EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005015918 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 36140 bases
Position: chrPSZQ01000769.1:8923492-8959631
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005023382	TRM13	PF05206.14	1e-92	1	1
ENSEASP00005023383	TRM13	PF05206.14	1e-92	1	1
ENSEASP00005023382	zf-U11-48K	PF05253.12	3.3e-09	1	1
ENSEASP00005023383	zf-U11-48K	PF05253.12	3.3e-09	1	1
ENSEASP00005023382	zf-TRM13_CCCH	PF11722.8	5.9e-13	1	1
ENSEASP00005023383	zf-TRM13_CCCH	PF11722.8	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005025378	TRMT13-202	3163	-	ENSEASP00005023383	481 (aa)	-	-
ENSEAST00005025376	TRMT13-201	1446	-	ENSEASP00005023382	481 (aa)	-	-

Gene Model

Click here to download ENSEASG00005015918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005015918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005015918	TRMT13	100	92.723	ENSG00000122435	TRMT13	100	92.723	Homo_sapiens
ENSEASG00005015918	TRMT13	95	48.185	ENSAPOG00000015131	trmt13	99	48.387	Acanthochromis_polyacanthus
ENSEASG00005015918	TRMT13	100	92.931	ENSAMEG00000008917	TRMT13	100	92.931	Ailuropoda_melanoleuca
ENSEASG00005015918	TRMT13	95	51.380	ENSACIG00000005804	trmt13	97	49.792	Amphilophus_citrinellus
ENSEASG00005015918	TRMT13	95	48.703	ENSAOCG00000023585	trmt13	99	48.703	Amphiprion_ocellaris
ENSEASG00005015918	TRMT13	95	48.703	ENSAPEG00000004025	trmt13	99	48.703	Amphiprion_percula
ENSEASG00005015918	TRMT13	99	51.434	ENSATEG00000006597	trmt13	99	51.434	Anabas_testudineus
ENSEASG00005015918	TRMT13	89	68.677	ENSAPLG00000014924	TRMT13	99	68.677	Anas_platyrhynchos
ENSEASG00005015918	TRMT13	96	64.301	ENSACAG00000003498	TRMT13	98	64.301	Anolis_carolinensis
ENSEASG00005015918	TRMT13	100	92.516	ENSANAG00000019525	TRMT13	100	95.413	Aotus_nancymaae
ENSEASG00005015918	TRMT13	96	53.390	ENSACLG00000020018	trmt13	99	53.390	Astatotilapia_calliptera
ENSEASG00005015918	TRMT13	95	53.961	ENSAMXG00000017963	trmt13	97	54.043	Astyanax_mexicanus
ENSEASG00005015918	TRMT13	100	92.516	ENSBTAG00000015781	TRMT13	100	92.516	Bos_taurus
ENSEASG00005015918	TRMT13	100	90.852	ENSCJAG00000000200	TRMT13	99	95.413	Callithrix_jacchus
ENSEASG00005015918	TRMT13	65	93.631	ENSCAFG00000020021	TRMT13	99	93.631	Canis_familiaris
ENSEASG00005015918	TRMT13	57	95.604	ENSCAFG00020011572	TRMT13	95	94.909	Canis_lupus_dingo
ENSEASG00005015918	TRMT13	100	92.723	ENSCHIG00000015395	TRMT13	100	92.723	Capra_hircus
ENSEASG00005015918	TRMT13	98	81.184	ENSTSYG00000010811	TRMT13	98	89.899	Carlito_syrichta
ENSEASG00005015918	TRMT13	75	69.697	ENSCAPG00000009085	TRMT13	100	70.248	Cavia_aperea
ENSEASG00005015918	TRMT13	100	90.229	ENSCPOG00000000694	TRMT13	100	90.229	Cavia_porcellus
