EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005015424 (Gene tree)
Gene ID: -
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 95401 bases
Position: chrPSZQ01000769.1:1505175-1600575
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005022589	ResIII	PF04851.15	1.1e-11	1	1
ENSEASP00005022586	ResIII	PF04851.15	6.5e-11	1	1
ENSEASP00005022586	DEAD	PF00270.29	1.1e-25	1	1
ENSEASP00005022589	DEAD	PF00270.29	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005024509	HFM1-202	1395	-	ENSEASP00005022589	464 (aa)	-	-
ENSEAST00005024506	HFM1-201	2997	-	ENSEASP00005022586	998 (aa)	-	-

Gene Model

Click here to download ENSEASG00005015424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005015424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005015424	HFM1	77	32.558	ENSEASG00005001884	SNRNP200	65	32.558
ENSEASG00005015424	HFM1	64	35.604	ENSEASG00005006324	ASCC3	57	35.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005015424	HFM1	98	85.435	ENSG00000162669	HFM1	100	84.892	Homo_sapiens
ENSEASG00005015424	HFM1	80	66.501	ENSAPOG00000005304	hfm1	90	66.501	Acanthochromis_polyacanthus
ENSEASG00005015424	HFM1	97	87.882	ENSAMEG00000000432	HFM1	70	87.882	Ailuropoda_melanoleuca
ENSEASG00005015424	HFM1	96	61.585	ENSACIG00000021553	hfm1	90	61.585	Amphilophus_citrinellus
ENSEASG00005015424	HFM1	79	68.892	ENSAOCG00000022839	hfm1	96	68.892	Amphiprion_ocellaris
ENSEASG00005015424	HFM1	79	69.066	ENSAPEG00000014316	hfm1	96	69.066	Amphiprion_percula
ENSEASG00005015424	HFM1	96	57.782	ENSATEG00000019181	hfm1	91	57.005	Anabas_testudineus
ENSEASG00005015424	HFM1	98	72.266	ENSAPLG00000013639	HFM1	71	72.266	Anas_platyrhynchos
ENSEASG00005015424	HFM1	97	86.290	ENSANAG00000029513	HFM1	70	86.290	Aotus_nancymaae
ENSEASG00005015424	HFM1	96	59.296	ENSACLG00000009033	hfm1	93	64.713	Astatotilapia_calliptera
ENSEASG00005015424	HFM1	90	63.542	ENSAMXG00000006108	hfm1	66	63.542	Astyanax_mexicanus
ENSEASG00005015424	HFM1	97	86.149	ENSBTAG00000020856	HFM1	70	86.149	Bos_taurus
ENSEASG00005015424	HFM1	97	84.798	ENSCJAG00000001843	HFM1	71	84.798	Callithrix_jacchus
ENSEASG00005015424	HFM1	97	86.726	ENSCAFG00000020187	HFM1	72	85.606	Canis_familiaris
ENSEASG00005015424	HFM1	98	84.783	ENSCAFG00020013595	-	98	84.783	Canis_lupus_dingo
ENSEASG00005015424	HFM1	94	77.333	ENSCHIG00000018623	-	95	77.333	Capra_hircus
ENSEASG00005015424	HFM1	97	83.957	ENSTSYG00000014250	HFM1	70	83.957	Carlito_syrichta
ENSEASG00005015424	HFM1	99	82.444	ENSCPOG00000007421	HFM1	73	82.444	Cavia_porcellus
ENSEASG00005015424	HFM1	97	84.501	ENSCCAG00000033206	HFM1	71	84.501	Cebus_capucinus
ENSEASG00005015424	HFM1	98	85.217	ENSCATG00000030987	HFM1	70	84.995	Cercocebus_atys
ENSEASG00005015424	HFM1	97	83.096	ENSCLAG00000005173	HFM1	71	83.096	Chinchilla_lanigera
ENSEASG00005015424	HFM1	60	96.532	ENSCHOG00000011824	-	50	96.532	Choloepus_hoffmanni
ENSEASG00005015424	HFM1	70	53.343	ENSCSAVG00000005094	-	100	53.343	Ciona_savignyi
