EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005017000 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 70114 bases
Position: chrPSZQ01001020.1:18242142-18312255
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005025002	zf-CCCH	PF00642.24	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005027131	RC3H1-201	3834	-	ENSEASP00005025002	1122 (aa)	-	UPI00071A400B

Gene Model

Click here to download ENSEASG00005017000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005017000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005017000	RC3H1	92	53.023	ENSEASG00005020897	RC3H2	94	78.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005017000	RC3H1	100	96.622	ENSG00000135870	RC3H1	100	96.622	Homo_sapiens
ENSEASG00005017000	RC3H1	100	95.671	ENSAMEG00000015657	RC3H1	100	95.671	Ailuropoda_melanoleuca
ENSEASG00005017000	RC3H1	100	86.649	ENSAPLG00000005341	RC3H1	100	86.114	Anas_platyrhynchos
ENSEASG00005017000	RC3H1	100	84.454	ENSACAG00000015271	RC3H1	100	84.164	Anolis_carolinensis
ENSEASG00005017000	RC3H1	100	96.205	ENSANAG00000036716	RC3H1	100	96.205	Aotus_nancymaae
ENSEASG00005017000	RC3H1	100	95.907	ENSBTAG00000052708	RC3H1	100	95.907	Bos_taurus
ENSEASG00005017000	RC3H1	100	95.852	ENSCJAG00000009106	RC3H1	100	95.852	Callithrix_jacchus
ENSEASG00005017000	RC3H1	100	95.671	ENSCAFG00000014434	RC3H1	100	95.671	Canis_familiaris
ENSEASG00005017000	RC3H1	100	95.587	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSEASG00005017000	RC3H1	100	96.527	ENSCHIG00000002873	RC3H1	100	96.527	Capra_hircus
ENSEASG00005017000	RC3H1	99	93.905	ENSTSYG00000003913	RC3H1	99	93.905	Carlito_syrichta
ENSEASG00005017000	RC3H1	100	90.115	ENSCPOG00000004349	RC3H1	100	89.938	Cavia_porcellus
ENSEASG00005017000	RC3H1	100	93.645	ENSCCAG00000025652	RC3H1	100	93.733	Cebus_capucinus
ENSEASG00005017000	RC3H1	100	96.117	ENSCATG00000033497	RC3H1	100	96.117	Cercocebus_atys
ENSEASG00005017000	RC3H1	100	93.557	ENSCLAG00000011267	RC3H1	100	93.557	Chinchilla_lanigera
ENSEASG00005017000	RC3H1	96	96.133	ENSCSAG00000011823	RC3H1	85	96.133	Chlorocebus_sabaeus
ENSEASG00005017000	RC3H1	100	88.147	ENSCPBG00000014670	RC3H1	100	87.709	Chrysemys_picta_bellii
ENSEASG00005017000	RC3H1	100	96.120	ENSCANG00000032120	RC3H1	100	96.120	Colobus_angolensis_palliatus
ENSEASG00005017000	RC3H1	100	92.927	ENSCGRG00001020812	Rc3h1	100	92.573	Cricetulus_griseus_chok1gshd
ENSEASG00005017000	RC3H1	100	92.927	ENSCGRG00000011952	Rc3h1	100	92.573	Cricetulus_griseus_crigri
ENSEASG00005017000	RC3H1	55	94.032	ENSDNOG00000011494	RC3H1	99	94.032	Dasypus_novemcinctus
ENSEASG00005017000	RC3H1	100	94.346	ENSDORG00000004855	Rc3h1	100	94.346	Dipodomys_ordii
ENSEASG00005017000	RC3H1	82	95.569	ENSETEG00000012064	RC3H1	87	95.569	Echinops_telfairi
ENSEASG00005017000	RC3H1	100	99.822	ENSECAG00000021208	RC3H1	100	99.822	Equus_caballus
