EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005014739 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 30713 bases
Position: chrPSZQ01007093.1:6617662-6648374
Accession: 16060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005021535	TruB_N	PF01509.18	6.8e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005023373	TRUB1-201	1053	-	ENSEASP00005021535	350 (aa)	-	UPI000155D77A

Gene Model

Click here to download ENSEASG00005014739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005014739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005014739	TRUB1	63	33.632	ENSEASG00005016819	TRUB2	66	33.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005014739	TRUB1	99	92.550	ENSG00000165832	TRUB1	96	92.857	Homo_sapiens
ENSEASG00005014739	TRUB1	70	68.571	ENSAPOG00000020565	trub1	89	68.293	Acanthochromis_polyacanthus
ENSEASG00005014739	TRUB1	96	94.379	ENSAMEG00000014931	TRUB1	96	94.379	Ailuropoda_melanoleuca
ENSEASG00005014739	TRUB1	81	56.690	ENSACIG00000003060	trub1	94	56.690	Amphilophus_citrinellus
ENSEASG00005014739	TRUB1	70	68.571	ENSAOCG00000017188	trub1	89	68.293	Amphiprion_ocellaris
ENSEASG00005014739	TRUB1	70	67.886	ENSAPEG00000015209	trub1	89	67.886	Amphiprion_percula
ENSEASG00005014739	TRUB1	69	68.465	ENSATEG00000023291	trub1	86	68.465	Anabas_testudineus
ENSEASG00005014739	TRUB1	79	76.000	ENSAPLG00000006808	TRUB1	99	76.000	Anas_platyrhynchos
ENSEASG00005014739	TRUB1	77	70.632	ENSACAG00000009282	TRUB1	97	70.632	Anolis_carolinensis
ENSEASG00005014739	TRUB1	95	94.311	ENSANAG00000022870	TRUB1	95	94.328	Aotus_nancymaae
ENSEASG00005014739	TRUB1	72	66.667	ENSACLG00000000823	trub1	91	66.667	Astatotilapia_calliptera
ENSEASG00005014739	TRUB1	79	64.000	ENSAMXG00000015845	trub1	92	64.000	Astyanax_mexicanus
ENSEASG00005014739	TRUB1	98	94.169	ENSBTAG00000012955	TRUB1	96	94.659	Bos_taurus
ENSEASG00005014739	TRUB1	99	93.429	ENSCJAG00000047815	TRUB1	96	94.048	Callithrix_jacchus
ENSEASG00005014739	TRUB1	100	94.286	ENSCAFG00000011688	TRUB1	96	94.659	Canis_familiaris
ENSEASG00005014739	TRUB1	100	94.571	ENSCAFG00020013237	TRUB1	96	94.955	Canis_lupus_dingo
ENSEASG00005014739	TRUB1	98	93.294	ENSCHIG00000020884	TRUB1	96	93.769	Capra_hircus
ENSEASG00005014739	TRUB1	99	92.000	ENSTSYG00000000446	TRUB1	85	95.318	Carlito_syrichta
ENSEASG00005014739	TRUB1	72	84.190	ENSCAPG00000017088	TRUB1	99	84.190	Cavia_aperea
ENSEASG00005014739	TRUB1	71	80.645	ENSCPOG00000030129	-	76	92.821	Cavia_porcellus
ENSEASG00005014739	TRUB1	70	86.122	ENSCPOG00000040236	-	95	87.069	Cavia_porcellus