ENSEASG00005015424	HFM1	98	84.783	ENSCANG00000034052	-	97	84.783	Colobus_angolensis_palliatus
ENSEASG00005015424	HFM1	96	78.239	ENSCGRG00001016995	Hfm1	71	78.239	Cricetulus_griseus_chok1gshd
ENSEASG00005015424	HFM1	97	81.065	ENSCGRG00000017181	Hfm1	71	81.065	Cricetulus_griseus_crigri
ENSEASG00005015424	HFM1	98	56.676	ENSCSEG00000017659	hfm1	93	57.061	Cynoglossus_semilaevis
ENSEASG00005015424	HFM1	71	68.864	ENSCVAG00000005075	hfm1	86	68.864	Cyprinodon_variegatus
ENSEASG00005015424	HFM1	80	67.209	ENSDARG00000104288	hfm1	72	67.209	Danio_rerio
ENSEASG00005015424	HFM1	97	83.871	ENSDNOG00000004776	HFM1	71	83.871	Dasypus_novemcinctus
ENSEASG00005015424	HFM1	97	81.202	ENSDORG00000014661	Hfm1	71	81.202	Dipodomys_ordii
ENSEASG00005015424	HFM1	98	97.812	ENSECAG00000024039	HFM1	71	91.202	Equus_caballus
ENSEASG00005015424	HFM1	84	65.583	ENSELUG00000018944	hfm1	95	65.583	Esox_lucius
ENSEASG00005015424	HFM1	98	86.863	ENSFCAG00000029116	HFM1	71	86.863	Felis_catus
ENSEASG00005015424	HFM1	99	71.470	ENSFALG00000001781	HFM1	72	71.470	Ficedula_albicollis
ENSEASG00005015424	HFM1	97	82.119	ENSFDAG00000020816	HFM1	71	82.119	Fukomys_damarensis
ENSEASG00005015424	HFM1	90	59.428	ENSGMOG00000017436	hfm1	98	59.428	Gadus_morhua
ENSEASG00005015424	HFM1	96	62.907	ENSGAFG00000018093	hfm1	95	62.907	Gambusia_affinis
ENSEASG00005015424	HFM1	90	60.485	ENSGACG00000015686	hfm1	98	60.485	Gasterosteus_aculeatus
ENSEASG00005015424	HFM1	56	88.298	ENSGAGG00000025197	-	76	88.298	Gopherus_agassizii
ENSEASG00005015424	HFM1	98	84.783	ENSGGOG00000038524	HFM1	70	85.489	Gorilla_gorilla
ENSEASG00005015424	HFM1	87	64.989	ENSHBUG00000007309	hfm1	93	60.600	Haplochromis_burtoni
ENSEASG00005015424	HFM1	98	78.261	ENSHGLG00000007780	-	98	78.261	Heterocephalus_glaber_female
ENSEASG00005015424	HFM1	98	76.559	ENSHGLG00100019217	-	98	76.559	Heterocephalus_glaber_male
ENSEASG00005015424	HFM1	80	64.170	ENSHCOG00000019632	hfm1	95	64.170	Hippocampus_comes
ENSEASG00005015424	HFM1	95	62.016	ENSIPUG00000017020	hfm1	87	66.500	Ictalurus_punctatus
ENSEASG00005015424	HFM1	98	79.130	ENSSTOG00000008477	-	98	79.130	Ictidomys_tridecemlineatus
ENSEASG00005015424	HFM1	91	84.916	ENSJJAG00000017198	Hfm1	68	84.916	Jaculus_jaculus
ENSEASG00005015424	HFM1	84	63.291	ENSKMAG00000002282	hfm1	89	63.291	Kryptolebias_marmoratus
ENSEASG00005015424	HFM1	96	61.128	ENSLBEG00000006759	hfm1	92	65.918	Labrus_bergylta
ENSEASG00005015424	HFM1	96	64.976	ENSLACG00000010698	HFM1	99	65.072	Latimeria_chalumnae
ENSEASG00005015424	HFM1	96	64.398	ENSLOCG00000004931	hfm1	93	64.497	Lepisosteus_oculatus
ENSEASG00005015424	HFM1	66	93.282	ENSLAFG00000015903	-	88	93.282	Loxodonta_africana
ENSEASG00005015424	HFM1	98	83.913	ENSMFAG00000003649	HFM1	70	81.532	Macaca_fascicularis
ENSEASG00005015424	HFM1	98	84.199	ENSMMUG00000006819	HFM1	70	85.094	Macaca_mulatta
ENSEASG00005015424	HFM1	98	84.130	ENSMNEG00000039833	-	97	84.130	Macaca_nemestrina