ENSEASG00005015918	TRMT13	100	92.516	ENSCCAG00000023772	TRMT13	100	94.495	Cebus_capucinus
ENSEASG00005015918	TRMT13	100	92.308	ENSCATG00000033556	TRMT13	100	94.495	Cercocebus_atys
ENSEASG00005015918	TRMT13	89	84.543	ENSCLAG00000008220	TRMT13	100	85.246	Chinchilla_lanigera
ENSEASG00005015918	TRMT13	100	92.931	ENSCSAG00000001506	TRMT13	100	92.931	Chlorocebus_sabaeus
ENSEASG00005015918	TRMT13	100	70.062	ENSCPBG00000026671	TRMT13	100	70.062	Chrysemys_picta_bellii
ENSEASG00005015918	TRMT13	100	93.139	ENSCANG00000034659	TRMT13	100	95.413	Colobus_angolensis_palliatus
ENSEASG00005015918	TRMT13	99	86.071	ENSCGRG00001021601	Trmt13	99	86.071	Cricetulus_griseus_chok1gshd
ENSEASG00005015918	TRMT13	53	82.490	ENSCGRG00000000093	-	99	82.490	Cricetulus_griseus_crigri
ENSEASG00005015918	TRMT13	95	48.696	ENSCSEG00000000591	trmt13	97	48.578	Cynoglossus_semilaevis
ENSEASG00005015918	TRMT13	95	49.156	ENSCVAG00000017342	trmt13	93	50.422	Cyprinodon_variegatus
ENSEASG00005015918	TRMT13	95	56.371	ENSDARG00000102846	trmt13	96	56.371	Danio_rerio
ENSEASG00005015918	TRMT13	57	91.304	ENSDNOG00000001710	TRMT13	84	91.304	Dasypus_novemcinctus
ENSEASG00005015918	TRMT13	100	87.526	ENSDORG00000015808	Trmt13	99	87.526	Dipodomys_ordii
ENSEASG00005015918	TRMT13	97	31.677	FBgn0037435	CG18048	96	31.677	Drosophila_melanogaster
ENSEASG00005015918	TRMT13	99	77.035	ENSETEG00000005819	TRMT13	99	77.035	Echinops_telfairi
ENSEASG00005015918	TRMT13	95	44.924	ENSEBUG00000014444	trmt13	96	44.924	Eptatretus_burgeri
ENSEASG00005015918	TRMT13	100	99.584	ENSECAG00000022626	TRMT13	100	99.584	Equus_caballus
ENSEASG00005015918	TRMT13	79	82.595	ENSEEUG00000000294	TRMT13	80	82.595	Erinaceus_europaeus
ENSEASG00005015918	TRMT13	98	55.485	ENSELUG00000003803	trmt13	99	55.789	Esox_lucius
ENSEASG00005015918	TRMT13	100	93.971	ENSFCAG00000030618	TRMT13	100	96.330	Felis_catus
ENSEASG00005015918	TRMT13	99	66.318	ENSFALG00000002424	TRMT13	99	66.318	Ficedula_albicollis
ENSEASG00005015918	TRMT13	99	90.947	ENSFDAG00000006342	TRMT13	98	90.947	Fukomys_damarensis
ENSEASG00005015918	TRMT13	78	51.282	ENSFHEG00000022954	trmt13	97	51.122	Fundulus_heteroclitus
ENSEASG00005015918	TRMT13	95	48.352	ENSGMOG00000013223	trmt13	100	48.791	Gadus_morhua
ENSEASG00005015918	TRMT13	96	65.890	ENSGALG00000005290	TRMT13	98	65.966	Gallus_gallus
ENSEASG00005015918	TRMT13	75	50.667	ENSGAFG00000001577	trmt13	81	50.667	Gambusia_affinis
ENSEASG00005015918	TRMT13	95	51.068	ENSGACG00000013428	trmt13	97	51.709	Gasterosteus_aculeatus
ENSEASG00005015918	TRMT13	100	70.747	ENSGAGG00000023303	TRMT13	99	74.909	Gopherus_agassizii
ENSEASG00005015918	TRMT13	100	92.516	ENSGGOG00000005616	TRMT13	100	92.516	Gorilla_gorilla
