EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005015926 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 20818 bases
Position: chrPSZQ01000769.1:9041136-9061953
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005023395	RTC	PF01137.21	8.3e-88	1	1
ENSEASP00005023395	RTC_insert	PF05189.13	4.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005025390	RTCA-201	1279	-	ENSEASP00005023395	366 (aa)	-	UPI00071A4214

Gene Model

Click here to download ENSEASG00005015926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005015926's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005015926	RTCA	100	94.536	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSEASG00005015926	RTCA	99	72.022	ENSAPOG00000001345	rtca	98	72.022	Acanthochromis_polyacanthus
ENSEASG00005015926	RTCA	73	96.654	ENSAMEG00000008855	RTCA	100	96.654	Ailuropoda_melanoleuca
ENSEASG00005015926	RTCA	99	71.745	ENSACIG00000019643	rtca	99	71.745	Amphilophus_citrinellus
ENSEASG00005015926	RTCA	100	71.311	ENSAOCG00000014979	rtca	99	71.311	Amphiprion_ocellaris
ENSEASG00005015926	RTCA	100	71.311	ENSAPEG00000006945	rtca	99	71.311	Amphiprion_percula
ENSEASG00005015926	RTCA	100	69.945	ENSATEG00000006315	rtca	100	69.945	Anabas_testudineus
ENSEASG00005015926	RTCA	96	80.791	ENSAPLG00000015430	RTCA	100	80.791	Anas_platyrhynchos
ENSEASG00005015926	RTCA	100	93.989	ENSANAG00000025446	RTCA	100	93.989	Aotus_nancymaae
ENSEASG00005015926	RTCA	100	70.492	ENSACLG00000020770	rtca	99	70.492	Astatotilapia_calliptera
ENSEASG00005015926	RTCA	100	72.951	ENSAMXG00000043271	rtca	100	72.951	Astyanax_mexicanus
ENSEASG00005015926	RTCA	100	96.448	ENSBTAG00000006321	RTCA	100	96.448	Bos_taurus
ENSEASG00005015926	RTCA	100	94.262	ENSCJAG00000003398	RTCA	100	94.262	Callithrix_jacchus
ENSEASG00005015926	RTCA	100	96.721	ENSCAFG00000020010	RTCA	68	96.721	Canis_familiaris
ENSEASG00005015926	RTCA	100	96.721	ENSCAFG00020011528	RTCA	57	96.721	Canis_lupus_dingo
ENSEASG00005015926	RTCA	100	96.721	ENSCHIG00000018937	RTCA	100	96.721	Capra_hircus
ENSEASG00005015926	RTCA	100	93.169	ENSTSYG00000011305	RTCA	100	93.169	Carlito_syrichta
ENSEASG00005015926	RTCA	100	93.989	ENSCCAG00000021844	RTCA	100	93.989	Cebus_capucinus
ENSEASG00005015926	RTCA	100	91.557	ENSCATG00000019364	RTCA	100	94.498	Cercocebus_atys
ENSEASG00005015926	RTCA	87	94.322	ENSCLAG00000006125	RTCA	100	94.322	Chinchilla_lanigera
ENSEASG00005015926	RTCA	100	94.809	ENSCSAG00000001509	RTCA	100	94.809	Chlorocebus_sabaeus
ENSEASG00005015926	RTCA	100	94.809	ENSCHOG00000005211	RTCA	100	94.809	Choloepus_hoffmanni
ENSEASG00005015926	RTCA	100	84.153	ENSCPBG00000026658	RTCA	100	84.153	Chrysemys_picta_bellii
ENSEASG00005015926	RTCA	98	55.556	ENSCING00000007875	-	98	55.556	Ciona_intestinalis
ENSEASG00005015926	RTCA	98	54.444	ENSCSAVG00000007269	-	98	54.444	Ciona_savignyi
ENSEASG00005015926	RTCA	100	94.536	ENSCANG00000040106	RTCA	100	94.536	Colobus_angolensis_palliatus
ENSEASG00005015926	RTCA	73	92.565	ENSCGRG00001013163	Rtca	85	92.565	Cricetulus_griseus_chok1gshd
ENSEASG00005015926	RTCA	99	69.589	ENSCSEG00000000530	rtca	98	69.589	Cynoglossus_semilaevis
ENSEASG00005015926	RTCA	100	60.109	ENSCVAG00000021809	rtca	100	60.109	Cyprinodon_variegatus