ENSEASG00005015424	HFM1	98	85.217	ENSMLEG00000027571	-	97	85.217	Mandrillus_leucophaeus
ENSEASG00005015424	HFM1	84	66.389	ENSMAMG00000004623	hfm1	94	66.625	Mastacembelus_armatus
ENSEASG00005015424	HFM1	96	59.296	ENSMZEG00005004679	hfm1	93	64.713	Maylandia_zebra
ENSEASG00005015424	HFM1	75	79.518	ENSMGAG00000008437	HFM1	93	79.518	Meleagris_gallopavo
ENSEASG00005015424	HFM1	97	81.514	ENSMAUG00000018858	Hfm1	71	81.514	Mesocricetus_auratus
ENSEASG00005015424	HFM1	97	85.419	ENSMICG00000037935	HFM1	70	85.419	Microcebus_murinus
ENSEASG00005015424	HFM1	97	80.493	ENSMOCG00000014812	Hfm1	71	80.493	Microtus_ochrogaster
ENSEASG00005015424	HFM1	84	66.390	ENSMMOG00000006148	hfm1	92	66.390	Mola_mola
ENSEASG00005015424	HFM1	95	61.196	ENSMALG00000002401	hfm1	91	67.207	Monopterus_albus
ENSEASG00005015424	HFM1	89	95.146	MGP_CAROLIEiJ_G0027496	Hfm1	97	67.866	Mus_caroli
ENSEASG00005015424	HFM1	98	80.117	ENSMUSG00000043410	Hfm1	100	70.048	Mus_musculus
ENSEASG00005015424	HFM1	98	80.117	MGP_PahariEiJ_G0017268	Hfm1	100	70.048	Mus_pahari
ENSEASG00005015424	HFM1	98	80.019	MGP_SPRETEiJ_G0028495	Hfm1	100	69.807	Mus_spretus
ENSEASG00005015424	HFM1	97	85.904	ENSMPUG00000004594	HFM1	71	85.904	Mustela_putorius_furo
ENSEASG00005015424	HFM1	97	86.785	ENSMLUG00000010200	HFM1	70	86.785	Myotis_lucifugus
ENSEASG00005015424	HFM1	87	60.874	ENSNBRG00000002910	hfm1	94	64.713	Neolamprologus_brichardi
ENSEASG00005015424	HFM1	98	85.217	ENSNLEG00000010285	HFM1	70	79.626	Nomascus_leucogenys
ENSEASG00005015424	HFM1	88	75.217	ENSMEUG00000015788	HFM1	64	75.217	Notamacropus_eugenii
ENSEASG00005015424	HFM1	90	82.080	ENSOPRG00000013916	HFM1	63	82.080	Ochotona_princeps
ENSEASG00005015424	HFM1	98	76.356	ENSODEG00000006243	-	98	76.356	Octodon_degus
ENSEASG00005015424	HFM1	95	60.479	ENSONIG00000010590	hfm1	96	60.552	Oreochromis_niloticus
ENSEASG00005015424	HFM1	83	72.727	ENSOCUG00000010974	-	95	72.727	Oryctolagus_cuniculus
ENSEASG00005015424	HFM1	80	64.956	ENSORLG00000026844	hfm1	98	64.956	Oryzias_latipes
ENSEASG00005015424	HFM1	89	55.342	ENSORLG00020002951	hfm1	75	54.795	Oryzias_latipes_hni
ENSEASG00005015424	HFM1	96	57.321	ENSOMEG00000016474	hfm1	73	57.321	Oryzias_melastigma
ENSEASG00005015424	HFM1	98	80.217	ENSOGAG00000032369	HFM1	77	87.924	Otolemur_garnettii
ENSEASG00005015424	HFM1	97	86.081	ENSOARG00000015812	HFM1	71	86.081	Ovis_aries
ENSEASG00005015424	HFM1	98	85.870	ENSPPAG00000024582	HFM1	76	85.587	Pan_paniscus
ENSEASG00005015424	HFM1	98	86.791	ENSPPRG00000003270	HFM1	71	86.791	Panthera_pardus
ENSEASG00005015424	HFM1	98	86.595	ENSPTIG00000018881	HFM1	71	86.595	Panthera_tigris_altaica
ENSEASG00005015424	HFM1	98	85.652	ENSPTRG00000000948	HFM1	70	85.587	Pan_troglodytes
ENSEASG00005015424	HFM1	98	85.000	ENSPANG00000009838	HFM1	70	84.995	Papio_anubis
ENSEASG00005015424	HFM1	83	66.667	ENSPKIG00000003810	hfm1	92	68.335	Paramormyrops_kingsleyae
ENSEASG00005015424	HFM1	80	65.793	ENSPMGG00000011059	hfm1	97	65.793	Periophthalmus_magnuspinnatus