ENSEASG00005017000	RC3H1	83	96.218	ENSEEUG00000014861	RC3H1	93	82.931	Erinaceus_europaeus
ENSEASG00005017000	RC3H1	100	96.028	ENSFCAG00000014924	RC3H1	100	96.028	Felis_catus
ENSEASG00005017000	RC3H1	100	85.577	ENSFALG00000002947	RC3H1	100	84.427	Ficedula_albicollis
ENSEASG00005017000	RC3H1	100	93.998	ENSFDAG00000013303	RC3H1	100	93.998	Fukomys_damarensis
ENSEASG00005017000	RC3H1	100	87.533	ENSGALG00000004587	RC3H1	100	86.903	Gallus_gallus
ENSEASG00005017000	RC3H1	100	87.965	ENSGAGG00000018194	RC3H1	100	87.876	Gopherus_agassizii
ENSEASG00005017000	RC3H1	100	89.094	ENSGGOG00000005735	RC3H1	100	89.094	Gorilla_gorilla
ENSEASG00005017000	RC3H1	88	88.482	ENSHGLG00000004183	-	99	88.451	Heterocephalus_glaber_female
ENSEASG00005017000	RC3H1	100	93.116	ENSHGLG00100008577	RC3H1	100	93.116	Heterocephalus_glaber_male
ENSEASG00005017000	RC3H1	100	94.704	ENSSTOG00000016033	RC3H1	100	94.704	Ictidomys_tridecemlineatus
ENSEASG00005017000	RC3H1	100	93.640	ENSJJAG00000018915	Rc3h1	100	93.551	Jaculus_jaculus
ENSEASG00005017000	RC3H1	100	74.913	ENSLACG00000016186	RC3H1	100	78.046	Latimeria_chalumnae
ENSEASG00005017000	RC3H1	97	95.807	ENSLAFG00000004367	RC3H1	100	95.807	Loxodonta_africana
ENSEASG00005017000	RC3H1	100	96.028	ENSMFAG00000033725	RC3H1	100	96.028	Macaca_fascicularis
ENSEASG00005017000	RC3H1	100	96.622	ENSMMUG00000000630	RC3H1	100	96.622	Macaca_mulatta
ENSEASG00005017000	RC3H1	100	96.117	ENSMNEG00000035968	RC3H1	100	96.117	Macaca_nemestrina
ENSEASG00005017000	RC3H1	100	96.028	ENSMLEG00000037455	RC3H1	100	96.028	Mandrillus_leucophaeus
ENSEASG00005017000	RC3H1	100	85.574	ENSMAUG00000020864	Rc3h1	100	85.129	Mesocricetus_auratus
ENSEASG00005017000	RC3H1	100	95.936	ENSMICG00000003000	RC3H1	100	95.936	Microcebus_murinus
ENSEASG00005017000	RC3H1	93	91.564	ENSMOCG00000016587	Rc3h1	98	91.280	Microtus_ochrogaster
ENSEASG00005017000	RC3H1	100	90.917	ENSMODG00000004289	RC3H1	100	91.005	Monodelphis_domestica
ENSEASG00005017000	RC3H1	100	92.049	MGP_CAROLIEiJ_G0014756	Rc3h1	100	91.254	Mus_caroli
ENSEASG00005017000	RC3H1	100	92.698	ENSMUSG00000040423	Rc3h1	100	92.342	Mus_musculus
ENSEASG00005017000	RC3H1	100	91.873	MGP_PahariEiJ_G0027992	Rc3h1	100	91.519	Mus_pahari
ENSEASG00005017000	RC3H1	100	92.520	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.164	Mus_spretus
ENSEASG00005017000	RC3H1	100	95.410	ENSMPUG00000004747	RC3H1	100	95.410	Mustela_putorius_furo
ENSEASG00005017000	RC3H1	100	94.081	ENSMLUG00000011127	RC3H1	100	94.081	Myotis_lucifugus
ENSEASG00005017000	RC3H1	100	94.258	ENSNGAG00000011135	Rc3h1	100	93.905	Nannospalax_galili
ENSEASG00005017000	RC3H1	100	95.852	ENSNLEG00000015327	RC3H1	100	95.852	Nomascus_leucogenys
ENSEASG00005017000	RC3H1	99	81.947	ENSOPRG00000013068	RC3H1	99	81.383	Ochotona_princeps
ENSEASG00005017000	RC3H1	100	93.292	ENSODEG00000014185	RC3H1	100	93.292	Octodon_degus