ENSEASG00005015926	RTCA	100	72.951	ENSDARG00000002215	rtca	100	72.951	Danio_rerio
ENSEASG00005015926	RTCA	100	94.809	ENSDNOG00000000456	RTCA	100	94.809	Dasypus_novemcinctus
ENSEASG00005015926	RTCA	100	92.896	ENSDORG00000005448	Rtca	100	92.896	Dipodomys_ordii
ENSEASG00005015926	RTCA	98	38.827	FBgn0025630	Rtca	98	38.827	Drosophila_melanogaster
ENSEASG00005015926	RTCA	95	55.085	ENSEBUG00000008556	rtca	97	55.085	Eptatretus_burgeri
ENSEASG00005015926	RTCA	100	100.000	ENSECAG00000019831	RTCA	100	100.000	Equus_caballus
ENSEASG00005015926	RTCA	91	84.393	ENSEEUG00000001165	RTCA	100	84.393	Erinaceus_europaeus
ENSEASG00005015926	RTCA	99	71.745	ENSELUG00000003741	rtca	99	71.745	Esox_lucius
ENSEASG00005015926	RTCA	100	96.175	ENSFCAG00000024460	RTCA	100	96.175	Felis_catus
ENSEASG00005015926	RTCA	93	82.059	ENSFALG00000002443	RTCA	91	82.059	Ficedula_albicollis
ENSEASG00005015926	RTCA	98	72.376	ENSFDAG00000016084	-	100	72.376	Fukomys_damarensis
ENSEASG00005015926	RTCA	100	94.809	ENSFDAG00000012070	-	100	94.809	Fukomys_damarensis
ENSEASG00005015926	RTCA	55	74.000	ENSFHEG00000002868	rtca	96	68.584	Fundulus_heteroclitus
ENSEASG00005015926	RTCA	100	68.852	ENSGMOG00000013264	rtca	100	68.852	Gadus_morhua
ENSEASG00005015926	RTCA	100	83.333	ENSGALG00000005277	RTCA	100	83.333	Gallus_gallus
ENSEASG00005015926	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSEASG00005015926	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSEASG00005015926	RTCA	80	84.642	ENSGAGG00000023306	RTCA	100	84.642	Gopherus_agassizii
ENSEASG00005015926	RTCA	100	94.536	ENSGGOG00000009546	-	100	94.536	Gorilla_gorilla
ENSEASG00005015926	RTCA	100	93.716	ENSGGOG00000044018	-	100	93.716	Gorilla_gorilla
ENSEASG00005015926	RTCA	100	70.219	ENSHBUG00000002114	rtca	99	70.219	Haplochromis_burtoni
ENSEASG00005015926	RTCA	100	93.716	ENSHGLG00000002617	RTCA	100	93.716	Heterocephalus_glaber_female
ENSEASG00005015926	RTCA	100	93.716	ENSHGLG00100006056	RTCA	100	93.716	Heterocephalus_glaber_male
ENSEASG00005015926	RTCA	100	63.934	ENSHCOG00000020628	rtca	89	63.934	Hippocampus_comes
ENSEASG00005015926	RTCA	100	73.224	ENSIPUG00000024803	rtca	100	73.224	Ictalurus_punctatus
ENSEASG00005015926	RTCA	100	87.705	ENSSTOG00000013528	-	100	87.705	Ictidomys_tridecemlineatus
ENSEASG00005015926	RTCA	100	83.651	ENSSTOG00000033099	-	100	83.651	Ictidomys_tridecemlineatus
ENSEASG00005015926	RTCA	100	66.393	ENSJJAG00000016178	Rtca	100	66.393	Jaculus_jaculus
ENSEASG00005015926	RTCA	99	72.299	ENSKMAG00000006651	rtca	98	72.299	Kryptolebias_marmoratus
ENSEASG00005015926	RTCA	99	69.529	ENSLBEG00000028971	rtca	99	69.529	Labrus_bergylta
ENSEASG00005015926	RTCA	88	69.159	ENSLBEG00000002448	-	99	69.159	Labrus_bergylta
ENSEASG00005015926	RTCA	100	78.142	ENSLACG00000013666	RTCA	100	78.142	Latimeria_chalumnae
ENSEASG00005015926	RTCA	100	73.770	ENSLOCG00000000093	rtca	99	73.770	Lepisosteus_oculatus
ENSEASG00005015926	RTCA	100	93.716	ENSLAFG00000001473	RTCA	100	93.716	Loxodonta_africana
ENSEASG00005015926	RTCA	100	94.809	ENSMFAG00000034132	RTCA	100	94.809	Macaca_fascicularis
ENSEASG00005015926	RTCA	100	94.262	ENSMMUG00000019105	RTCA	100	94.262	Macaca_mulatta
ENSEASG00005015926	RTCA	84	94.498	ENSMNEG00000037163	RTCA	100	94.498	Macaca_nemestrina
