EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005015951 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 3159 bases
Position: chrPSZQ01000594.1:22740319-22743477
Accession: 604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005023436	APOBEC_N	PF08210.11	7.7e-28	1	1
ENSEASP00005023436	APOBEC_C	PF05240.14	3.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005025432	APOBEC1-201	717	-	ENSEASP00005023436	238 (aa)	-	-

Gene Model

Click here to download ENSEASG00005015951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005015951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005015951	APOBEC1	97	81.818	ENSG00000111701	APOBEC1	98	81.818	Homo_sapiens
ENSEASG00005015951	APOBEC1	99	83.475	ENSAMEG00000007098	APOBEC1	100	83.475	Ailuropoda_melanoleuca
ENSEASG00005015951	APOBEC1	71	41.520	ENSACAG00000028578	-	93	41.520	Anolis_carolinensis
ENSEASG00005015951	APOBEC1	97	81.818	ENSANAG00000027743	APOBEC1	93	81.818	Aotus_nancymaae
ENSEASG00005015951	APOBEC1	97	78.355	ENSBTAG00000014683	APOBEC1	98	78.355	Bos_taurus
ENSEASG00005015951	APOBEC1	93	81.900	ENSCJAG00000005398	APOBEC1	100	81.900	Callithrix_jacchus
ENSEASG00005015951	APOBEC1	98	80.258	ENSCAFG00000013901	APOBEC1	99	80.258	Canis_familiaris
ENSEASG00005015951	APOBEC1	95	80.088	ENSCAFG00020003511	APOBEC1	95	80.088	Canis_lupus_dingo
ENSEASG00005015951	APOBEC1	100	78.151	ENSCHIG00000011898	APOBEC1	99	78.151	Capra_hircus
ENSEASG00005015951	APOBEC1	59	79.433	ENSTSYG00000029141	APOBEC1	100	79.433	Carlito_syrichta
ENSEASG00005015951	APOBEC1	90	71.028	ENSCAPG00000015882	-	99	71.028	Cavia_aperea
ENSEASG00005015951	APOBEC1	97	68.103	ENSCPOG00000033068	APOBEC1	98	68.103	Cavia_porcellus
ENSEASG00005015951	APOBEC1	97	81.385	ENSCCAG00000022258	APOBEC1	98	81.385	Cebus_capucinus
ENSEASG00005015951	APOBEC1	97	83.117	ENSCATG00000021613	APOBEC1	93	83.117	Cercocebus_atys
ENSEASG00005015951	APOBEC1	95	71.681	ENSCLAG00000014645	APOBEC1	98	71.681	Chinchilla_lanigera
ENSEASG00005015951	APOBEC1	80	83.246	ENSCSAG00000009817	APOBEC1	100	83.246	Chlorocebus_sabaeus
ENSEASG00005015951	APOBEC1	90	37.037	ENSCPBG00000014327	-	84	37.674	Chrysemys_picta_bellii
ENSEASG00005015951	APOBEC1	90	42.130	ENSCPBG00000014328	-	94	42.130	Chrysemys_picta_bellii
ENSEASG00005015951	APOBEC1	82	48.469	ENSCPBG00000014329	-	54	48.469	Chrysemys_picta_bellii
ENSEASG00005015951	APOBEC1	97	38.889	ENSCPBG00000014331	-	94	38.889	Chrysemys_picta_bellii
ENSEASG00005015951	APOBEC1	79	50.000	ENSCPBG00000014335	-	77	50.000	Chrysemys_picta_bellii
ENSEASG00005015951	APOBEC1	89	40.708	ENSCPBG00000017398	-	99	40.708	Chrysemys_picta_bellii
ENSEASG00005015951	APOBEC1	97	81.739	ENSCANG00000038359	APOBEC1	100	81.739	Colobus_angolensis_palliatus
ENSEASG00005015951	APOBEC1	96	72.052	ENSCGRG00001011130	Apobec1	100	72.052	Cricetulus_griseus_chok1gshd
ENSEASG00005015951	APOBEC1	96	72.052	ENSCGRG00000008644	Apobec1	100	72.052	Cricetulus_griseus_crigri
ENSEASG00005015951	APOBEC1	97	80.603	ENSDNOG00000010926	APOBEC1	98	80.603	Dasypus_novemcinctus
