EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005015957 (Gene tree)
Gene ID: -
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 24405 bases
Position: chrPSZQ01000769.1:11644719-11669123
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005023438	RRM_1	PF00076.22	4.2e-17	1	2
ENSEASP00005023438	RRM_1	PF00076.22	4.2e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005025434	RNPC3-201	1554	-	ENSEASP00005023438	517 (aa)	-	UPI00071AA3DE

Gene Model

Click here to download ENSEASG00005015957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005015957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005015957	RNPC3	100	92.471	ENSG00000185946	RNPC3	100	94.203	Homo_sapiens
ENSEASG00005015957	RNPC3	95	57.172	ENSAPOG00000017371	rnpc3	97	57.172	Acanthochromis_polyacanthus
ENSEASG00005015957	RNPC3	98	93.320	ENSAMEG00000001694	RNPC3	100	92.500	Ailuropoda_melanoleuca
ENSEASG00005015957	RNPC3	95	54.000	ENSACIG00000021043	rnpc3	97	53.800	Amphilophus_citrinellus
ENSEASG00005015957	RNPC3	95	56.687	ENSAOCG00000014052	rnpc3	95	56.687	Amphiprion_ocellaris
ENSEASG00005015957	RNPC3	95	56.487	ENSAPEG00000008739	rnpc3	95	56.487	Amphiprion_percula
ENSEASG00005015957	RNPC3	95	55.777	ENSATEG00000021263	rnpc3	97	55.777	Anabas_testudineus
ENSEASG00005015957	RNPC3	87	69.956	ENSAPLG00000015605	RNPC3	99	70.925	Anas_platyrhynchos
ENSEASG00005015957	RNPC3	96	67.540	ENSACAG00000002029	RNPC3	97	68.327	Anolis_carolinensis
ENSEASG00005015957	RNPC3	100	91.699	ENSANAG00000019950	RNPC3	100	91.699	Aotus_nancymaae
ENSEASG00005015957	RNPC3	94	54.970	ENSACLG00000014702	rnpc3	96	54.970	Astatotilapia_calliptera
ENSEASG00005015957	RNPC3	94	58.078	ENSAMXG00000033372	rnpc3	96	58.078	Astyanax_mexicanus
ENSEASG00005015957	RNPC3	100	93.050	ENSBTAG00000019091	RNPC3	100	93.050	Bos_taurus
ENSEASG00005015957	RNPC3	100	87.838	ENSCJAG00000035686	RNPC3	100	88.224	Callithrix_jacchus
ENSEASG00005015957	RNPC3	100	93.629	ENSCAFG00000019972	RNPC3	100	93.629	Canis_familiaris
ENSEASG00005015957	RNPC3	100	93.629	ENSCAFG00020011300	RNPC3	100	93.629	Canis_lupus_dingo
ENSEASG00005015957	RNPC3	100	93.243	ENSCHIG00000020361	RNPC3	100	93.243	Capra_hircus
ENSEASG00005015957	RNPC3	100	91.120	ENSTSYG00000030256	RNPC3	100	91.120	Carlito_syrichta
ENSEASG00005015957	RNPC3	84	78.261	ENSCAPG00000013600	RNPC3	97	77.958	Cavia_aperea
ENSEASG00005015957	RNPC3	100	89.961	ENSCPOG00000031638	RNPC3	100	89.961	Cavia_porcellus
ENSEASG00005015957	RNPC3	100	91.892	ENSCCAG00000024301	RNPC3	100	91.892	Cebus_capucinus
ENSEASG00005015957	RNPC3	99	92.442	ENSCATG00000002086	RNPC3	99	92.442	Cercocebus_atys