ENSEASG00005014739	TRUB1	96	93.750	ENSCCAG00000028842	TRUB1	96	93.750	Cebus_capucinus
ENSEASG00005014739	TRUB1	99	93.123	ENSCATG00000033431	TRUB1	96	93.452	Cercocebus_atys
ENSEASG00005014739	TRUB1	70	89.388	ENSCLAG00000008664	TRUB1	95	90.517	Chinchilla_lanigera
ENSEASG00005014739	TRUB1	99	93.410	ENSCSAG00000004891	TRUB1	96	93.750	Chlorocebus_sabaeus
ENSEASG00005014739	TRUB1	100	79.429	ENSCHOG00000011931	TRUB1	96	79.822	Choloepus_hoffmanni
ENSEASG00005014739	TRUB1	78	79.412	ENSCPBG00000003051	TRUB1	94	79.412	Chrysemys_picta_bellii
ENSEASG00005014739	TRUB1	99	93.410	ENSCANG00000029445	TRUB1	96	93.750	Colobus_angolensis_palliatus
ENSEASG00005014739	TRUB1	73	86.667	ENSCGRG00001016772	-	90	78.523	Cricetulus_griseus_chok1gshd
ENSEASG00005014739	TRUB1	80	79.004	ENSCGRG00001010322	-	80	78.983	Cricetulus_griseus_chok1gshd
ENSEASG00005014739	TRUB1	80	87.900	ENSCGRG00000010806	Trub1	91	87.248	Cricetulus_griseus_crigri
ENSEASG00005014739	TRUB1	73	62.109	ENSCSEG00000011261	trub1	97	56.478	Cynoglossus_semilaevis
ENSEASG00005014739	TRUB1	70	67.755	ENSCVAG00000008791	trub1	75	67.755	Cyprinodon_variegatus
ENSEASG00005014739	TRUB1	75	65.909	ENSDARG00000053805	trub1	91	65.909	Danio_rerio
ENSEASG00005014739	TRUB1	97	87.977	ENSDNOG00000001069	TRUB1	96	88.393	Dasypus_novemcinctus
ENSEASG00005014739	TRUB1	100	88.286	ENSDORG00000010431	Trub1	87	93.333	Dipodomys_ordii
ENSEASG00005014739	TRUB1	81	78.431	ENSETEG00000009183	TRUB1	65	85.235	Echinops_telfairi
ENSEASG00005014739	TRUB1	100	100.000	ENSECAG00000007177	TRUB1	100	100.000	Equus_caballus
ENSEASG00005014739	TRUB1	99	75.698	ENSEEUG00000013993	TRUB1	83	81.605	Erinaceus_europaeus
ENSEASG00005014739	TRUB1	70	68.980	ENSELUG00000000502	trub1	86	68.980	Esox_lucius
ENSEASG00005014739	TRUB1	96	94.627	ENSFCAG00000031927	TRUB1	96	94.627	Felis_catus
ENSEASG00005014739	TRUB1	69	76.250	ENSFALG00000002232	TRUB1	92	76.250	Ficedula_albicollis
ENSEASG00005014739	TRUB1	70	87.755	ENSFDAG00000008140	TRUB1	95	90.086	Fukomys_damarensis
ENSEASG00005014739	TRUB1	70	66.939	ENSFHEG00000004016	trub1	84	66.939	Fundulus_heteroclitus
ENSEASG00005014739	TRUB1	78	75.368	ENSGALG00000009091	TRUB1	97	74.528	Gallus_gallus
ENSEASG00005014739	TRUB1	68	64.583	ENSGAFG00000009193	trub1	86	63.934	Gambusia_affinis
ENSEASG00005014739	TRUB1	56	68.205	ENSGACG00000015387	trub1	96	68.205	Gasterosteus_aculeatus
ENSEASG00005014739	TRUB1	90	72.240	ENSGAGG00000009758	TRUB1	81	78.092	Gopherus_agassizii
ENSEASG00005014739	TRUB1	99	93.123	ENSGGOG00000004583	TRUB1	96	93.452	Gorilla_gorilla