ENSEASG00005015951	APOBEC1	89	69.159	ENSDORG00000023717	Apobec1	100	69.159	Dipodomys_ordii
ENSEASG00005015951	APOBEC1	96	78.261	ENSETEG00000004867	APOBEC1	97	78.261	Echinops_telfairi
ENSEASG00005015951	APOBEC1	80	100.000	ENSECAG00000017163	APOBEC1	100	100.000	Equus_caballus
ENSEASG00005015951	APOBEC1	90	66.204	ENSEEUG00000009112	-	96	66.204	Erinaceus_europaeus
ENSEASG00005015951	APOBEC1	86	53.922	ENSEEUG00000007530	-	97	53.922	Erinaceus_europaeus
ENSEASG00005015951	APOBEC1	98	84.120	ENSFCAG00000009350	APOBEC1	99	84.120	Felis_catus
ENSEASG00005015951	APOBEC1	59	50.000	ENSFALG00000007257	-	70	50.000	Ficedula_albicollis
ENSEASG00005015951	APOBEC1	87	57.488	ENSFDAG00000018470	APOBEC1	99	57.488	Fukomys_damarensis
ENSEASG00005015951	APOBEC1	89	41.121	ENSGAGG00000021744	-	84	41.121	Gopherus_agassizii
ENSEASG00005015951	APOBEC1	79	39.791	ENSGAGG00000021745	-	69	39.791	Gopherus_agassizii
ENSEASG00005015951	APOBEC1	86	49.029	ENSGAGG00000011837	-	88	51.667	Gopherus_agassizii
ENSEASG00005015951	APOBEC1	67	50.000	ENSGAGG00000004947	-	76	54.918	Gopherus_agassizii
ENSEASG00005015951	APOBEC1	78	44.385	ENSGAGG00000006624	-	68	44.385	Gopherus_agassizii
ENSEASG00005015951	APOBEC1	97	62.500	ENSHGLG00000001495	APOBEC1	98	62.500	Heterocephalus_glaber_female
ENSEASG00005015951	APOBEC1	97	61.638	ENSHGLG00100002187	APOBEC1	98	61.638	Heterocephalus_glaber_male
ENSEASG00005015951	APOBEC1	90	65.116	ENSSTOG00000021971	APOBEC1	100	80.612	Ictidomys_tridecemlineatus
ENSEASG00005015951	APOBEC1	95	75.221	ENSJJAG00000022108	Apobec1	99	75.221	Jaculus_jaculus
ENSEASG00005015951	APOBEC1	94	80.717	ENSLAFG00000030837	APOBEC1	100	80.717	Loxodonta_africana
ENSEASG00005015951	APOBEC1	97	83.550	ENSMFAG00000000277	APOBEC1	100	84.293	Macaca_fascicularis
ENSEASG00005015951	APOBEC1	97	83.117	ENSMNEG00000029670	APOBEC1	98	83.117	Macaca_nemestrina
ENSEASG00005015951	APOBEC1	97	83.117	ENSMLEG00000036301	APOBEC1	98	83.117	Mandrillus_leucophaeus
ENSEASG00005015951	APOBEC1	91	73.611	ENSMAUG00000022167	Apobec1	97	73.611	Mesocricetus_auratus
ENSEASG00005015951	APOBEC1	97	82.251	ENSMICG00000043645	APOBEC1	97	83.333	Microcebus_murinus
ENSEASG00005015951	APOBEC1	97	68.103	ENSMODG00000018004	APOBEC1	98	68.103	Monodelphis_domestica
ENSEASG00005015951	APOBEC1	96	71.053	ENSMUSG00000040613	Apobec1	99	71.053	Mus_musculus
ENSEASG00005015951	APOBEC1	96	70.175	MGP_PahariEiJ_G0022580	-	99	70.175	Mus_pahari
ENSEASG00005015951	APOBEC1	96	71.053	MGP_SPRETEiJ_G0029857	Apobec1	99	71.053	Mus_spretus
ENSEASG00005015951	APOBEC1	98	79.828	ENSMPUG00000017532	APOBEC1	99	79.828	Mustela_putorius_furo
ENSEASG00005015951	APOBEC1	94	74.107	ENSNGAG00000022607	Apobec1	98	74.107	Nannospalax_galili
ENSEASG00005015951	APOBEC1	97	82.684	ENSNLEG00000005342	APOBEC1	98	82.684	Nomascus_leucogenys
ENSEASG00005015951	APOBEC1	97	67.532	ENSMEUG00000013406	APOBEC1	98	67.532	Notamacropus_eugenii
ENSEASG00005015951	APOBEC1	76	61.326	ENSOPRG00000009508	-	100	61.326	Ochotona_princeps