ENSEASG00005015957	RNPC3	98	70.611	ENSCATG00000035930	-	99	69.428	Cercocebus_atys
ENSEASG00005015957	RNPC3	100	86.680	ENSCLAG00000005169	RNPC3	100	86.680	Chinchilla_lanigera
ENSEASG00005015957	RNPC3	99	92.248	ENSCSAG00000001519	RNPC3	99	92.248	Chlorocebus_sabaeus
ENSEASG00005015957	RNPC3	97	69.804	ENSCPBG00000028311	RNPC3	99	68.762	Chrysemys_picta_bellii
ENSEASG00005015957	RNPC3	95	37.305	ENSCING00000021276	-	98	38.540	Ciona_intestinalis
ENSEASG00005015957	RNPC3	67	49.693	ENSCSAVG00000002800	-	84	49.693	Ciona_savignyi
ENSEASG00005015957	RNPC3	99	91.860	ENSCANG00000031444	RNPC3	99	91.860	Colobus_angolensis_palliatus
ENSEASG00005015957	RNPC3	99	89.555	ENSCGRG00001019276	Rnpc3	100	89.555	Cricetulus_griseus_chok1gshd
ENSEASG00005015957	RNPC3	87	90.044	ENSCGRG00000000053	Rnpc3	100	90.044	Cricetulus_griseus_crigri
ENSEASG00005015957	RNPC3	94	54.268	ENSCSEG00000013475	rnpc3	96	54.397	Cynoglossus_semilaevis
ENSEASG00005015957	RNPC3	94	55.467	ENSCVAG00000002645	rnpc3	97	55.138	Cyprinodon_variegatus
ENSEASG00005015957	RNPC3	95	55.556	ENSDARG00000011247	rnpc3	91	64.118	Danio_rerio
ENSEASG00005015957	RNPC3	100	91.699	ENSDNOG00000044555	-	100	91.699	Dasypus_novemcinctus
ENSEASG00005015957	RNPC3	100	91.313	ENSDNOG00000047498	-	100	91.313	Dasypus_novemcinctus
ENSEASG00005015957	RNPC3	99	89.942	ENSDORG00000027343	Rnpc3	99	89.942	Dipodomys_ordii
ENSEASG00005015957	RNPC3	94	48.024	ENSEBUG00000002068	rnpc3	97	48.509	Eptatretus_burgeri
ENSEASG00005015957	RNPC3	100	99.226	ENSECAG00000021148	RNPC3	100	99.226	Equus_caballus
ENSEASG00005015957	RNPC3	95	53.876	ENSELUG00000002264	rnpc3	97	51.803	Esox_lucius
ENSEASG00005015957	RNPC3	100	93.436	ENSFCAG00000024312	RNPC3	100	93.436	Felis_catus
ENSEASG00005015957	RNPC3	87	72.687	ENSFALG00000002580	RNPC3	99	73.077	Ficedula_albicollis
ENSEASG00005015957	RNPC3	99	90.522	ENSFDAG00000019948	RNPC3	100	90.522	Fukomys_damarensis
ENSEASG00005015957	RNPC3	95	51.619	ENSFHEG00000020647	rnpc3	98	50.194	Fundulus_heteroclitus
ENSEASG00005015957	RNPC3	94	55.110	ENSGMOG00000019213	rnpc3	95	53.644	Gadus_morhua
ENSEASG00005015957	RNPC3	95	72.727	ENSGALG00000005162	RNPC3	89	72.121	Gallus_gallus
ENSEASG00005015957	RNPC3	94	54.092	ENSGAFG00000017236	rnpc3	96	54.092	Gambusia_affinis
ENSEASG00005015957	RNPC3	94	55.306	ENSGACG00000002048	rnpc3	96	54.600	Gasterosteus_aculeatus
ENSEASG00005015957	RNPC3	95	70.968	ENSGAGG00000008438	RNPC3	98	69.667	Gopherus_agassizii
ENSEASG00005015957	RNPC3	99	74.219	ENSGGOG00000026201	-	99	74.369	Gorilla_gorilla
ENSEASG00005015957	RNPC3	78	81.579	ENSHBUG00000015966	rnpc3	82	81.579	Haplochromis_burtoni
ENSEASG00005015957	RNPC3	100	90.541	ENSHGLG00000001708	RNPC3	100	90.541	Heterocephalus_glaber_female
