EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005014832 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 136139 bases
Position: chrPSZQ01000419.1:4830607-4966745
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005026288	ResIII	PF04851.15	8.4e-07	1	1
ENSEASP00005026041	ResIII	PF04851.15	1.3e-06	1	1
ENSEASP00005026374	ResIII	PF04851.15	1.4e-06	1	1
ENSEASP00005026416	ResIII	PF04851.15	1.4e-06	1	1
ENSEASP00005026203	ResIII	PF04851.15	1.5e-06	1	1
ENSEASP00005026149	ResIII	PF04851.15	1.5e-06	1	1
ENSEASP00005026347	ResIII	PF04851.15	1.7e-06	1	1
ENSEASP00005026345	ResIII	PF04851.15	5.9e-06	1	1
ENSEASP00005025934	ResIII	PF04851.15	6.3e-06	1	1
ENSEASP00005026374	BRK	PF07533.16	5.4e-31	1	2
ENSEASP00005026374	BRK	PF07533.16	5.4e-31	2	2
ENSEASP00005026416	BRK	PF07533.16	6e-31	1	2
ENSEASP00005026416	BRK	PF07533.16	6e-31	2	2
ENSEASP00005026347	BRK	PF07533.16	8.1e-31	1	2
ENSEASP00005026347	BRK	PF07533.16	8.1e-31	2	2
ENSEASP00005026041	BRK	PF07533.16	9.8e-31	1	2
ENSEASP00005026041	BRK	PF07533.16	9.8e-31	2	2
ENSEASP00005026345	BRK	PF07533.16	1.1e-30	1	2
ENSEASP00005026345	BRK	PF07533.16	1.1e-30	2	2
ENSEASP00005025934	BRK	PF07533.16	1.3e-30	1	2
ENSEASP00005025934	BRK	PF07533.16	1.3e-30	2	2
ENSEASP00005026203	BRK	PF07533.16	1.1e-28	1	2
ENSEASP00005026203	BRK	PF07533.16	1.1e-28	2	2
ENSEASP00005026149	BRK	PF07533.16	1.1e-28	1	2
ENSEASP00005026149	BRK	PF07533.16	1.1e-28	2	2
ENSEASP00005026288	BRK	PF07533.16	3.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005028550	CHD9-205	7482	-	ENSEASP00005026288	2493 (aa)	-	-
ENSEAST00005028688	CHD9-209	6120	-	ENSEASP00005026416	2039 (aa)	-	-
ENSEAST00005028271	CHD9-202	7614	-	ENSEASP00005026041	2537 (aa)	-	-
ENSEAST00005028391	CHD9-203	7608	-	ENSEASP00005026149	2535 (aa)	-	-
ENSEAST00005028644	CHD9-208	5907	-	ENSEASP00005026374	1968 (aa)	-	-
ENSEAST00005028154	CHD9-201	8709	-	ENSEASP00005025934	2902 (aa)	-	-
ENSEAST00005028611	CHD9-206	8169	-	ENSEASP00005026345	2722 (aa)	-	-
ENSEAST00005028613	CHD9-207	7023	-	ENSEASP00005026347	2340 (aa)	-	-
ENSEAST00005028450	CHD9-204	7581	-	ENSEASP00005026203	2526 (aa)	-	-

Gene Model

Click here to download ENSEASG00005014832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005014832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005014832	CHD9	92	68.678	ENSEASG00005023433	CHD6	95	75.483
ENSEASG00005014832	CHD9	85	70.864	ENSEASG00005010882	CHD8	89	67.784
ENSEASG00005014832	CHD9	93	69.188	ENSEASG00005016258	CHD7	83	69.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005014832	CHD9	100	96.244	ENSG00000177200	CHD9	100	98.113	Homo_sapiens
ENSEASG00005014832	CHD9	95	79.323	ENSAPOG00000023034	chd9	88	79.352	Acanthochromis_polyacanthus
ENSEASG00005014832	CHD9	100	97.176	ENSAMEG00000016232	CHD9	100	97.176	Ailuropoda_melanoleuca
ENSEASG00005014832	CHD9	92	78.664	ENSACIG00000004097	chd9	85	76.384	Amphilophus_citrinellus
