EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005015673 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 13187 bases
Position: chrPSZQ01006388.1:767248-780434
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005023009	tRNA-synt_1g	PF09334.11	7.6e-11	1	1
ENSEASP00005023009	Anticodon_1	PF08264.13	8.9e-33	1	1
ENSEASP00005023009	tRNA-synt_1	PF00133.22	2.3e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005024965	VARS-201	3909	-	ENSEASP00005023009	1264 (aa)	-	UPI00071A1EC8

Gene Model

Click here to download ENSEASG00005015673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005015673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005015673	VARS	81	50.193	ENSEASG00005019997	VARS2	94	52.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005015673	VARS	100	95.807	ENSG00000204394	VARS	100	98.276	Homo_sapiens
ENSEASG00005015673	VARS	98	65.116	ENSAPOG00000020691	vars	99	64.876	Acanthochromis_polyacanthus
ENSEASG00005015673	VARS	98	65.116	ENSAPOG00000020921	vars	99	64.876	Acanthochromis_polyacanthus
ENSEASG00005015673	VARS	100	96.126	ENSAMEG00000006417	VARS	100	96.126	Ailuropoda_melanoleuca
ENSEASG00005015673	VARS	100	65.804	ENSACIG00000013752	vars	100	65.566	Amphilophus_citrinellus
ENSEASG00005015673	VARS	100	65.012	ENSAOCG00000002447	vars	100	64.673	Amphiprion_ocellaris
ENSEASG00005015673	VARS	100	64.856	ENSAPEG00000010638	vars	99	64.875	Amphiprion_percula
ENSEASG00005015673	VARS	100	65.248	ENSATEG00000020219	vars	100	65.012	Anabas_testudineus
ENSEASG00005015673	VARS	90	70.312	ENSACAG00000029133	-	99	70.859	Anolis_carolinensis
ENSEASG00005015673	VARS	100	96.044	ENSANAG00000015453	VARS	100	96.044	Aotus_nancymaae
ENSEASG00005015673	VARS	100	65.426	ENSACLG00000025699	vars	97	65.190	Astatotilapia_calliptera
ENSEASG00005015673	VARS	94	66.472	ENSAMXG00000017716	vars	95	66.472	Astyanax_mexicanus
ENSEASG00005015673	VARS	100	96.519	ENSBTAG00000005631	VARS	100	96.519	Bos_taurus
ENSEASG00005015673	VARS	100	96.044	ENSCJAG00000002604	VARS	100	96.044	Callithrix_jacchus
ENSEASG00005015673	VARS	100	95.491	ENSCAFG00000000636	VARS	100	95.491	Canis_familiaris
ENSEASG00005015673	VARS	94	95.608	ENSCAFG00020020790	VARS	98	93.982	Canis_lupus_dingo
ENSEASG00005015673	VARS	100	96.677	ENSCHIG00000011008	VARS	100	96.677	Capra_hircus
ENSEASG00005015673	VARS	100	95.807	ENSTSYG00000001567	VARS	100	95.807	Carlito_syrichta
ENSEASG00005015673	VARS	91	91.176	ENSCAPG00000013736	VARS	99	91.176	Cavia_aperea
ENSEASG00005015673	VARS	100	92.168	ENSCPOG00000000870	VARS	100	92.168	Cavia_porcellus
ENSEASG00005015673	VARS	100	95.965	ENSCCAG00000035656	VARS	100	96.020	Cebus_capucinus
ENSEASG00005015673	VARS	100	95.491	ENSCATG00000022394	VARS	100	95.491	Cercocebus_atys
ENSEASG00005015673	VARS	88	89.939	ENSCLAG00000009470	VARS	92	89.939	Chinchilla_lanigera
ENSEASG00005015673	VARS	100	95.728	ENSCSAG00000008784	VARS	100	95.728	Chlorocebus_sabaeus
ENSEASG00005015673	VARS	77	74.846	ENSCPBG00000007943	VARS	96	74.846	Chrysemys_picta_bellii
ENSEASG00005015673	VARS	100	95.649	ENSCANG00000033570	VARS	100	95.649	Colobus_angolensis_palliatus