ENSEASG00005015926	RTCA	100	78.689	ENSMLEG00000042151	RTCA	100	78.689	Mandrillus_leucophaeus
ENSEASG00005015926	RTCA	100	72.951	ENSMAMG00000016536	rtca	100	72.951	Mastacembelus_armatus
ENSEASG00005015926	RTCA	100	70.492	ENSMZEG00005017945	rtca	99	70.492	Maylandia_zebra
ENSEASG00005015926	RTCA	87	82.445	ENSMGAG00000006892	RTCA	99	82.445	Meleagris_gallopavo
ENSEASG00005015926	RTCA	100	91.257	ENSMAUG00000008488	Rtca	100	91.257	Mesocricetus_auratus
ENSEASG00005015926	RTCA	84	95.793	ENSMICG00000008643	RTCA	100	95.793	Microcebus_murinus
ENSEASG00005015926	RTCA	100	92.077	ENSMOCG00000016660	Rtca	100	92.077	Microtus_ochrogaster
ENSEASG00005015926	RTCA	84	71.845	ENSMMOG00000007750	rtca	100	71.845	Mola_mola
ENSEASG00005015926	RTCA	100	91.530	ENSMODG00000003557	RTCA	100	91.530	Monodelphis_domestica
ENSEASG00005015926	RTCA	100	72.678	ENSMALG00000020844	rtca	100	72.678	Monopterus_albus
ENSEASG00005015926	RTCA	100	90.710	MGP_CAROLIEiJ_G0025565	Rtca	100	91.549	Mus_caroli
ENSEASG00005015926	RTCA	100	90.164	ENSMUSG00000000339	Rtca	100	91.549	Mus_musculus
ENSEASG00005015926	RTCA	100	90.437	MGP_PahariEiJ_G0027011	Rtca	100	90.845	Mus_pahari
ENSEASG00005015926	RTCA	100	90.437	MGP_SPRETEiJ_G0026515	Rtca	100	90.845	Mus_spretus
ENSEASG00005015926	RTCA	100	96.448	ENSMPUG00000012119	RTCA	100	96.448	Mustela_putorius_furo
ENSEASG00005015926	RTCA	100	88.828	ENSMLUG00000009922	RTCA	100	88.828	Myotis_lucifugus
ENSEASG00005015926	RTCA	100	91.530	ENSNGAG00000011540	Rtca	99	91.530	Nannospalax_galili
ENSEASG00005015926	RTCA	100	70.492	ENSNBRG00000003062	rtca	99	70.492	Neolamprologus_brichardi
ENSEASG00005015926	RTCA	100	94.536	ENSNLEG00000031426	RTCA	100	94.536	Nomascus_leucogenys
ENSEASG00005015926	RTCA	76	72.727	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSEASG00005015926	RTCA	73	88.476	ENSOPRG00000012092	RTCA	71	88.476	Ochotona_princeps
ENSEASG00005015926	RTCA	95	93.966	ENSODEG00000006990	RTCA	96	94.017	Octodon_degus
ENSEASG00005015926	RTCA	100	70.219	ENSONIG00000007753	rtca	99	70.219	Oreochromis_niloticus
ENSEASG00005015926	RTCA	87	88.013	ENSOANG00000012055	RTCA	98	88.013	Ornithorhynchus_anatinus
ENSEASG00005015926	RTCA	100	95.355	ENSOCUG00000014247	RTCA	100	95.355	Oryctolagus_cuniculus
ENSEASG00005015926	RTCA	100	70.765	ENSORLG00000013605	rtca	100	70.765	Oryzias_latipes
ENSEASG00005015926	RTCA	100	70.765	ENSORLG00020001904	rtca	100	70.765	Oryzias_latipes_hni
ENSEASG00005015926	RTCA	100	70.765	ENSORLG00015021064	rtca	100	70.765	Oryzias_latipes_hsok
ENSEASG00005015926	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSEASG00005015926	RTCA	100	84.973	ENSOGAG00000005627	RTCA	100	84.973	Otolemur_garnettii
ENSEASG00005015926	RTCA	87	95.912	ENSOARG00000018122	RTCA	100	95.912	Ovis_aries
ENSEASG00005015926	RTCA	100	91.293	ENSPPAG00000035119	RTCA	100	94.498	Pan_paniscus
ENSEASG00005015926	RTCA	100	95.902	ENSPPRG00000000350	RTCA	100	95.902	Panthera_pardus
ENSEASG00005015926	RTCA	100	95.902	ENSPTIG00000012816	RTCA	100	95.902	Panthera_tigris_altaica
ENSEASG00005015926	RTCA	100	91.293	ENSPTRG00000001004	RTCA	100	94.498	Pan_troglodytes
ENSEASG00005015926	RTCA	100	94.536	ENSPANG00000000346	RTCA	100	94.536	Papio_anubis
ENSEASG00005015926	RTCA	100	74.044	ENSPKIG00000001653	rtca	100	74.044	Paramormyrops_kingsleyae