ENSEASG00005015424	HFM1	97	82.069	ENSPEMG00000022852	Hfm1	70	82.069	Peromyscus_maniculatus_bairdii
ENSEASG00005015424	HFM1	98	75.000	ENSPCIG00000014233	HFM1	72	75.000	Phascolarctos_cinereus
ENSEASG00005015424	HFM1	96	61.546	ENSPFOG00000017194	hfm1	99	61.546	Poecilia_formosa
ENSEASG00005015424	HFM1	96	62.562	ENSPLAG00000000571	hfm1	90	62.562	Poecilia_latipinna
ENSEASG00005015424	HFM1	96	62.624	ENSPMEG00000019475	hfm1	91	62.624	Poecilia_mexicana
ENSEASG00005015424	HFM1	96	61.294	ENSPREG00000007803	hfm1	90	66.708	Poecilia_reticulata
ENSEASG00005015424	HFM1	98	84.565	ENSPPYG00000001163	HFM1	70	85.390	Pongo_abelii
ENSEASG00005015424	HFM1	68	95.146	ENSPCAG00000004289	-	51	95.146	Procavia_capensis
ENSEASG00005015424	HFM1	98	68.696	ENSPCOG00000026252	-	98	68.696	Propithecus_coquereli
ENSEASG00005015424	HFM1	98	79.783	ENSPVAG00000009713	HFM1	70	78.846	Pteropus_vampyrus
ENSEASG00005015424	HFM1	87	63.222	ENSPNYG00000001795	hfm1	93	64.713	Pundamilia_nyererei
ENSEASG00005015424	HFM1	80	68.493	ENSPNAG00000010865	hfm1	79	68.493	Pygocentrus_nattereri
ENSEASG00005015424	HFM1	98	79.475	ENSRNOG00000023299	Hfm1	71	79.475	Rattus_norvegicus
ENSEASG00005015424	HFM1	98	83.696	ENSRBIG00000033899	-	97	83.696	Rhinopithecus_bieti
ENSEASG00005015424	HFM1	98	84.130	ENSRROG00000045569	HFM1	70	84.896	Rhinopithecus_roxellana
ENSEASG00005015424	HFM1	98	81.957	ENSSBOG00000027456	HFM1	67	87.381	Saimiri_boliviensis_boliviensis
ENSEASG00005015424	HFM1	97	59.740	ENSSHAG00000014616	-	66	86.552	Sarcophilus_harrisii
ENSEASG00005015424	HFM1	90	63.430	ENSSFOG00015020129	hfm1	64	63.430	Scleropages_formosus
ENSEASG00005015424	HFM1	84	65.207	ENSSMAG00000006907	hfm1	85	65.207	Scophthalmus_maximus
ENSEASG00005015424	HFM1	80	66.292	ENSSDUG00000011424	hfm1	90	66.292	Seriola_dumerili
ENSEASG00005015424	HFM1	80	66.334	ENSSLDG00000016386	hfm1	89	66.334	Seriola_lalandi_dorsalis
ENSEASG00005015424	HFM1	83	67.866	ENSSARG00000009598	-	99	67.866	Sorex_araneus
ENSEASG00005015424	HFM1	86	74.894	ENSSPUG00000003380	-	88	74.894	Sphenodon_punctatus
ENSEASG00005015424	HFM1	95	60.632	ENSSPAG00000001023	hfm1	90	67.166	Stegastes_partitus
ENSEASG00005015424	HFM1	98	84.717	ENSSSCG00000006912	HFM1	78	84.492	Sus_scrofa
ENSEASG00005015424	HFM1	90	74.841	ENSTGUG00000006172	HFM1	98	74.841	Taeniopygia_guttata
ENSEASG00005015424	HFM1	83	75.835	ENSTBEG00000017533	-	99	75.835	Tupaia_belangeri
ENSEASG00005015424	HFM1	97	87.017	ENSTTRG00000013933	HFM1	71	87.017	Tursiops_truncatus
ENSEASG00005015424	HFM1	99	75.751	ENSUAMG00000008754	-	99	80.769	Ursus_americanus
ENSEASG00005015424	HFM1	98	84.565	ENSUMAG00000001345	-	98	84.565	Ursus_maritimus
ENSEASG00005015424	HFM1	97	84.956	ENSVPAG00000011331	HFM1	71	84.956	Vicugna_pacos
ENSEASG00005015424	HFM1	97	91.064	ENSVVUG00000020760	HFM1	99	91.064	Vulpes_vulpes
ENSEASG00005015424	HFM1	80	67.459	ENSXMAG00000004178	hfm1	89	67.459	Xiphophorus_maculatus