ENSEASG00005015673	VARS	100	93.592	ENSCGRG00001005686	Vars	100	93.592	Cricetulus_griseus_chok1gshd
ENSEASG00005015673	VARS	92	88.526	ENSCGRG00000013352	Vars	78	88.526	Cricetulus_griseus_crigri
ENSEASG00005015673	VARS	100	64.664	ENSCSEG00000019652	vars	100	64.506	Cynoglossus_semilaevis
ENSEASG00005015673	VARS	100	65.657	ENSCVAG00000022398	vars	100	65.657	Cyprinodon_variegatus
ENSEASG00005015673	VARS	100	64.806	ENSDARG00000044575	vars	100	64.802	Danio_rerio
ENSEASG00005015673	VARS	83	94.737	ENSDORG00000016433	Vars	94	94.737	Dipodomys_ordii
ENSEASG00005015673	VARS	69	87.703	ENSETEG00000003824	VARS	77	87.703	Echinops_telfairi
ENSEASG00005015673	VARS	57	61.813	ENSEBUG00000004637	vars	100	62.088	Eptatretus_burgeri
ENSEASG00005015673	VARS	51	70.833	ENSEBUG00000007086	vars	84	69.808	Eptatretus_burgeri
ENSEASG00005015673	VARS	100	99.763	ENSECAG00000014620	VARS	100	99.763	Equus_caballus
ENSEASG00005015673	VARS	83	92.042	ENSEEUG00000004116	VARS	83	92.042	Erinaceus_europaeus
ENSEASG00005015673	VARS	100	64.534	ENSELUG00000006550	vars	97	64.611	Esox_lucius
ENSEASG00005015673	VARS	100	96.677	ENSFCAG00000004510	VARS	100	96.677	Felis_catus
ENSEASG00005015673	VARS	82	92.680	ENSFDAG00000011401	VARS	100	92.680	Fukomys_damarensis
ENSEASG00005015673	VARS	100	65.734	ENSFHEG00000010672	vars	100	65.812	Fundulus_heteroclitus
ENSEASG00005015673	VARS	92	66.389	ENSGMOG00000014908	vars	97	66.389	Gadus_morhua
ENSEASG00005015673	VARS	100	65.992	ENSGAFG00000021630	vars	100	65.992	Gambusia_affinis
ENSEASG00005015673	VARS	92	66.583	ENSGACG00000009601	vars	98	66.250	Gasterosteus_aculeatus
ENSEASG00005015673	VARS	50	65.403	ENSGAGG00000006508	-	91	64.929	Gopherus_agassizii
ENSEASG00005015673	VARS	100	95.965	ENSGGOG00000011364	VARS	100	95.965	Gorilla_gorilla
ENSEASG00005015673	VARS	100	65.426	ENSHBUG00000017151	vars	97	65.190	Haplochromis_burtoni
ENSEASG00005015673	VARS	100	91.139	ENSHGLG00000011646	VARS	100	90.823	Heterocephalus_glaber_female
ENSEASG00005015673	VARS	93	83.555	ENSHGLG00100018062	VARS	100	83.472	Heterocephalus_glaber_male
ENSEASG00005015673	VARS	99	64.884	ENSHCOG00000012198	vars	99	64.825	Hippocampus_comes
ENSEASG00005015673	VARS	100	65.759	ENSIPUG00000005218	vars	100	65.759	Ictalurus_punctatus
ENSEASG00005015673	VARS	100	95.099	ENSSTOG00000013112	VARS	100	95.099	Ictidomys_tridecemlineatus
ENSEASG00005015673	VARS	100	92.089	ENSJJAG00000019749	-	100	91.456	Jaculus_jaculus
ENSEASG00005015673	VARS	100	72.706	ENSJJAG00000015343	-	99	73.815	Jaculus_jaculus
ENSEASG00005015673	VARS	100	65.403	ENSKMAG00000009455	vars	100	65.166	Kryptolebias_marmoratus
ENSEASG00005015673	VARS	100	63.874	ENSLBEG00000010341	vars	100	64.585	Labrus_bergylta
ENSEASG00005015673	VARS	94	62.120	ENSLACG00000015232	VARS	99	62.459	Latimeria_chalumnae
ENSEASG00005015673	VARS	100	66.562	ENSLOCG00000004240	vars	100	66.562	Lepisosteus_oculatus
ENSEASG00005015673	VARS	100	95.016	ENSLAFG00000023090	VARS	100	94.620	Loxodonta_africana
ENSEASG00005015673	VARS	100	95.728	ENSMFAG00000001032	VARS	100	95.728	Macaca_fascicularis
ENSEASG00005015673	VARS	100	95.728	ENSMMUG00000006828	VARS	100	95.728	Macaca_mulatta