ENSEASG00005015957	RNPC3	100	90.541	ENSHGLG00100003005	RNPC3	100	90.541	Heterocephalus_glaber_male
ENSEASG00005015957	RNPC3	95	55.467	ENSHCOG00000017135	rnpc3	97	55.242	Hippocampus_comes
ENSEASG00005015957	RNPC3	95	56.827	ENSIPUG00000002916	rnpc3	97	56.827	Ictalurus_punctatus
ENSEASG00005015957	RNPC3	100	90.154	ENSSTOG00000025020	RNPC3	100	90.154	Ictidomys_tridecemlineatus
ENSEASG00005015957	RNPC3	99	85.880	ENSJJAG00000010203	Rnpc3	100	87.427	Jaculus_jaculus
ENSEASG00005015957	RNPC3	95	55.466	ENSKMAG00000017358	rnpc3	97	54.871	Kryptolebias_marmoratus
ENSEASG00005015957	RNPC3	95	56.539	ENSLBEG00000024901	rnpc3	95	56.539	Labrus_bergylta
ENSEASG00005015957	RNPC3	94	63.211	ENSLACG00000005720	RNPC3	90	63.821	Latimeria_chalumnae
ENSEASG00005015957	RNPC3	94	59.388	ENSLOCG00000007986	rnpc3	96	61.633	Lepisosteus_oculatus
ENSEASG00005015957	RNPC3	99	90.135	ENSLAFG00000032342	RNPC3	100	90.522	Loxodonta_africana
ENSEASG00005015957	RNPC3	99	66.928	ENSMFAG00000002917	-	99	67.456	Macaca_fascicularis
ENSEASG00005015957	RNPC3	99	92.248	ENSMFAG00000002004	RNPC3	99	92.248	Macaca_fascicularis
ENSEASG00005015957	RNPC3	84	83.178	ENSMMUG00000002098	-	93	83.178	Macaca_mulatta
ENSEASG00005015957	RNPC3	99	91.860	ENSMMUG00000018039	RNPC3	99	91.860	Macaca_mulatta
ENSEASG00005015957	RNPC3	99	63.796	ENSMNEG00000029209	-	99	66.732	Macaca_nemestrina
ENSEASG00005015957	RNPC3	99	87.597	ENSMNEG00000033950	RNPC3	99	87.597	Macaca_nemestrina
ENSEASG00005015957	RNPC3	99	92.442	ENSMLEG00000033628	RNPC3	99	92.442	Mandrillus_leucophaeus
ENSEASG00005015957	RNPC3	98	69.276	ENSMLEG00000034644	-	98	68.288	Mandrillus_leucophaeus
ENSEASG00005015957	RNPC3	95	52.183	ENSMAMG00000007496	rnpc3	97	51.068	Mastacembelus_armatus
ENSEASG00005015957	RNPC3	94	54.150	ENSMZEG00005020233	rnpc3	97	54.150	Maylandia_zebra
ENSEASG00005015957	RNPC3	87	71.868	ENSMGAG00000006381	RNPC3	99	72.088	Meleagris_gallopavo
ENSEASG00005015957	RNPC3	96	90.782	ENSMAUG00000001358	Rnpc3	100	89.555	Mesocricetus_auratus
ENSEASG00005015957	RNPC3	99	92.263	ENSMICG00000029591	RNPC3	99	92.263	Microcebus_murinus
ENSEASG00005015957	RNPC3	97	90.200	ENSMOCG00000013423	Rnpc3	100	88.803	Microtus_ochrogaster
ENSEASG00005015957	RNPC3	95	52.439	ENSMMOG00000005309	rnpc3	97	52.410	Mola_mola
ENSEASG00005015957	RNPC3	99	78.295	ENSMODG00000002946	RNPC3	99	78.295	Monodelphis_domestica
ENSEASG00005015957	RNPC3	94	54.217	ENSMALG00000015471	rnpc3	97	53.707	Monopterus_albus
ENSEASG00005015957	RNPC3	99	87.403	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.403	Mus_caroli
ENSEASG00005015957	RNPC3	99	87.791	ENSMUSG00000027981	Rnpc3	100	87.791	Mus_musculus