ENSEASG00005014739	TRUB1	72	66.667	ENSHBUG00000016787	trub1	91	66.667	Haplochromis_burtoni
ENSEASG00005014739	TRUB1	100	88.286	ENSHGLG00000015314	TRUB1	97	89.318	Heterocephalus_glaber_female
ENSEASG00005014739	TRUB1	70	86.939	ENSHGLG00100009183	TRUB1	95	88.362	Heterocephalus_glaber_male
ENSEASG00005014739	TRUB1	70	66.939	ENSHCOG00000017877	trub1	89	66.939	Hippocampus_comes
ENSEASG00005014739	TRUB1	79	64.855	ENSIPUG00000017559	trub1	97	64.855	Ictalurus_punctatus
ENSEASG00005014739	TRUB1	90	92.089	ENSSTOG00000003641	TRUB1	90	93.333	Ictidomys_tridecemlineatus
ENSEASG00005014739	TRUB1	100	83.714	ENSJJAG00000011800	Trub1	88	90.667	Jaculus_jaculus
ENSEASG00005014739	TRUB1	72	65.759	ENSKMAG00000006232	trub1	92	65.759	Kryptolebias_marmoratus
ENSEASG00005014739	TRUB1	76	63.910	ENSLBEG00000026722	trub1	92	63.910	Labrus_bergylta
ENSEASG00005014739	TRUB1	79	73.285	ENSLACG00000014885	TRUB1	92	73.285	Latimeria_chalumnae
ENSEASG00005014739	TRUB1	78	70.330	ENSLOCG00000012979	trub1	93	70.330	Lepisosteus_oculatus
ENSEASG00005014739	TRUB1	99	80.112	ENSLAFG00000015452	TRUB1	86	85.000	Loxodonta_africana
ENSEASG00005014739	TRUB1	99	93.123	ENSMFAG00000031767	TRUB1	96	93.452	Macaca_fascicularis
ENSEASG00005014739	TRUB1	99	93.410	ENSMMUG00000001902	TRUB1	96	93.750	Macaca_mulatta
ENSEASG00005014739	TRUB1	99	89.398	ENSMNEG00000044646	TRUB1	96	89.583	Macaca_nemestrina
ENSEASG00005014739	TRUB1	99	93.123	ENSMLEG00000042655	TRUB1	96	93.452	Mandrillus_leucophaeus
ENSEASG00005014739	TRUB1	72	66.667	ENSMZEG00005024095	trub1	91	66.667	Maylandia_zebra
ENSEASG00005014739	TRUB1	78	73.897	ENSMGAG00000011135	TRUB1	93	73.897	Meleagris_gallopavo
ENSEASG00005014739	TRUB1	85	84.950	ENSMAUG00000011101	Trub1	89	85.000	Mesocricetus_auratus
ENSEASG00005014739	TRUB1	100	94.000	ENSMICG00000016324	TRUB1	97	94.362	Microcebus_murinus
ENSEASG00005014739	TRUB1	93	82.822	ENSMOCG00000017759	Trub1	90	86.622	Microtus_ochrogaster
ENSEASG00005014739	TRUB1	82	82.168	ENSMODG00000009676	TRUB1	81	80.405	Monodelphis_domestica
ENSEASG00005014739	TRUB1	100	81.143	MGP_CAROLIEiJ_G0023100	Trub1	88	85.953	Mus_caroli
ENSEASG00005014739	TRUB1	100	80.000	ENSMUSG00000025086	Trub1	88	84.950	Mus_musculus
ENSEASG00005014739	TRUB1	100	81.143	MGP_PahariEiJ_G0014588	Trub1	88	85.953	Mus_pahari
ENSEASG00005014739	TRUB1	100	80.286	MGP_SPRETEiJ_G0024021	Trub1	88	85.284	Mus_spretus
ENSEASG00005014739	TRUB1	96	95.536	ENSMPUG00000003556	TRUB1	96	95.536	Mustela_putorius_furo
ENSEASG00005014739	TRUB1	95	89.222	ENSMLUG00000017686	TRUB1	96	87.798	Myotis_lucifugus
