EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005014800 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 9034 bases
Position: chrPSZQ01000897.1:81148865-81157898
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005021643	MBD	PF01429.19	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005023486	MBD4-201	1716	-	ENSEASP00005021643	571 (aa)	-	-

Gene Model

Click here to download ENSEASG00005014800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005014800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005014800	MBD4	100	79.826	ENSG00000129071	MBD4	99	79.826	Homo_sapiens
ENSEASG00005014800	MBD4	86	42.285	ENSAPOG00000021668	mbd4	95	42.515	Acanthochromis_polyacanthus
ENSEASG00005014800	MBD4	100	80.245	ENSAMEG00000004562	MBD4	99	80.245	Ailuropoda_melanoleuca
ENSEASG00005014800	MBD4	86	42.857	ENSAOCG00000001157	mbd4	95	42.857	Amphiprion_ocellaris
ENSEASG00005014800	MBD4	100	73.601	ENSBTAG00000021645	MBD4	100	73.601	Bos_taurus
ENSEASG00005014800	MBD4	100	76.963	ENSCJAG00000017293	MBD4	99	76.963	Callithrix_jacchus
ENSEASG00005014800	MBD4	100	80.314	ENSCAFG00000004867	MBD4	99	80.314	Canis_familiaris
ENSEASG00005014800	MBD4	100	80.314	ENSCAFG00020007082	MBD4	99	80.314	Canis_lupus_dingo
ENSEASG00005014800	MBD4	100	73.252	ENSCHIG00000009760	MBD4	100	73.252	Capra_hircus
ENSEASG00005014800	MBD4	100	78.397	ENSCCAG00000029796	MBD4	99	78.397	Cebus_capucinus
ENSEASG00005014800	MBD4	100	78.360	ENSCATG00000035211	MBD4	99	78.360	Cercocebus_atys
ENSEASG00005014800	MBD4	100	71.204	ENSCLAG00000008974	MBD4	100	71.204	Chinchilla_lanigera
ENSEASG00005014800	MBD4	100	78.185	ENSCSAG00000009037	MBD4	99	78.185	Chlorocebus_sabaeus
ENSEASG00005014800	MBD4	87	50.579	ENSCPBG00000014704	MBD4	89	50.579	Chrysemys_picta_bellii
ENSEASG00005014800	MBD4	100	78.010	ENSCANG00000007120	MBD4	99	78.010	Colobus_angolensis_palliatus
ENSEASG00005014800	MBD4	100	68.301	ENSCGRG00001003507	Mbd4	100	68.301	Cricetulus_griseus_chok1gshd
ENSEASG00005014800	MBD4	100	68.301	ENSCGRG00000010974	Mbd4	100	68.301	Cricetulus_griseus_crigri
ENSEASG00005014800	MBD4	100	76.789	ENSDNOG00000049619	MBD4	100	76.789	Dasypus_novemcinctus
ENSEASG00005014800	MBD4	81	65.591	ENSDORG00000000902	-	98	64.435	Dipodomys_ordii
ENSEASG00005014800	MBD4	100	99.124	ENSECAG00000022106	MBD4	100	99.124	Equus_caballus
ENSEASG00005014800	MBD4	92	66.160	ENSEEUG00000011459	MBD4	97	66.160	Erinaceus_europaeus
ENSEASG00005014800	MBD4	100	80.977	ENSFCAG00000000083	MBD4	99	80.977	Felis_catus
ENSEASG00005014800	MBD4	82	43.711	ENSFALG00000013663	MBD4	99	43.168	Ficedula_albicollis
ENSEASG00005014800	MBD4	87	50.867	ENSGAGG00000018644	MBD4	89	50.867	Gopherus_agassizii
ENSEASG00005014800	MBD4	100	78.609	ENSGGOG00000010698	MBD4	99	78.609	Gorilla_gorilla
ENSEASG00005014800	MBD4	100	73.345	ENSHGLG00000009034	MBD4	100	73.345	Heterocephalus_glaber_female
ENSEASG00005014800	MBD4	100	73.519	ENSHGLG00100000135	MBD4	100	73.519	Heterocephalus_glaber_male
ENSEASG00005014800	MBD4	100	74.346	ENSSTOG00000020663	MBD4	100	74.346	Ictidomys_tridecemlineatus
ENSEASG00005014800	MBD4	99	76.562	ENSLAFG00000010609	MBD4	99	76.562	Loxodonta_africana
ENSEASG00005014800	MBD4	99	77.972	ENSMFAG00000002266	MBD4	99	77.972	Macaca_fascicularis
ENSEASG00005014800	MBD4	99	78.049	ENSMMUG00000012723	MBD4	99	78.049	Macaca_mulatta
ENSEASG00005014800	MBD4	96	76.909	ENSMNEG00000029752	MBD4	99	76.825	Macaca_nemestrina
ENSEASG00005014800	MBD4	100	77.836	ENSMLEG00000024859	MBD4	99	77.836	Mandrillus_leucophaeus
ENSEASG00005014800	MBD4	100	80.105	ENSMICG00000008022	MBD4	99	80.105	Microcebus_murinus