ENSEASG00005015957	RNPC3	99	87.791	MGP_PahariEiJ_G0027001	Rnpc3	100	87.791	Mus_pahari
ENSEASG00005015957	RNPC3	99	87.209	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.209	Mus_spretus
ENSEASG00005015957	RNPC3	100	92.278	ENSMPUG00000007349	RNPC3	100	92.278	Mustela_putorius_furo
ENSEASG00005015957	RNPC3	100	89.768	ENSMLUG00000028743	RNPC3	100	89.768	Myotis_lucifugus
ENSEASG00005015957	RNPC3	99	89.147	ENSNGAG00000010939	Rnpc3	99	89.147	Nannospalax_galili
ENSEASG00005015957	RNPC3	94	54.767	ENSNBRG00000012196	rnpc3	93	54.767	Neolamprologus_brichardi
ENSEASG00005015957	RNPC3	100	92.471	ENSNLEG00000012013	RNPC3	100	92.471	Nomascus_leucogenys
ENSEASG00005015957	RNPC3	100	87.838	ENSODEG00000007612	RNPC3	100	87.838	Octodon_degus
ENSEASG00005015957	RNPC3	94	55.781	ENSONIG00000004770	rnpc3	99	55.781	Oreochromis_niloticus
ENSEASG00005015957	RNPC3	90	76.824	ENSOANG00000008220	RNPC3	99	76.824	Ornithorhynchus_anatinus
ENSEASG00005015957	RNPC3	100	91.506	ENSOCUG00000004016	RNPC3	100	91.506	Oryctolagus_cuniculus
ENSEASG00005015957	RNPC3	95	54.032	ENSORLG00000005694	rnpc3	97	54.032	Oryzias_latipes
ENSEASG00005015957	RNPC3	95	54.637	ENSORLG00020005513	rnpc3	97	54.637	Oryzias_latipes_hni
ENSEASG00005015957	RNPC3	95	54.234	ENSORLG00015002179	rnpc3	97	54.234	Oryzias_latipes_hsok
ENSEASG00005015957	RNPC3	95	54.637	ENSOMEG00000017737	rnpc3	97	55.734	Oryzias_melastigma
ENSEASG00005015957	RNPC3	100	92.664	ENSOGAG00000026182	RNPC3	100	92.664	Otolemur_garnettii
ENSEASG00005015957	RNPC3	100	93.050	ENSOARG00000018719	RNPC3	100	93.050	Ovis_aries
ENSEASG00005015957	RNPC3	100	92.100	ENSPPAG00000037459	RNPC3	100	92.100	Pan_paniscus
ENSEASG00005015957	RNPC3	100	74.855	ENSPPAG00000030278	-	100	75.048	Pan_paniscus
ENSEASG00005015957	RNPC3	100	93.822	ENSPPRG00000020246	RNPC3	100	93.822	Panthera_pardus
ENSEASG00005015957	RNPC3	98	93.898	ENSPTIG00000009887	RNPC3	100	93.898	Panthera_tigris_altaica
ENSEASG00005015957	RNPC3	100	74.468	ENSPTRG00000044227	-	100	74.468	Pan_troglodytes
ENSEASG00005015957	RNPC3	100	92.278	ENSPTRG00000033902	RNPC3	100	92.278	Pan_troglodytes
ENSEASG00005015957	RNPC3	98	73.031	ENSPANG00000029957	-	100	71.850	Papio_anubis
ENSEASG00005015957	RNPC3	99	92.442	ENSPANG00000012137	RNPC3	99	92.442	Papio_anubis
ENSEASG00005015957	RNPC3	94	53.252	ENSPKIG00000008828	rnpc3	95	52.259	Paramormyrops_kingsleyae
ENSEASG00005015957	RNPC3	63	69.394	ENSPSIG00000007396	RNPC3	99	67.879	Pelodiscus_sinensis
ENSEASG00005015957	RNPC3	93	51.527	ENSPMGG00000011742	rnpc3	95	52.041	Periophthalmus_magnuspinnatus
ENSEASG00005015957	RNPC3	88	88.403	ENSPEMG00000020112	Rnpc3	100	89.159	Peromyscus_maniculatus_bairdii