ENSEASG00005015926	RTCA	100	84.699	ENSPSIG00000011408	RTCA	100	84.699	Pelodiscus_sinensis
ENSEASG00005015926	RTCA	100	91.803	ENSPEMG00000018582	Rtca	100	91.803	Peromyscus_maniculatus_bairdii
ENSEASG00005015926	RTCA	100	58.856	ENSPMAG00000009110	rtca	100	58.856	Petromyzon_marinus
ENSEASG00005015926	RTCA	100	92.623	ENSPCIG00000007684	RTCA	100	92.623	Phascolarctos_cinereus
ENSEASG00005015926	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSEASG00005015926	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSEASG00005015926	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSEASG00005015926	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSEASG00005015926	RTCA	100	94.536	ENSPPYG00000001115	RTCA	100	94.536	Pongo_abelii
ENSEASG00005015926	RTCA	100	90.437	ENSPCAG00000005076	RTCA	100	90.437	Procavia_capensis
ENSEASG00005015926	RTCA	100	95.902	ENSPCOG00000005603	RTCA	100	95.902	Propithecus_coquereli
ENSEASG00005015926	RTCA	100	91.029	ENSPVAG00000009478	RTCA	100	91.029	Pteropus_vampyrus
ENSEASG00005015926	RTCA	100	70.492	ENSPNYG00000004722	rtca	99	70.492	Pundamilia_nyererei
ENSEASG00005015926	RTCA	100	72.951	ENSPNAG00000022270	rtca	100	72.951	Pygocentrus_nattereri
ENSEASG00005015926	RTCA	100	91.257	ENSRNOG00000014575	Rtca	100	91.257	Rattus_norvegicus
ENSEASG00005015926	RTCA	100	90.765	ENSRBIG00000041180	RTCA	100	93.528	Rhinopithecus_bieti
ENSEASG00005015926	RTCA	100	93.989	ENSRROG00000024929	RTCA	100	93.989	Rhinopithecus_roxellana
ENSEASG00005015926	RTCA	100	93.443	ENSSBOG00000028626	RTCA	100	93.443	Saimiri_boliviensis_boliviensis
ENSEASG00005015926	RTCA	100	92.350	ENSSHAG00000001758	RTCA	100	92.350	Sarcophilus_harrisii
ENSEASG00005015926	RTCA	98	69.444	ENSSMAG00000014680	rtca	97	69.444	Scophthalmus_maximus
ENSEASG00005015926	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSEASG00005015926	RTCA	96	72.080	ENSSLDG00000018985	rtca	95	72.080	Seriola_lalandi_dorsalis
ENSEASG00005015926	RTCA	87	86.751	ENSSARG00000013993	RTCA	100	86.751	Sorex_araneus
ENSEASG00005015926	RTCA	100	70.492	ENSSPAG00000011938	rtca	99	70.492	Stegastes_partitus
ENSEASG00005015926	RTCA	100	96.448	ENSSSCG00000006865	RTCA	100	96.448	Sus_scrofa
ENSEASG00005015926	RTCA	100	83.333	ENSTGUG00000005154	RTCA	100	83.333	Taeniopygia_guttata
ENSEASG00005015926	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSEASG00005015926	RTCA	100	71.858	ENSTNIG00000004725	rtca	100	71.858	Tetraodon_nigroviridis
ENSEASG00005015926	RTCA	59	80.909	ENSTBEG00000000943	RTCA	82	66.387	Tupaia_belangeri
ENSEASG00005015926	RTCA	100	91.821	ENSTTRG00000015327	RTCA	100	91.821	Tursiops_truncatus
ENSEASG00005015926	RTCA	94	93.878	ENSUAMG00000017265	RTCA	96	93.878	Ursus_americanus
ENSEASG00005015926	RTCA	100	96.175	ENSUMAG00000007881	RTCA	100	96.175	Ursus_maritimus
ENSEASG00005015926	RTCA	87	85.804	ENSVPAG00000001039	RTCA	84	85.804	Vicugna_pacos
ENSEASG00005015926	RTCA	100	96.448	ENSVVUG00000022041	RTCA	68	96.448	Vulpes_vulpes
ENSEASG00005015926	RTCA	99	65.395	ENSXETG00000031661	RTCA	99	65.395	Xenopus_tropicalis
ENSEASG00005015926	RTCA	100	62.568	ENSXCOG00000008002	rtca	100	62.568	Xiphophorus_couchianus
ENSEASG00005015926	RTCA	100	71.858	ENSXMAG00000005482	rtca	99	71.858	Xiphophorus_maculatus