ENSEASG00005015673	VARS	100	95.728	ENSMNEG00000042072	VARS	100	95.728	Macaca_nemestrina
ENSEASG00005015673	VARS	100	95.649	ENSMLEG00000039307	VARS	100	95.649	Mandrillus_leucophaeus
ENSEASG00005015673	VARS	100	64.957	ENSMAMG00000003949	vars	100	65.211	Mastacembelus_armatus
ENSEASG00005015673	VARS	100	65.426	ENSMZEG00005018327	vars	100	64.957	Maylandia_zebra
ENSEASG00005015673	VARS	100	93.275	ENSMAUG00000006715	Vars	100	93.275	Mesocricetus_auratus
ENSEASG00005015673	VARS	100	94.858	ENSMICG00000003548	VARS	100	94.858	Microcebus_murinus
ENSEASG00005015673	VARS	100	90.585	ENSMOCG00000015404	Vars	100	90.427	Microtus_ochrogaster
ENSEASG00005015673	VARS	100	64.701	ENSMMOG00000015801	vars	100	64.623	Mola_mola
ENSEASG00005015673	VARS	100	87.184	ENSMODG00000015204	-	100	87.184	Monodelphis_domestica
ENSEASG00005015673	VARS	99	65.066	ENSMALG00000022532	vars	99	64.854	Monopterus_albus
ENSEASG00005015673	VARS	100	93.908	MGP_CAROLIEiJ_G0021491	Vars	100	93.434	Mus_caroli
ENSEASG00005015673	VARS	100	93.750	ENSMUSG00000007029	Vars	100	93.275	Mus_musculus
ENSEASG00005015673	VARS	100	93.434	MGP_PahariEiJ_G0020486	Vars	100	93.038	Mus_pahari
ENSEASG00005015673	VARS	100	93.829	MGP_SPRETEiJ_G0022396	Vars	100	93.354	Mus_spretus
ENSEASG00005015673	VARS	100	96.203	ENSMPUG00000010821	VARS	100	96.203	Mustela_putorius_furo
ENSEASG00005015673	VARS	78	94.433	ENSMLUG00000013126	VARS	100	95.040	Myotis_lucifugus
ENSEASG00005015673	VARS	100	93.038	ENSNGAG00000012151	Vars	100	93.354	Nannospalax_galili
ENSEASG00005015673	VARS	100	65.349	ENSNBRG00000020520	vars	100	65.113	Neolamprologus_brichardi
ENSEASG00005015673	VARS	100	95.174	ENSNLEG00000006351	VARS	100	95.174	Nomascus_leucogenys
ENSEASG00005015673	VARS	100	83.307	ENSMEUG00000011378	VARS	100	83.307	Notamacropus_eugenii
ENSEASG00005015673	VARS	100	94.225	ENSOPRG00000003607	VARS	100	94.225	Ochotona_princeps
ENSEASG00005015673	VARS	100	91.218	ENSODEG00000017681	VARS	100	90.665	Octodon_degus
ENSEASG00005015673	VARS	100	65.833	ENSONIG00000013064	vars	99	68.522	Oreochromis_niloticus
ENSEASG00005015673	VARS	77	79.310	ENSOANG00000005400	VARS	98	78.478	Ornithorhynchus_anatinus
ENSEASG00005015673	VARS	100	92.496	ENSOCUG00000022463	VARS	100	92.654	Oryctolagus_cuniculus
ENSEASG00005015673	VARS	100	64.954	ENSORLG00000013063	vars	100	64.973	Oryzias_latipes
ENSEASG00005015673	VARS	100	65.227	ENSORLG00020003504	vars	100	65.305	Oryzias_latipes_hni
ENSEASG00005015673	VARS	100	65.402	ENSORLG00015009001	vars	100	65.402	Oryzias_latipes_hsok
ENSEASG00005015673	VARS	100	65.201	ENSOMEG00000015016	vars	100	65.201	Oryzias_melastigma
ENSEASG00005015673	VARS	100	94.858	ENSOGAG00000007515	VARS	100	94.858	Otolemur_garnettii
ENSEASG00005015673	VARS	100	96.044	ENSPPAG00000034012	VARS	100	96.044	Pan_paniscus
ENSEASG00005015673	VARS	100	96.835	ENSPPRG00000014855	VARS	100	96.835	Panthera_pardus
ENSEASG00005015673	VARS	86	96.978	ENSPTIG00000010462	VARS	95	96.978	Panthera_tigris_altaica
ENSEASG00005015673	VARS	100	95.965	ENSPTRG00000017985	VARS	100	95.965	Pan_troglodytes
ENSEASG00005015673	VARS	100	94.085	ENSPANG00000014565	VARS	100	94.085	Papio_anubis
ENSEASG00005015673	VARS	100	63.369	ENSPKIG00000016304	vars	100	63.784	Paramormyrops_kingsleyae