ENSEASG00005014739	TRUB1	100	87.714	ENSNGAG00000018682	Trub1	97	89.318	Nannospalax_galili
ENSEASG00005014739	TRUB1	70	67.886	ENSNBRG00000023393	trub1	88	67.886	Neolamprologus_brichardi
ENSEASG00005014739	TRUB1	96	93.155	ENSNLEG00000016345	TRUB1	96	93.155	Nomascus_leucogenys
ENSEASG00005014739	TRUB1	57	89.055	ENSMEUG00000006603	TRUB1	78	86.256	Notamacropus_eugenii
ENSEASG00005014739	TRUB1	86	85.430	ENSOPRG00000009371	TRUB1	87	85.333	Ochotona_princeps
ENSEASG00005014739	TRUB1	99	85.100	ENSODEG00000010854	TRUB1	96	86.012	Octodon_degus
ENSEASG00005014739	TRUB1	70	66.667	ENSONIG00000007249	trub1	89	66.667	Oreochromis_niloticus
ENSEASG00005014739	TRUB1	78	80.657	ENSOANG00000001556	TRUB1	93	78.445	Ornithorhynchus_anatinus
ENSEASG00005014739	TRUB1	100	85.714	ENSOCUG00000009456	TRUB1	97	88.623	Oryctolagus_cuniculus
ENSEASG00005014739	TRUB1	69	68.880	ENSORLG00000029719	trub1	86	68.880	Oryzias_latipes
ENSEASG00005014739	TRUB1	69	68.465	ENSORLG00020016767	trub1	85	68.465	Oryzias_latipes_hni
ENSEASG00005014739	TRUB1	69	68.465	ENSORLG00015014728	trub1	86	68.465	Oryzias_latipes_hsok
ENSEASG00005014739	TRUB1	79	63.475	ENSOMEG00000014556	trub1	91	64.528	Oryzias_melastigma
ENSEASG00005014739	TRUB1	100	93.714	ENSOGAG00000015895	TRUB1	96	95.252	Otolemur_garnettii
ENSEASG00005014739	TRUB1	100	89.076	ENSOARG00000015591	TRUB1	96	90.116	Ovis_aries
ENSEASG00005014739	TRUB1	99	93.123	ENSPPAG00000043645	TRUB1	96	93.452	Pan_paniscus
ENSEASG00005014739	TRUB1	96	94.328	ENSPPRG00000007096	TRUB1	96	94.328	Panthera_pardus
ENSEASG00005014739	TRUB1	96	94.627	ENSPTIG00000006378	TRUB1	96	94.627	Panthera_tigris_altaica
ENSEASG00005014739	TRUB1	99	93.123	ENSPTRG00000002964	TRUB1	96	93.452	Pan_troglodytes
ENSEASG00005014739	TRUB1	99	93.123	ENSPANG00000020712	TRUB1	96	93.452	Papio_anubis
ENSEASG00005014739	TRUB1	78	76.838	ENSPSIG00000012877	TRUB1	93	76.838	Pelodiscus_sinensis
ENSEASG00005014739	TRUB1	70	64.490	ENSPMGG00000000075	trub1	88	64.490	Periophthalmus_magnuspinnatus
ENSEASG00005014739	TRUB1	100	78.286	ENSPEMG00000011156	Trub1	88	84.615	Peromyscus_maniculatus_bairdii
ENSEASG00005014739	TRUB1	82	81.469	ENSPCIG00000009729	TRUB1	90	72.072	Phascolarctos_cinereus
ENSEASG00005014739	TRUB1	70	65.714	ENSPFOG00000009950	trub1	90	65.714	Poecilia_formosa
ENSEASG00005014739	TRUB1	70	65.306	ENSPLAG00000013855	trub1	86	65.306	Poecilia_latipinna
ENSEASG00005014739	TRUB1	70	65.714	ENSPMEG00000009064	trub1	88	65.714	Poecilia_mexicana
ENSEASG00005014739	TRUB1	70	66.531	ENSPREG00000003343	trub1	88	66.531	Poecilia_reticulata