ENSEASG00005015951	APOBEC1	99	73.840	ENSOCUG00000025736	APOBEC1	89	73.840	Oryctolagus_cuniculus
ENSEASG00005015951	APOBEC1	99	79.661	ENSOGAG00000026415	APOBEC1	100	79.661	Otolemur_garnettii
ENSEASG00005015951	APOBEC1	97	78.788	ENSOARG00000002072	APOBEC1	97	78.788	Ovis_aries
ENSEASG00005015951	APOBEC1	99	75.847	ENSPPAG00000027657	APOBEC1	100	75.847	Pan_paniscus
ENSEASG00005015951	APOBEC1	98	84.549	ENSPPRG00000012182	APOBEC1	99	84.549	Panthera_pardus
ENSEASG00005015951	APOBEC1	98	84.549	ENSPTIG00000020280	APOBEC1	99	84.549	Panthera_tigris_altaica
ENSEASG00005015951	APOBEC1	97	82.684	ENSPTRG00000004614	APOBEC1	98	82.684	Pan_troglodytes
ENSEASG00005015951	APOBEC1	97	82.684	ENSPANG00000021027	APOBEC1	98	82.684	Papio_anubis
ENSEASG00005015951	APOBEC1	53	50.459	ENSPSIG00000012791	-	72	50.459	Pelodiscus_sinensis
ENSEASG00005015951	APOBEC1	76	44.505	ENSPSIG00000012568	-	79	44.505	Pelodiscus_sinensis
ENSEASG00005015951	APOBEC1	96	71.616	ENSPEMG00000023841	Apobec1	100	71.616	Peromyscus_maniculatus_bairdii
ENSEASG00005015951	APOBEC1	97	70.996	ENSPCIG00000023973	APOBEC1	98	70.996	Phascolarctos_cinereus
ENSEASG00005015951	APOBEC1	97	80.952	ENSPPYG00000004228	APOBEC1	93	80.952	Pongo_abelii
ENSEASG00005015951	APOBEC1	79	80.749	ENSPCAG00000008733	APOBEC1	100	80.749	Procavia_capensis
ENSEASG00005015951	APOBEC1	93	84.685	ENSPCOG00000013957	APOBEC1	98	84.685	Propithecus_coquereli
ENSEASG00005015951	APOBEC1	97	66.667	ENSPVAG00000010709	APOBEC1	98	66.667	Pteropus_vampyrus
ENSEASG00005015951	APOBEC1	96	70.175	ENSRNOG00000015411	Apobec1	99	70.175	Rattus_norvegicus
ENSEASG00005015951	APOBEC1	97	81.818	ENSRBIG00000031161	APOBEC1	98	81.818	Rhinopithecus_bieti
ENSEASG00005015951	APOBEC1	97	81.818	ENSRROG00000033576	APOBEC1	100	82.199	Rhinopithecus_roxellana
ENSEASG00005015951	APOBEC1	73	82.659	ENSSBOG00000030587	APOBEC1	98	82.659	Saimiri_boliviensis_boliviensis
ENSEASG00005015951	APOBEC1	95	70.044	ENSSHAG00000008925	APOBEC1	99	70.044	Sarcophilus_harrisii
ENSEASG00005015951	APOBEC1	72	67.442	ENSSARG00000000032	-	100	67.442	Sorex_araneus
ENSEASG00005015951	APOBEC1	55	70.992	ENSSARG00000011972	-	99	70.992	Sorex_araneus
ENSEASG00005015951	APOBEC1	92	40.889	ENSSPUG00000009044	-	86	40.889	Sphenodon_punctatus
ENSEASG00005015951	APOBEC1	97	80.952	ENSSSCG00000000668	APOBEC1	98	80.952	Sus_scrofa
ENSEASG00005015951	APOBEC1	60	50.694	ENSTGUG00000013118	-	99	50.694	Taeniopygia_guttata
ENSEASG00005015951	APOBEC1	93	76.471	ENSTBEG00000010043	APOBEC1	94	76.471	Tupaia_belangeri
ENSEASG00005015951	APOBEC1	76	79.121	ENSTTRG00000014015	APOBEC1	97	79.121	Tursiops_truncatus
ENSEASG00005015951	APOBEC1	99	83.051	ENSUAMG00000011636	APOBEC1	97	83.051	Ursus_americanus
ENSEASG00005015951	APOBEC1	99	83.051	ENSUMAG00000016552	APOBEC1	97	83.051	Ursus_maritimus
ENSEASG00005015951	APOBEC1	97	79.654	ENSVPAG00000001343	APOBEC1	98	79.654	Vicugna_pacos
ENSEASG00005015951	APOBEC1	98	81.116	ENSVVUG00000010522	APOBEC1	99	81.116	Vulpes_vulpes