ENSEASG00005015673	VARS	100	65.852	ENSPMGG00000023909	vars	100	65.694	Periophthalmus_magnuspinnatus
ENSEASG00005015673	VARS	100	94.541	ENSPEMG00000006639	Vars	100	94.541	Peromyscus_maniculatus_bairdii
ENSEASG00005015673	VARS	100	86.551	ENSPCIG00000018553	VARS	100	86.551	Phascolarctos_cinereus
ENSEASG00005015673	VARS	100	66.148	ENSPFOG00000015690	vars	100	66.148	Poecilia_formosa
ENSEASG00005015673	VARS	100	66.798	ENSPLAG00000009590	vars	100	66.483	Poecilia_latipinna
ENSEASG00005015673	VARS	100	66.148	ENSPMEG00000004708	vars	100	66.148	Poecilia_mexicana
ENSEASG00005015673	VARS	100	64.544	ENSPREG00000013264	vars	100	64.235	Poecilia_reticulata
ENSEASG00005015673	VARS	100	94.225	ENSPPYG00000016460	VARS	100	94.225	Pongo_abelii
ENSEASG00005015673	VARS	86	92.998	ENSPCAG00000013565	VARS	86	92.998	Procavia_capensis
ENSEASG00005015673	VARS	100	95.178	ENSPCOG00000010942	VARS	100	95.652	Propithecus_coquereli
ENSEASG00005015673	VARS	100	92.880	ENSPVAG00000012403	VARS	100	92.880	Pteropus_vampyrus
ENSEASG00005015673	VARS	100	65.426	ENSPNYG00000022511	vars	100	65.190	Pundamilia_nyererei
ENSEASG00005015673	VARS	100	65.170	ENSPNAG00000020962	vars	100	65.015	Pygocentrus_nattereri
ENSEASG00005015673	VARS	100	94.304	ENSRNOG00000000867	Vars	100	94.304	Rattus_norvegicus
ENSEASG00005015673	VARS	100	95.807	ENSRBIG00000041669	VARS	100	95.807	Rhinopithecus_bieti
ENSEASG00005015673	VARS	100	95.807	ENSRROG00000045490	VARS	100	95.807	Rhinopithecus_roxellana
ENSEASG00005015673	VARS	100	95.886	ENSSBOG00000035402	VARS	100	95.886	Saimiri_boliviensis_boliviensis
ENSEASG00005015673	VARS	100	82.011	ENSSHAG00000006937	VARS	100	82.247	Sarcophilus_harrisii
ENSEASG00005015673	VARS	100	64.865	ENSSFOG00015014272	vars	100	64.710	Scleropages_formosus
ENSEASG00005015673	VARS	100	64.009	ENSSMAG00000009596	vars	99	63.770	Scophthalmus_maximus
ENSEASG00005015673	VARS	100	65.093	ENSSDUG00000014177	vars	100	64.856	Seriola_dumerili
ENSEASG00005015673	VARS	100	64.938	ENSSLDG00000025316	vars	100	64.701	Seriola_lalandi_dorsalis
ENSEASG00005015673	VARS	100	65.272	ENSSPAG00000017068	vars	100	65.109	Stegastes_partitus
ENSEASG00005015673	VARS	100	94.466	ENSSSCG00000038950	VARS	100	94.941	Sus_scrofa
ENSEASG00005015673	VARS	82	64.430	ENSTRUG00000012307	vars	98	64.374	Takifugu_rubripes
ENSEASG00005015673	VARS	100	65.364	ENSTNIG00000008011	vars	100	65.204	Tetraodon_nigroviridis
ENSEASG00005015673	VARS	54	98.127	ENSTBEG00000004728	-	60	98.127	Tupaia_belangeri
ENSEASG00005015673	VARS	100	87.658	ENSTTRG00000014128	VARS	100	87.658	Tursiops_truncatus
ENSEASG00005015673	VARS	100	92.531	ENSUAMG00000010424	VARS	100	92.531	Ursus_americanus
ENSEASG00005015673	VARS	93	96.667	ENSUMAG00000013486	VARS	98	96.667	Ursus_maritimus
ENSEASG00005015673	VARS	100	95.178	ENSVVUG00000021323	VARS	100	94.941	Vulpes_vulpes
ENSEASG00005015673	VARS	96	63.298	ENSXETG00000024076	vars	98	62.460	Xenopus_tropicalis
ENSEASG00005015673	VARS	100	65.906	ENSXCOG00000019172	vars	100	65.906	Xiphophorus_couchianus
ENSEASG00005015673	VARS	100	66.070	ENSXMAG00000010927	vars	100	66.070	Xiphophorus_maculatus