ENSEASG00005014739	TRUB1	96	92.857	ENSPPYG00000002676	TRUB1	96	92.857	Pongo_abelii
ENSEASG00005014739	TRUB1	99	76.136	ENSPCAG00000008427	TRUB1	96	74.556	Procavia_capensis
ENSEASG00005014739	TRUB1	100	88.857	ENSPCOG00000024360	TRUB1	96	88.988	Propithecus_coquereli
ENSEASG00005014739	TRUB1	75	93.939	ENSPVAG00000007575	TRUB1	95	94.422	Pteropus_vampyrus
ENSEASG00005014739	TRUB1	72	66.667	ENSPNYG00000018614	trub1	91	66.667	Pundamilia_nyererei
ENSEASG00005014739	TRUB1	78	57.721	ENSPNAG00000006881	trub1	88	57.721	Pygocentrus_nattereri
ENSEASG00005014739	TRUB1	100	81.714	ENSRNOG00000017321	Trub1	88	86.000	Rattus_norvegicus
ENSEASG00005014739	TRUB1	99	83.095	ENSRBIG00000033423	TRUB1	96	83.333	Rhinopithecus_bieti
ENSEASG00005014739	TRUB1	99	92.837	ENSRROG00000033902	TRUB1	96	93.452	Rhinopithecus_roxellana
ENSEASG00005014739	TRUB1	96	94.048	ENSSBOG00000024237	TRUB1	96	94.048	Saimiri_boliviensis_boliviensis
ENSEASG00005014739	TRUB1	73	80.078	ENSSHAG00000009346	TRUB1	86	80.078	Sarcophilus_harrisii
ENSEASG00005014739	TRUB1	69	70.370	ENSSFOG00015022124	trub1	83	70.370	Scleropages_formosus
ENSEASG00005014739	TRUB1	70	68.293	ENSSMAG00000001020	trub1	88	68.293	Scophthalmus_maximus
ENSEASG00005014739	TRUB1	69	68.750	ENSSDUG00000016414	trub1	88	68.699	Seriola_dumerili
ENSEASG00005014739	TRUB1	69	69.167	ENSSLDG00000015486	trub1	88	69.106	Seriola_lalandi_dorsalis
ENSEASG00005014739	TRUB1	80	77.143	ENSSPUG00000001642	TRUB1	96	77.143	Sphenodon_punctatus
ENSEASG00005014739	TRUB1	75	66.540	ENSSPAG00000001217	trub1	94	66.540	Stegastes_partitus
ENSEASG00005014739	TRUB1	100	88.857	ENSSSCG00000010653	TRUB1	96	89.318	Sus_scrofa
ENSEASG00005014739	TRUB1	77	75.926	ENSTGUG00000010971	TRUB1	97	75.735	Taeniopygia_guttata
ENSEASG00005014739	TRUB1	72	76.680	ENSTBEG00000002880	TRUB1	99	76.680	Tupaia_belangeri
ENSEASG00005014739	TRUB1	72	91.633	ENSTTRG00000005767	TRUB1	95	92.032	Tursiops_truncatus
ENSEASG00005014739	TRUB1	96	95.833	ENSUAMG00000024876	TRUB1	96	95.833	Ursus_americanus
ENSEASG00005014739	TRUB1	84	96.610	ENSUMAG00000002411	TRUB1	88	96.622	Ursus_maritimus
ENSEASG00005014739	TRUB1	100	94.000	ENSVPAG00000005507	TRUB1	96	94.065	Vicugna_pacos
ENSEASG00005014739	TRUB1	100	92.857	ENSVVUG00000010085	TRUB1	80	93.175	Vulpes_vulpes
ENSEASG00005014739	TRUB1	78	67.279	ENSXETG00000023828	trub1	98	67.279	Xenopus_tropicalis
ENSEASG00005014739	TRUB1	68	65.272	ENSXCOG00000017847	trub1	86	64.609	Xiphophorus_couchianus
ENSEASG00005014739	TRUB1	70	65.306	ENSXMAG00000014701	trub1	88	65.306	Xiphophorus_maculatus