ENSEASG00005015918	TRMT13	96	53.814	ENSHBUG00000007754	trmt13	99	53.814	Haplochromis_burtoni
ENSEASG00005015918	TRMT13	99	91.789	ENSHGLG00000002164	TRMT13	98	91.789	Heterocephalus_glaber_female
ENSEASG00005015918	TRMT13	99	91.789	ENSHGLG00100001618	TRMT13	98	91.789	Heterocephalus_glaber_male
ENSEASG00005015918	TRMT13	96	47.639	ENSHCOG00000020553	trmt13	98	47.639	Hippocampus_comes
ENSEASG00005015918	TRMT13	95	56.304	ENSIPUG00000024787	trmt13	97	56.897	Ictalurus_punctatus
ENSEASG00005015918	TRMT13	100	93.971	ENSSTOG00000013483	TRMT13	100	93.971	Ictidomys_tridecemlineatus
ENSEASG00005015918	TRMT13	100	88.358	ENSJJAG00000018012	Trmt13	100	88.358	Jaculus_jaculus
ENSEASG00005015918	TRMT13	64	48.710	ENSKMAG00000007639	trmt13	93	48.710	Kryptolebias_marmoratus
ENSEASG00005015918	TRMT13	96	50.209	ENSLBEG00000020238	trmt13	99	50.522	Labrus_bergylta
ENSEASG00005015918	TRMT13	98	60.981	ENSLACG00000013153	TRMT13	100	60.250	Latimeria_chalumnae
ENSEASG00005015918	TRMT13	95	57.860	ENSLOCG00000000418	trmt13	97	58.297	Lepisosteus_oculatus
ENSEASG00005015918	TRMT13	77	89.189	ENSLAFG00000002383	TRMT13	100	89.189	Loxodonta_africana
ENSEASG00005015918	TRMT13	100	92.723	ENSMFAG00000034681	TRMT13	100	95.413	Macaca_fascicularis
ENSEASG00005015918	TRMT13	100	92.723	ENSMMUG00000004243	TRMT13	100	95.413	Macaca_mulatta
ENSEASG00005015918	TRMT13	100	92.723	ENSMNEG00000036102	TRMT13	100	95.413	Macaca_nemestrina
ENSEASG00005015918	TRMT13	100	92.308	ENSMLEG00000034258	TRMT13	100	94.495	Mandrillus_leucophaeus
ENSEASG00005015918	TRMT13	96	50.633	ENSMAMG00000016597	trmt13	98	50.633	Mastacembelus_armatus
ENSEASG00005015918	TRMT13	96	53.178	ENSMZEG00005020959	trmt13	99	53.178	Maylandia_zebra
ENSEASG00005015918	TRMT13	89	67.681	ENSMGAG00000006970	TRMT13	100	67.681	Meleagris_gallopavo
ENSEASG00005015918	TRMT13	99	85.417	ENSMAUG00000010448	Trmt13	99	85.417	Mesocricetus_auratus
ENSEASG00005015918	TRMT13	100	93.555	ENSMICG00000005283	TRMT13	100	94.495	Microcebus_murinus
ENSEASG00005015918	TRMT13	99	83.333	ENSMOCG00000019914	Trmt13	99	83.333	Microtus_ochrogaster
ENSEASG00005015918	TRMT13	54	50.566	ENSMMOG00000007762	trmt13	89	50.566	Mola_mola
ENSEASG00005015918	TRMT13	100	77.113	ENSMODG00000003646	TRMT13	100	77.113	Monodelphis_domestica
ENSEASG00005015918	TRMT13	99	49.272	ENSMALG00000020965	trmt13	99	49.272	Monopterus_albus
ENSEASG00005015918	TRMT13	99	86.820	MGP_CAROLIEiJ_G0025568	Trmt13	94	92.857	Mus_caroli
ENSEASG00005015918	TRMT13	99	86.402	ENSMUSG00000033439	Trmt13	94	92.857	Mus_musculus
ENSEASG00005015918	TRMT13	99	87.238	MGP_PahariEiJ_G0027014	Trmt13	93	93.373	Mus_pahari
ENSEASG00005015918	TRMT13	99	86.820	MGP_SPRETEiJ_G0026518	Trmt13	94	92.857	Mus_spretus
ENSEASG00005015918	TRMT13	79	90.551	ENSMPUG00000002078	-	100	90.551	Mustela_putorius_furo