ENSEASG00005014832	CHD9	95	79.325	ENSAOCG00000005487	chd9	98	68.380	Amphiprion_ocellaris
ENSEASG00005014832	CHD9	95	79.697	ENSAPEG00000009859	chd9	88	79.732	Amphiprion_percula
ENSEASG00005014832	CHD9	95	79.522	ENSATEG00000002748	chd9	89	78.796	Anabas_testudineus
ENSEASG00005014832	CHD9	99	91.035	ENSAPLG00000002826	CHD9	89	89.271	Anas_platyrhynchos
ENSEASG00005014832	CHD9	99	88.712	ENSACAG00000016150	CHD9	98	81.148	Anolis_carolinensis
ENSEASG00005014832	CHD9	100	96.210	ENSANAG00000015630	CHD9	100	96.210	Aotus_nancymaae
ENSEASG00005014832	CHD9	95	78.664	ENSACLG00000016899	chd9	86	78.581	Astatotilapia_calliptera
ENSEASG00005014832	CHD9	99	76.956	ENSAMXG00000005652	chd9	95	72.940	Astyanax_mexicanus
ENSEASG00005014832	CHD9	100	96.486	ENSBTAG00000002287	CHD9	100	96.486	Bos_taurus
ENSEASG00005014832	CHD9	100	95.453	ENSCJAG00000001573	CHD9	98	97.802	Callithrix_jacchus
ENSEASG00005014832	CHD9	100	97.105	ENSCAFG00000009699	CHD9	100	97.105	Canis_familiaris
ENSEASG00005014832	CHD9	100	97.105	ENSCAFG00020002879	CHD9	98	99.267	Canis_lupus_dingo
ENSEASG00005014832	CHD9	99	97.493	ENSCHIG00000021000	CHD9	94	93.644	Capra_hircus
ENSEASG00005014832	CHD9	100	96.278	ENSTSYG00000007693	CHD9	100	96.278	Carlito_syrichta
ENSEASG00005014832	CHD9	92	93.846	ENSCAPG00000011604	CHD9	85	89.922	Cavia_aperea
ENSEASG00005014832	CHD9	100	92.671	ENSCPOG00000036544	CHD9	99	90.878	Cavia_porcellus
ENSEASG00005014832	CHD9	100	94.935	ENSCCAG00000036178	CHD9	98	97.070	Cebus_capucinus
ENSEASG00005014832	CHD9	100	95.487	ENSCATG00000036753	CHD9	98	97.802	Cercocebus_atys
ENSEASG00005014832	CHD9	99	95.248	ENSCLAG00000007137	CHD9	99	97.225	Chinchilla_lanigera
ENSEASG00005014832	CHD9	100	95.076	ENSCSAG00000005311	CHD9	99	95.492	Chlorocebus_sabaeus
ENSEASG00005014832	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSEASG00005014832	CHD9	99	92.213	ENSCPBG00000012459	CHD9	99	91.980	Chrysemys_picta_bellii
ENSEASG00005014832	CHD9	100	96.073	ENSCANG00000030349	CHD9	100	96.073	Colobus_angolensis_palliatus
ENSEASG00005014832	CHD9	99	94.319	ENSCGRG00001016150	Chd9	99	91.395	Cricetulus_griseus_chok1gshd
ENSEASG00005014832	CHD9	99	94.319	ENSCGRG00000012850	Chd9	99	95.954	Cricetulus_griseus_crigri
ENSEASG00005014832	CHD9	93	78.990	ENSCSEG00000009209	chd9	85	75.613	Cynoglossus_semilaevis
ENSEASG00005014832	CHD9	92	81.114	ENSCVAG00000016195	chd9	88	78.270	Cyprinodon_variegatus
ENSEASG00005014832	CHD9	96	78.877	ENSDARG00000074498	chd9	86	76.704	Danio_rerio
ENSEASG00005014832	CHD9	99	95.412	ENSDNOG00000006045	CHD9	99	95.328	Dasypus_novemcinctus
ENSEASG00005014832	CHD9	91	93.797	ENSDORG00000008523	-	99	92.889	Dipodomys_ordii
ENSEASG00005014832	CHD9	94	97.895	ENSETEG00000009565	CHD9	93	97.895	Echinops_telfairi
ENSEASG00005014832	CHD9	100	99.526	ENSECAG00000011505	CHD9	100	99.518	Equus_caballus