ENSEASG00005015957	RNPC3	96	45.019	ENSPMAG00000003778	rnpc3	98	45.889	Petromyzon_marinus
ENSEASG00005015957	RNPC3	99	79.264	ENSPCIG00000004415	-	99	79.264	Phascolarctos_cinereus
ENSEASG00005015957	RNPC3	95	53.693	ENSPFOG00000009895	rnpc3	97	53.693	Poecilia_formosa
ENSEASG00005015957	RNPC3	95	53.693	ENSPLAG00000012023	rnpc3	97	53.693	Poecilia_latipinna
ENSEASG00005015957	RNPC3	96	53.082	ENSPMEG00000003663	rnpc3	97	53.892	Poecilia_mexicana
ENSEASG00005015957	RNPC3	96	53.465	ENSPREG00000010206	rnpc3	99	53.295	Poecilia_reticulata
ENSEASG00005015957	RNPC3	84	88.506	ENSPPYG00000001102	RNPC3	99	88.506	Pongo_abelii
ENSEASG00005015957	RNPC3	94	54.767	ENSPNYG00000020603	rnpc3	96	54.767	Pundamilia_nyererei
ENSEASG00005015957	RNPC3	95	54.183	ENSPNAG00000000524	rnpc3	89	54.871	Pygocentrus_nattereri
ENSEASG00005015957	RNPC3	99	87.234	ENSRNOG00000017310	Rnpc3	100	87.234	Rattus_norvegicus
ENSEASG00005015957	RNPC3	99	86.654	ENSRBIG00000043897	RNPC3	99	86.654	Rhinopithecus_bieti
ENSEASG00005015957	RNPC3	99	92.442	ENSRROG00000032334	RNPC3	99	92.442	Rhinopithecus_roxellana
ENSEASG00005015957	RNPC3	100	91.313	ENSSBOG00000024473	RNPC3	100	91.313	Saimiri_boliviensis_boliviensis
ENSEASG00005015957	RNPC3	99	78.488	ENSSHAG00000011859	RNPC3	99	78.488	Sarcophilus_harrisii
ENSEASG00005015957	RNPC3	95	59.312	ENSSFOG00015013055	rnpc3	99	57.283	Scleropages_formosus
ENSEASG00005015957	RNPC3	95	52.695	ENSSMAG00000020346	rnpc3	97	50.969	Scophthalmus_maximus
ENSEASG00005015957	RNPC3	94	55.689	ENSSDUG00000006600	rnpc3	96	55.689	Seriola_dumerili
ENSEASG00005015957	RNPC3	94	55.489	ENSSLDG00000007979	rnpc3	96	55.489	Seriola_lalandi_dorsalis
ENSEASG00005015957	RNPC3	95	71.400	ENSSPUG00000008539	-	94	71.748	Sphenodon_punctatus
ENSEASG00005015957	RNPC3	96	65.800	ENSSPUG00000003872	-	92	66.129	Sphenodon_punctatus
ENSEASG00005015957	RNPC3	95	55.894	ENSSPAG00000005633	rnpc3	97	56.504	Stegastes_partitus
ENSEASG00005015957	RNPC3	100	91.699	ENSSSCG00000037254	RNPC3	100	91.506	Sus_scrofa
ENSEASG00005015957	RNPC3	87	72.185	ENSTGUG00000004795	-	99	71.302	Taeniopygia_guttata
ENSEASG00005015957	RNPC3	95	55.061	ENSTNIG00000018963	rnpc3	97	55.061	Tetraodon_nigroviridis
ENSEASG00005015957	RNPC3	98	93.898	ENSUMAG00000007775	RNPC3	100	93.898	Ursus_maritimus
ENSEASG00005015957	RNPC3	100	93.629	ENSVVUG00000000331	RNPC3	100	93.629	Vulpes_vulpes
ENSEASG00005015957	RNPC3	95	51.800	ENSXETG00000025027	rnpc3	97	51.800	Xenopus_tropicalis
ENSEASG00005015957	RNPC3	96	52.642	ENSXCOG00000005013	rnpc3	97	51.440	Xiphophorus_couchianus
ENSEASG00005015957	RNPC3	96	54.043	ENSXMAG00000006495	rnpc3	97	54.274	Xiphophorus_maculatus