ENSEASG00005017000	RC3H1	100	89.345	ENSOANG00000000924	RC3H1	100	89.432	Ornithorhynchus_anatinus
ENSEASG00005017000	RC3H1	99	94.982	ENSOCUG00000004930	RC3H1	98	94.982	Oryctolagus_cuniculus
ENSEASG00005017000	RC3H1	100	88.624	ENSOGAG00000004044	RC3H1	100	88.624	Otolemur_garnettii
ENSEASG00005017000	RC3H1	100	95.088	ENSOARG00000013011	RC3H1	100	95.088	Ovis_aries
ENSEASG00005017000	RC3H1	100	95.944	ENSPPAG00000039253	RC3H1	100	95.944	Pan_paniscus
ENSEASG00005017000	RC3H1	100	97.061	ENSPPRG00000009007	RC3H1	100	97.061	Panthera_pardus
ENSEASG00005017000	RC3H1	100	95.866	ENSPTIG00000015326	RC3H1	100	95.866	Panthera_tigris_altaica
ENSEASG00005017000	RC3H1	100	95.944	ENSPTRG00000001702	RC3H1	100	95.944	Pan_troglodytes
ENSEASG00005017000	RC3H1	100	96.028	ENSPANG00000008886	RC3H1	100	96.028	Papio_anubis
ENSEASG00005017000	RC3H1	100	88.771	ENSPSIG00000016181	RC3H1	100	88.948	Pelodiscus_sinensis
ENSEASG00005017000	RC3H1	100	92.580	ENSPEMG00000011966	Rc3h1	100	92.138	Peromyscus_maniculatus_bairdii
ENSEASG00005017000	RC3H1	70	93.544	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSEASG00005017000	RC3H1	100	92.498	ENSPPYG00000000490	RC3H1	98	96.718	Pongo_abelii
ENSEASG00005017000	RC3H1	80	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSEASG00005017000	RC3H1	82	94.973	ENSPCOG00000021795	RC3H1	96	94.973	Propithecus_coquereli
ENSEASG00005017000	RC3H1	100	86.572	ENSPVAG00000007593	RC3H1	100	86.572	Pteropus_vampyrus
ENSEASG00005017000	RC3H1	97	62.023	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSEASG00005017000	RC3H1	100	96.032	ENSRBIG00000037743	RC3H1	100	96.032	Rhinopithecus_bieti
ENSEASG00005017000	RC3H1	100	95.940	ENSRROG00000036546	RC3H1	100	95.940	Rhinopithecus_roxellana
ENSEASG00005017000	RC3H1	93	91.882	ENSSBOG00000010664	RC3H1	100	91.882	Saimiri_boliviensis_boliviensis
ENSEASG00005017000	RC3H1	100	90.132	ENSSHAG00000007589	RC3H1	100	90.220	Sarcophilus_harrisii
ENSEASG00005017000	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSEASG00005017000	RC3H1	100	82.647	ENSSPUG00000018472	RC3H1	100	82.105	Sphenodon_punctatus
ENSEASG00005017000	RC3H1	100	96.616	ENSSSCG00000015498	RC3H1	100	96.616	Sus_scrofa
ENSEASG00005017000	RC3H1	100	86.216	ENSTGUG00000004090	RC3H1	100	85.501	Taeniopygia_guttata
ENSEASG00005017000	RC3H1	89	96.458	ENSTBEG00000005015	RC3H1	88	96.458	Tupaia_belangeri
ENSEASG00005017000	RC3H1	100	95.330	ENSTTRG00000008572	RC3H1	100	95.330	Tursiops_truncatus
ENSEASG00005017000	RC3H1	100	95.053	ENSUAMG00000019525	RC3H1	100	95.053	Ursus_americanus
ENSEASG00005017000	RC3H1	100	95.587	ENSUMAG00000020087	RC3H1	100	95.587	Ursus_maritimus
ENSEASG00005017000	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSEASG00005017000	RC3H1	100	95.423	ENSVVUG00000014201	RC3H1	100	95.423	Vulpes_vulpes
ENSEASG00005017000	RC3H1	100	77.787	ENSXETG00000020030	rc3h1	100	77.681	Xenopus_tropicalis