ENSEASG00005014832	CHD9	83	97.842	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSEASG00005014832	CHD9	94	81.085	ENSELUG00000006031	chd9	85	78.820	Esox_lucius
ENSEASG00005014832	CHD9	100	96.899	ENSFCAG00000022534	CHD9	98	98.901	Felis_catus
ENSEASG00005014832	CHD9	99	91.114	ENSFALG00000013276	CHD9	99	88.431	Ficedula_albicollis
ENSEASG00005014832	CHD9	100	94.867	ENSFDAG00000021037	CHD9	99	94.450	Fukomys_damarensis
ENSEASG00005014832	CHD9	95	79.127	ENSFHEG00000006068	chd9	87	77.646	Fundulus_heteroclitus
ENSEASG00005014832	CHD9	85	78.656	ENSGMOG00000006040	chd9	83	76.934	Gadus_morhua
ENSEASG00005014832	CHD9	95	89.055	ENSGALG00000039178	CHD9	98	85.591	Gallus_gallus
ENSEASG00005014832	CHD9	96	78.214	ENSGAFG00000010014	chd9	86	77.540	Gambusia_affinis
ENSEASG00005014832	CHD9	97	78.173	ENSGACG00000016694	chd9	96	75.092	Gasterosteus_aculeatus
ENSEASG00005014832	CHD9	100	96.004	ENSGGOG00000014816	CHD9	98	98.168	Gorilla_gorilla
ENSEASG00005014832	CHD9	95	78.890	ENSHBUG00000023322	chd9	89	77.534	Haplochromis_burtoni
ENSEASG00005014832	CHD9	100	94.798	ENSHGLG00000014938	CHD9	99	97.688	Heterocephalus_glaber_female
ENSEASG00005014832	CHD9	96	76.890	ENSHCOG00000000937	chd9	85	76.381	Hippocampus_comes
ENSEASG00005014832	CHD9	96	80.984	ENSIPUG00000016448	chd9	98	72.993	Ictalurus_punctatus
ENSEASG00005014832	CHD9	100	94.831	ENSSTOG00000022273	CHD9	99	97.803	Ictidomys_tridecemlineatus
ENSEASG00005014832	CHD9	91	95.485	ENSJJAG00000015741	-	99	94.132	Jaculus_jaculus
ENSEASG00005014832	CHD9	96	76.891	ENSKMAG00000016784	chd9	91	72.543	Kryptolebias_marmoratus
ENSEASG00005014832	CHD9	95	77.793	ENSLBEG00000012077	chd9	98	66.173	Labrus_bergylta
ENSEASG00005014832	CHD9	99	79.743	ENSLACG00000005557	CHD9	89	77.831	Latimeria_chalumnae
ENSEASG00005014832	CHD9	97	84.433	ENSLOCG00000007225	chd9	95	77.333	Lepisosteus_oculatus
ENSEASG00005014832	CHD9	100	94.936	ENSLAFG00000015374	CHD9	99	94.936	Loxodonta_africana
ENSEASG00005014832	CHD9	100	96.039	ENSMFAG00000041354	CHD9	98	97.802	Macaca_fascicularis
ENSEASG00005014832	CHD9	100	96.073	ENSMMUG00000016310	CHD9	98	97.802	Macaca_mulatta
ENSEASG00005014832	CHD9	100	96.006	ENSMNEG00000031494	CHD9	100	96.252	Macaca_nemestrina
ENSEASG00005014832	CHD9	100	96.073	ENSMLEG00000043219	CHD9	98	97.802	Mandrillus_leucophaeus
ENSEASG00005014832	CHD9	95	78.675	ENSMAMG00000003909	chd9	87	78.211	Mastacembelus_armatus
ENSEASG00005014832	CHD9	96	78.261	ENSMZEG00005006581	chd9	94	72.971	Maylandia_zebra
ENSEASG00005014832	CHD9	99	83.741	ENSMGAG00000004642	CHD9	88	82.488	Meleagris_gallopavo
ENSEASG00005014832	CHD9	100	96.175	ENSMICG00000016679	CHD9	100	96.175	Microcebus_murinus
ENSEASG00005014832	CHD9	96	78.474	ENSMMOG00000016406	chd9	88	78.264	Mola_mola
ENSEASG00005014832	CHD9	96	82.917	ENSMODG00000013142	-	99	92.525	Monodelphis_domestica
ENSEASG00005014832	CHD9	95	79.824	ENSMALG00000013306	chd9	88	77.638	Monopterus_albus