ENSEASG00005015918	TRMT13	100	82.328	ENSMLUG00000002124	TRMT13	100	82.328	Myotis_lucifugus
ENSEASG00005015918	TRMT13	99	47.629	ENSNBRG00000006783	trmt13	97	50.427	Neolamprologus_brichardi
ENSEASG00005015918	TRMT13	100	92.308	ENSNLEG00000035917	TRMT13	100	93.578	Nomascus_leucogenys
ENSEASG00005015918	TRMT13	51	75.000	ENSMEUG00000013346	-	100	75.000	Notamacropus_eugenii
ENSEASG00005015918	TRMT13	67	91.544	ENSOPRG00000012048	TRMT13	67	91.544	Ochotona_princeps
ENSEASG00005015918	TRMT13	96	53.814	ENSONIG00000004574	trmt13	99	53.814	Oreochromis_niloticus
ENSEASG00005015918	TRMT13	89	73.550	ENSOANG00000012057	TRMT13	99	73.550	Ornithorhynchus_anatinus
ENSEASG00005015918	TRMT13	100	91.684	ENSOCUG00000023095	TRMT13	100	91.684	Oryctolagus_cuniculus
ENSEASG00005015918	TRMT13	96	47.872	ENSORLG00000003320	trmt13	98	48.511	Oryzias_latipes
ENSEASG00005015918	TRMT13	95	48.408	ENSORLG00020005972	trmt13	97	48.441	Oryzias_latipes_hni
ENSEASG00005015918	TRMT13	96	51.915	ENSORLG00015002270	trmt13	98	51.915	Oryzias_latipes_hsok
ENSEASG00005015918	TRMT13	96	51.688	ENSOMEG00000006724	trmt13	94	52.026	Oryzias_melastigma
ENSEASG00005015918	TRMT13	98	93.235	ENSOGAG00000005618	TRMT13	97	92.516	Otolemur_garnettii
ENSEASG00005015918	TRMT13	100	92.723	ENSOARG00000017983	TRMT13	100	92.723	Ovis_aries
ENSEASG00005015918	TRMT13	100	92.100	ENSPPAG00000043736	TRMT13	100	92.661	Pan_paniscus
ENSEASG00005015918	TRMT13	100	94.387	ENSPPRG00000003424	TRMT13	100	96.330	Panthera_pardus
ENSEASG00005015918	TRMT13	100	94.387	ENSPTIG00000018598	TRMT13	100	96.330	Panthera_tigris_altaica
ENSEASG00005015918	TRMT13	100	92.100	ENSPTRG00000001001	TRMT13	100	92.661	Pan_troglodytes
ENSEASG00005015918	TRMT13	100	92.931	ENSPANG00000007598	TRMT13	100	95.413	Papio_anubis
ENSEASG00005015918	TRMT13	95	55.870	ENSPKIG00000001514	trmt13	97	55.870	Paramormyrops_kingsleyae
ENSEASG00005015918	TRMT13	86	70.743	ENSPSIG00000012703	TRMT13	99	70.743	Pelodiscus_sinensis
ENSEASG00005015918	TRMT13	95	51.844	ENSPMGG00000013298	trmt13	93	51.844	Periophthalmus_magnuspinnatus
ENSEASG00005015918	TRMT13	99	83.958	ENSPEMG00000000275	Trmt13	99	83.958	Peromyscus_maniculatus_bairdii
ENSEASG00005015918	TRMT13	95	45.979	ENSPMAG00000000823	trmt13	97	45.979	Petromyzon_marinus
ENSEASG00005015918	TRMT13	99	77.131	ENSPCIG00000007699	TRMT13	99	77.755	Phascolarctos_cinereus
ENSEASG00005015918	TRMT13	99	48.643	ENSPFOG00000008675	trmt13	99	48.643	Poecilia_formosa
ENSEASG00005015918	TRMT13	95	48.723	ENSPLAG00000009709	trmt13	99	48.723	Poecilia_latipinna
ENSEASG00005015918	TRMT13	95	47.761	ENSPMEG00000022954	trmt13	99	47.761	Poecilia_mexicana
ENSEASG00005015918	TRMT13	78	50.260	ENSPREG00000005645	trmt13	91	49.640	Poecilia_reticulata
