.594	Ovis_aries
ENSEASG00005014726	YBX3	97	84.112	ENSPPAG00000039068	YBX3	82	87.458	Pan_paniscus
ENSEASG00005014726	YBX3	100	89.516	ENSPPRG00000005859	YBX3	100	90.054	Panthera_pardus
ENSEASG00005014726	YBX3	76	90.813	ENSPTIG00000005322	YBX3	81	90.526	Panthera_tigris_altaica
ENSEASG00005014726	YBX3	100	85.294	ENSPTRG00000004681	YBX3	100	85.561	Pan_troglodytes
ENSEASG00005014726	YBX3	97	88.202	ENSPANG00000010280	YBX3	100	85.484	Papio_anubis
ENSEASG00005014726	YBX3	70	75.576	ENSPSIG00000009247	YBX3	100	79.439	Pelodiscus_sinensis
ENSEASG00005014726	YBX3	81	83.333	ENSPEMG00000010391	-	85	85.778	Peromyscus_maniculatus_bairdii
ENSEASG00005014726	YBX3	86	86.604	ENSPEMG00000012132	-	99	84.062	Peromyscus_maniculatus_bairdii
ENSEASG00005014726	YBX3	62	89.231	ENSPCIG00000029949	YBX3	97	80.800	Phascolarctos_cinereus
ENSEASG00005014726	YBX3	97	89.266	ENSPPYG00000004279	YBX3	100	85.984	Pongo_abelii
ENSEASG00005014726	YBX3	78	100.000	ENSPCAG00000001397	YBX3	98	86.268	Procavia_capensis
ENSEASG00005014726	YBX3	95	87.429	ENSPVAG00000006740	YBX3	77	88.194	Pteropus_vampyrus
ENSEASG00005014726	YBX3	100	84.824	ENSRNOG00000005480	Ybx3	100	82.385	Rattus_norvegicus
ENSEASG00005014726	YBX3	100	84.367	ENSRBIG00000039208	YBX3	100	85.175	Rhinopithecus_bieti
ENSEASG00005014726	YBX3	97	88.701	ENSRROG00000029638	YBX3	100	86.242	Rhinopithecus_roxellana
ENSEASG00005014726	YBX3	96	75.910	ENSSBOG00000030573	YBX3	86	85.223	Saimiri_boliviensis_boliviensis
ENSEASG00005014726	YBX3	67	87.912	ENSSHAG00000003262	YBX3	98	77.586	Sarcophilus_harrisii
ENSEASG00005014726	YBX3	100	78.526	ENSSSCG00000000633	YBX3	100	87.895	Sus_scrofa
ENSEASG00005014726	YBX3	67	87.654	ENSTGUG00000012047	YBX3	100	64.211	Taeniopygia_guttata
ENSEASG00005014726	YBX3	100	78.108	ENSTBEG00000012570	YBX3	88	81.562	Tupaia_belangeri
ENSEASG00005014726	YBX3	71	81.923	ENSTTRG00000008045	YBX3	96	85.771	Tursiops_truncatus
ENSEASG00005014726	YBX3	74	91.575	ENSUAMG00000016662	YBX3	100	91.575	Ursus_americanus
ENSEASG00005014726	YBX3	76	90.813	ENSUMAG00000016118	YBX3	94	90.526	Ursus_maritimus
ENSEASG00005014726	YBX3	62	83.871	ENSVPAG00000000876	YBX3	100	65.724	Vicugna_pacos
ENSEASG00005014726	YBX3	74	93.657	ENSVVUG00000004956	YBX3	100	93.657	Vulpes_vulpes
ENSEASG00005014726	YBX3	71	64.545	ENSXETG00000016239	ybx3	90	64.444	Xenopus_tropicalis