ENSEASG00005014832	CHD9	99	94.152	MGP_CAROLIEiJ_G0031364	Chd9	99	90.430	Mus_caroli
ENSEASG00005014832	CHD9	99	94.079	ENSMUSG00000056608	Chd9	99	95.145	Mus_musculus
ENSEASG00005014832	CHD9	99	94.079	MGP_PahariEiJ_G0022964	Chd9	99	88.431	Mus_pahari
ENSEASG00005014832	CHD9	99	93.483	MGP_SPRETEiJ_G0032483	Chd9	99	90.288	Mus_spretus
ENSEASG00005014832	CHD9	100	97.071	ENSMPUG00000003285	CHD9	100	97.071	Mustela_putorius_furo
ENSEASG00005014832	CHD9	100	94.935	ENSMLUG00000004456	CHD9	99	94.518	Myotis_lucifugus
ENSEASG00005014832	CHD9	96	78.653	ENSNBRG00000009423	chd9	94	72.841	Neolamprologus_brichardi
ENSEASG00005014832	CHD9	98	93.714	ENSNLEG00000001026	CHD9	100	96.359	Nomascus_leucogenys
ENSEASG00005014832	CHD9	80	96.732	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSEASG00005014832	CHD9	86	98.649	ENSOPRG00000011168	CHD9	85	97.714	Ochotona_princeps
ENSEASG00005014832	CHD9	99	94.656	ENSODEG00000004466	CHD9	99	94.417	Octodon_degus
ENSEASG00005014832	CHD9	96	78.292	ENSONIG00000002816	chd9	95	73.732	Oreochromis_niloticus
ENSEASG00005014832	CHD9	99	91.210	ENSOANG00000013401	CHD9	99	86.902	Ornithorhynchus_anatinus
ENSEASG00005014832	CHD9	99	96.076	ENSOCUG00000001016	CHD9	99	97.104	Oryctolagus_cuniculus
ENSEASG00005014832	CHD9	94	79.721	ENSORLG00000013810	chd9	88	77.616	Oryzias_latipes
ENSEASG00005014832	CHD9	94	80.956	ENSORLG00020020665	chd9	87	78.873	Oryzias_latipes_hni
ENSEASG00005014832	CHD9	94	79.736	ENSORLG00015019126	chd9	86	77.079	Oryzias_latipes_hsok
ENSEASG00005014832	CHD9	59	77.859	ENSOMEG00000015978	chd9	89	77.670	Oryzias_melastigma
ENSEASG00005014832	CHD9	100	95.009	ENSOGAG00000002110	CHD9	99	94.731	Otolemur_garnettii
ENSEASG00005014832	CHD9	100	96.284	ENSOARG00000017664	CHD9	100	96.284	Ovis_aries
ENSEASG00005014832	CHD9	99	96.213	ENSPPAG00000039388	-	100	95.977	Pan_paniscus
ENSEASG00005014832	CHD9	100	96.864	ENSPPRG00000004801	CHD9	98	98.901	Panthera_pardus
ENSEASG00005014832	CHD9	100	95.865	ENSPTIG00000021854	CHD9	100	95.865	Panthera_tigris_altaica
ENSEASG00005014832	CHD9	100	96.313	ENSPTRG00000008113	CHD9	100	96.313	Pan_troglodytes
ENSEASG00005014832	CHD9	100	96.107	ENSPANG00000019307	CHD9	99	96.898	Papio_anubis
ENSEASG00005014832	CHD9	94	81.912	ENSPKIG00000021876	chd9	95	74.731	Paramormyrops_kingsleyae
ENSEASG00005014832	CHD9	97	77.028	ENSPKIG00000025401	-	88	77.984	Paramormyrops_kingsleyae
ENSEASG00005014832	CHD9	74	82.470	ENSPSIG00000008099	CHD9	99	84.757	Pelodiscus_sinensis
ENSEASG00005014832	CHD9	72	70.287	ENSPMAG00000006035	-	91	67.671	Petromyzon_marinus
ENSEASG00005014832	CHD9	98	87.434	ENSPCIG00000017215	CHD9	97	90.224	Phascolarctos_cinereus
ENSEASG00005014832	CHD9	95	78.000	ENSPFOG00000015839	chd9	82	77.654	Poecilia_formosa
ENSEASG00005014832	CHD9	96	78.495	ENSPLAG00000011118	chd9	98	67.176	Poecilia_latipinna
ENSEASG00005014832	CHD9	95	78.351	ENSPMEG00000015106	chd9	81	78.581	Poecilia_mexicana