ENSEASG00005015918	TRMT13	100	92.100	ENSPPYG00000001120	TRMT13	100	92.100	Pongo_abelii
ENSEASG00005015918	TRMT13	100	89.813	ENSPCAG00000002340	TRMT13	100	89.813	Procavia_capensis
ENSEASG00005015918	TRMT13	100	93.347	ENSPCOG00000017984	TRMT13	100	95.413	Propithecus_coquereli
ENSEASG00005015918	TRMT13	100	95.010	ENSPVAG00000017430	TRMT13	100	95.010	Pteropus_vampyrus
ENSEASG00005015918	TRMT13	96	51.695	ENSPNYG00000013690	trmt13	99	51.695	Pundamilia_nyererei
ENSEASG00005015918	TRMT13	95	54.783	ENSPNAG00000022130	trmt13	97	54.783	Pygocentrus_nattereri
ENSEASG00005015918	TRMT13	99	86.820	ENSRNOG00000015140	Trmt13	96	86.820	Rattus_norvegicus
ENSEASG00005015918	TRMT13	100	93.139	ENSRBIG00000037686	TRMT13	100	95.413	Rhinopithecus_bieti
ENSEASG00005015918	TRMT13	100	93.139	ENSRROG00000044057	TRMT13	100	95.413	Rhinopithecus_roxellana
ENSEASG00005015918	TRMT13	100	92.100	ENSSBOG00000026541	TRMT13	100	95.413	Saimiri_boliviensis_boliviensis
ENSEASG00005015918	TRMT13	91	78.719	ENSSHAG00000005213	TRMT13	97	78.719	Sarcophilus_harrisii
ENSEASG00005015918	TRMT13	95	55.000	ENSSFOG00015017560	trmt13	97	54.783	Scleropages_formosus
ENSEASG00005015918	TRMT13	95	51.592	ENSSMAG00000014592	trmt13	95	51.592	Scophthalmus_maximus
ENSEASG00005015918	TRMT13	95	50.633	ENSSDUG00000015508	trmt13	96	50.628	Seriola_dumerili
ENSEASG00005015918	TRMT13	95	50.844	ENSSLDG00000019060	trmt13	95	50.844	Seriola_lalandi_dorsalis
ENSEASG00005015918	TRMT13	99	78.452	ENSSARG00000010344	TRMT13	99	78.452	Sorex_araneus
ENSEASG00005015918	TRMT13	96	69.114	ENSSPUG00000016339	TRMT13	100	69.114	Sphenodon_punctatus
ENSEASG00005015918	TRMT13	98	51.767	ENSSPAG00000011922	trmt13	99	51.753	Stegastes_partitus
ENSEASG00005015918	TRMT13	100	93.763	ENSSSCG00000006869	TRMT13	100	93.763	Sus_scrofa
ENSEASG00005015918	TRMT13	97	67.094	ENSTGUG00000005253	TRMT13	100	67.094	Taeniopygia_guttata
ENSEASG00005015918	TRMT13	95	50.000	ENSTRUG00000008400	trmt13	99	49.789	Takifugu_rubripes
ENSEASG00005015918	TRMT13	86	75.240	ENSTBEG00000008911	TRMT13	100	75.240	Tupaia_belangeri
ENSEASG00005015918	TRMT13	51	100.000	ENSTTRG00000015302	-	60	100.000	Tursiops_truncatus
ENSEASG00005015918	TRMT13	100	87.110	ENSUAMG00000017251	TRMT13	100	87.110	Ursus_americanus
ENSEASG00005015918	TRMT13	100	92.723	ENSUMAG00000007901	TRMT13	100	92.723	Ursus_maritimus
ENSEASG00005015918	TRMT13	90	75.694	ENSVPAG00000001034	TRMT13	100	75.694	Vicugna_pacos
ENSEASG00005015918	TRMT13	99	93.555	ENSVVUG00000021996	TRMT13	99	93.555	Vulpes_vulpes
ENSEASG00005015918	TRMT13	98	56.263	ENSXETG00000013204	trmt13	99	56.263	Xenopus_tropicalis
ENSEASG00005015918	TRMT13	95	47.881	ENSXMAG00000010765	trmt13	99	47.881	Xiphophorus_maculatus