ENSEASG00005014800	MBD4	68	51.918	ENSMOCG00000002466	-	96	51.918	Microtus_ochrogaster
ENSEASG00005014800	MBD4	87	59.681	ENSMODG00000006399	-	99	59.681	Monodelphis_domestica
ENSEASG00005014800	MBD4	87	44.489	ENSMALG00000021517	mbd4	87	44.489	Monopterus_albus
ENSEASG00005014800	MBD4	100	68.007	MGP_CAROLIEiJ_G0028760	Mbd4	100	68.007	Mus_caroli
ENSEASG00005014800	MBD4	100	66.608	ENSMUSG00000030322	Mbd4	100	66.608	Mus_musculus
ENSEASG00005014800	MBD4	100	67.539	MGP_PahariEiJ_G0022511	-	100	67.539	Mus_pahari
ENSEASG00005014800	MBD4	100	66.259	MGP_SPRETEiJ_G0029788	Mbd4	100	66.259	Mus_spretus
ENSEASG00005014800	MBD4	100	78.534	ENSMPUG00000017195	MBD4	99	78.534	Mustela_putorius_furo
ENSEASG00005014800	MBD4	95	83.150	ENSMLUG00000014766	MBD4	99	83.150	Myotis_lucifugus
ENSEASG00005014800	MBD4	100	80.454	ENSNLEG00000005337	MBD4	99	80.454	Nomascus_leucogenys
ENSEASG00005014800	MBD4	100	65.271	ENSOPRG00000000473	MBD4	99	65.271	Ochotona_princeps
ENSEASG00005014800	MBD4	86	43.168	ENSONIG00000017212	mbd4	100	43.168	Oreochromis_niloticus
ENSEASG00005014800	MBD4	68	46.310	ENSOANG00000004589	-	89	46.310	Ornithorhynchus_anatinus
ENSEASG00005014800	MBD4	100	68.458	ENSOCUG00000013006	MBD4	99	68.458	Oryctolagus_cuniculus
ENSEASG00005014800	MBD4	100	72.949	ENSOGAG00000010236	MBD4	100	72.949	Otolemur_garnettii
ENSEASG00005014800	MBD4	100	73.252	ENSOARG00000014699	MBD4	100	73.252	Ovis_aries
ENSEASG00005014800	MBD4	100	79.130	ENSPPAG00000036528	MBD4	99	79.130	Pan_paniscus
ENSEASG00005014800	MBD4	100	80.454	ENSPPRG00000016480	MBD4	99	80.454	Panthera_pardus
ENSEASG00005014800	MBD4	100	79.652	ENSPTRG00000015377	MBD4	99	79.652	Pan_troglodytes
ENSEASG00005014800	MBD4	100	78.883	ENSPANG00000015047	MBD4	99	78.883	Papio_anubis
ENSEASG00005014800	MBD4	87	49.905	ENSPSIG00000007892	MBD4	88	49.905	Pelodiscus_sinensis
ENSEASG00005014800	MBD4	94	60.444	ENSPEMG00000006226	Mbd4	99	60.221	Peromyscus_maniculatus_bairdii
ENSEASG00005014800	MBD4	90	57.722	ENSPCIG00000002276	-	98	57.722	Phascolarctos_cinereus
ENSEASG00005014800	MBD4	100	78.397	ENSPPYG00000013417	MBD4	99	78.397	Pongo_abelii
ENSEASG00005014800	MBD4	96	71.767	ENSPCAG00000012915	MBD4	99	71.767	Procavia_capensis
ENSEASG00005014800	MBD4	100	83.770	ENSPVAG00000005238	MBD4	99	83.770	Pteropus_vampyrus
ENSEASG00005014800	MBD4	100	68.815	ENSRNOG00000010919	Mbd4	100	68.815	Rattus_norvegicus
ENSEASG00005014800	MBD4	100	78.360	ENSRBIG00000027722	MBD4	99	78.360	Rhinopithecus_bieti
ENSEASG00005014800	MBD4	100	78.185	ENSRROG00000029136	MBD4	99	78.185	Rhinopithecus_roxellana
ENSEASG00005014800	MBD4	100	77.622	ENSSBOG00000016810	MBD4	99	77.622	Saimiri_boliviensis_boliviensis
ENSEASG00005014800	MBD4	99	53.968	ENSSHAG00000012953	MBD4	99	53.968	Sarcophilus_harrisii
ENSEASG00005014800	MBD4	81	61.853	ENSSARG00000004496	-	80	61.853	Sorex_araneus
ENSEASG00005014800	MBD4	87	52.941	ENSSPUG00000017344	MBD4	91	52.941	Sphenodon_punctatus
ENSEASG00005014800	MBD4	100	78.010	ENSSSCG00000033303	MBD4	100	78.010	Sus_scrofa
ENSEASG00005014800	MBD4	86	39.526	ENSTNIG00000017927	mbd4	100	39.526	Tetraodon_nigroviridis
ENSEASG00005014800	MBD4	88	62.385	ENSTBEG00000003041	-	87	62.385	Tupaia_belangeri
ENSEASG00005014800	MBD4	95	81.901	ENSTTRG00000011265	MBD4	98	81.901	Tursiops_truncatus
ENSEASG00005014800	MBD4	87	81.162	ENSUAMG00000000814	MBD4	100	81.162	Ursus_americanus
ENSEASG00005014800	MBD4	100	80.769	ENSUMAG00000017542	MBD4	100	80.769	Ursus_maritimus
ENSEASG00005014800	MBD4	67	78.873	ENSVPAG00000004040	-	69	78.873	Vicugna_pacos
ENSEASG00005014800	MBD4	100	79.965	ENSVVUG00000014222	MBD4	99	79.965	Vulpes_vulpes