ENSEASG00005014832	CHD9	96	78.270	ENSPREG00000006473	chd9	98	68.029	Poecilia_reticulata
ENSEASG00005014832	CHD9	100	96.106	ENSPPYG00000007348	CHD9	99	96.079	Pongo_abelii
ENSEASG00005014832	CHD9	82	95.683	ENSPCAG00000007564	CHD9	86	96.507	Procavia_capensis
ENSEASG00005014832	CHD9	100	95.245	ENSPCOG00000028433	CHD9	98	98.535	Propithecus_coquereli
ENSEASG00005014832	CHD9	96	96.386	ENSPVAG00000015617	CHD9	97	94.919	Pteropus_vampyrus
ENSEASG00005014832	CHD9	96	78.094	ENSPNYG00000010947	chd9	94	72.841	Pundamilia_nyererei
ENSEASG00005014832	CHD9	96	79.785	ENSPNAG00000024141	chd9	87	79.656	Pygocentrus_nattereri
ENSEASG00005014832	CHD9	98	85.852	ENSRNOG00000049302	Chd9	100	90.349	Rattus_norvegicus
ENSEASG00005014832	CHD9	99	95.849	ENSRBIG00000035553	CHD9	100	96.938	Rhinopithecus_bieti
ENSEASG00005014832	CHD9	99	95.921	ENSRROG00000033278	CHD9	100	96.994	Rhinopithecus_roxellana
ENSEASG00005014832	CHD9	100	96.141	ENSSBOG00000030240	CHD9	100	96.141	Saimiri_boliviensis_boliviensis
ENSEASG00005014832	CHD9	99	91.788	ENSSHAG00000002719	CHD9	99	88.193	Sarcophilus_harrisii
ENSEASG00005014832	CHD9	96	79.491	ENSSFOG00015001327	chd9	86	78.420	Scleropages_formosus
ENSEASG00005014832	CHD9	96	81.886	ENSSFOG00015020209	chd9	99	70.164	Scleropages_formosus
ENSEASG00005014832	CHD9	92	79.627	ENSSMAG00000008953	chd9	91	76.992	Scophthalmus_maximus
ENSEASG00005014832	CHD9	95	79.215	ENSSDUG00000006139	chd9	93	74.447	Seriola_dumerili
ENSEASG00005014832	CHD9	96	78.367	ENSSLDG00000017818	chd9	88	78.854	Seriola_lalandi_dorsalis
ENSEASG00005014832	CHD9	97	96.422	ENSSARG00000010632	CHD9	85	96.422	Sorex_araneus
ENSEASG00005014832	CHD9	95	78.607	ENSSPAG00000021649	chd9	87	77.762	Stegastes_partitus
ENSEASG00005014832	CHD9	99	95.362	ENSSSCG00000033591	CHD9	90	95.024	Sus_scrofa
ENSEASG00005014832	CHD9	98	83.333	ENSTGUG00000007476	CHD9	100	85.545	Taeniopygia_guttata
ENSEASG00005014832	CHD9	98	77.922	ENSTRUG00000009125	chd9	79	78.030	Takifugu_rubripes
ENSEASG00005014832	CHD9	76	81.951	ENSTNIG00000003825	chd9	92	81.951	Tetraodon_nigroviridis
ENSEASG00005014832	CHD9	67	97.122	ENSTBEG00000016052	-	81	95.045	Tupaia_belangeri
ENSEASG00005014832	CHD9	98	94.788	ENSTTRG00000012674	CHD9	90	96.282	Tursiops_truncatus
ENSEASG00005014832	CHD9	84	93.548	ENSUAMG00000022706	CHD9	98	99.267	Ursus_americanus
ENSEASG00005014832	CHD9	95	99.048	ENSUMAG00000004043	CHD9	99	99.048	Ursus_maritimus
ENSEASG00005014832	CHD9	97	95.681	ENSVPAG00000001374	CHD9	97	95.681	Vicugna_pacos
ENSEASG00005014832	CHD9	100	97.174	ENSVVUG00000019435	CHD9	100	97.174	Vulpes_vulpes
ENSEASG00005014832	CHD9	97	86.181	ENSXETG00000000349	chd9	96	76.996	Xenopus_tropicalis
ENSEASG00005014832	CHD9	94	80.221	ENSXCOG00000012997	chd9	98	67.231	Xiphophorus_couchianus
ENSEASG00005014832	CHD9	96	78.214	ENSXMAG00000016192	chd9	99	67.780	Xiphophorus_maculatus