EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005017693 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 100779 bases
Position: chrPSZQ01005824.1:1887961-1988739
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005025933	Ago_hook	PF10427.9	4.1e-19	1	1
ENSEASP00005025923	Ago_hook	PF10427.9	4.2e-19	1	1
ENSEASP00005025937	Ago_hook	PF10427.9	7.8e-15	1	1
ENSEASP00005025927	Ago_hook	PF10427.9	8.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005028157	TNRC6A-204	7394	-	ENSEASP00005025937	1917 (aa)	-	-
ENSEAST00005028147	TNRC6A-202	7349	-	ENSEASP00005025927	1902 (aa)	-	-
ENSEAST00005028153	TNRC6A-203	7103	-	ENSEASP00005025933	1820 (aa)	-	-
ENSEAST00005028143	TNRC6A-201	7496	-	ENSEASP00005025923	1951 (aa)	-	-

Gene Model

Click here to download ENSEASG00005017693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005017693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005017693	TNRC6A	90	43.280	ENSEASG00005004799	TNRC6C	99	43.764
ENSEASG00005017693	TNRC6A	98	41.480	ENSEASG00005005306	TNRC6B	99	37.883

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005017693	TNRC6A	100	96.944	ENSG00000090905	TNRC6A	100	96.587	Homo_sapiens
ENSEASG00005017693	TNRC6A	99	96.751	ENSAMEG00000009333	TNRC6A	100	96.864	Ailuropoda_melanoleuca
ENSEASG00005017693	TNRC6A	99	82.251	ENSAPLG00000009978	TNRC6A	100	81.832	Anas_platyrhynchos
ENSEASG00005017693	TNRC6A	100	68.966	ENSACAG00000011857	TNRC6A	100	56.592	Anolis_carolinensis
ENSEASG00005017693	TNRC6A	100	96.831	ENSANAG00000025252	TNRC6A	100	96.578	Aotus_nancymaae
ENSEASG00005017693	TNRC6A	97	56.399	ENSAMXG00000019919	tnrc6a	100	57.060	Astyanax_mexicanus
ENSEASG00005017693	TNRC6A	100	96.324	ENSBTAG00000017999	TNRC6A	100	96.324	Bos_taurus
ENSEASG00005017693	TNRC6A	100	98.182	ENSCJAG00000020677	TNRC6A	100	95.937	Callithrix_jacchus
ENSEASG00005017693	TNRC6A	99	97.225	ENSCAFG00000017531	TNRC6A	100	96.731	Canis_familiaris
ENSEASG00005017693	TNRC6A	99	94.809	ENSCAFG00020021160	TNRC6A	99	94.861	Canis_lupus_dingo
ENSEASG00005017693	TNRC6A	100	96.218	ENSCHIG00000019448	TNRC6A	100	96.218	Capra_hircus
ENSEASG00005017693	TNRC6A	100	96.661	ENSTSYG00000012711	TNRC6A	100	96.274	Carlito_syrichta
ENSEASG00005017693	TNRC6A	99	96.318	ENSCPOG00000036684	TNRC6A	100	96.318	Cavia_porcellus
ENSEASG00005017693	TNRC6A	100	96.774	ENSCCAG00000033664	TNRC6A	100	96.480	Cebus_capucinus
ENSEASG00005017693	TNRC6A	99	96.113	ENSCATG00000019284	TNRC6A	99	96.113	Cercocebus_atys
ENSEASG00005017693	TNRC6A	100	90.995	ENSCLAG00000010217	TNRC6A	100	91.099	Chinchilla_lanigera
ENSEASG00005017693	TNRC6A	100	97.001	ENSCSAG00000006561	TNRC6A	100	96.583	Chlorocebus_sabaeus
ENSEASG00005017693	TNRC6A	95	91.293	ENSCHOG00000009374	TNRC6A	95	91.156	Choloepus_hoffmanni
ENSEASG00005017693	TNRC6A	97	79.820	ENSCPBG00000001881	TNRC6A	99	81.823	Chrysemys_picta_bellii
ENSEASG00005017693	TNRC6A	100	97.057	ENSCANG00000041549	TNRC6A	100	96.682	Colobus_angolensis_palliatus
ENSEASG00005017693	TNRC6A	100	94.908	ENSCGRG00001015021	Tnrc6a	100	94.856	Cricetulus_griseus_chok1gshd
ENSEASG00005017693	TNRC6A	99	93.963	ENSCGRG00000013351	Tnrc6a	99	93.911	Cricetulus_griseus_crigri
ENSEASG00005017693	TNRC6A	97	56.424	ENSDARG00000079688	tnrc6a	99	56.846	Danio_rerio
ENSEASG00005017693	TNRC6A	99	93.908	ENSDNOG00000013989	TNRC6A	99	93.920	Dasypus_novemcinctus
ENSEASG00005017693	TNRC6A	99	85.684	ENSETEG00000014658	TNRC6A	99	85.767	Echinops_telfairi
ENSEASG00005017693	TNRC6A	100	99.897	ENSECAG00000025056	TNRC6A	100	99.897	Equus_caballus
ENSEASG00005017693	TNRC6A	99	88.906	ENSEEUG00000004530	TNRC6A	99	88.982	Erinaceus_europaeus
ENSEASG00005017693	TNRC6A	100	95.810	ENSFCAG00000025236	TNRC6A	100	95.396	Felis_catus
ENSEASG00005017693	TNRC6A	97	81.475	ENSFALG00000003757	TNRC6A	93	87.037	Ficedula_albicollis
ENSEASG00005017693	TNRC6A	97	80.416	ENSGALG00000006068	TNRC6A	99	82.488	Gallus_gallus
ENSEASG00005017693	TNRC6A	97	79.169	ENSGAGG00000023209	TNRC6A	99	81.379	Gopherus_agassizii
ENSEASG00005017693	TNRC6A	99	96.454	ENSGGOG00000005137	TNRC6A	99	96.454	Gorilla_gorilla
ENSEASG00005017693	TNRC6A	99	93.368	ENSHGLG00000012474	-	100	93.211	Heterocephalus_glaber_female
ENSEASG00005017693	TNRC6A	97	72.439	ENSHGLG00000007368	-	93	73.908	Heterocephalus_glaber_female
ENSEASG00005017693	TNRC6A	99	93.147	ENSHGLG00100012496	-	100	92.989	Heterocephalus_glaber_male
ENSEASG00005017693	TNRC6A	99	96.038	ENSSTOG00000023394	TNRC6A	99	94.758	Ictidomys_tridecemlineatus
ENSEASG00005017693	TNRC6A	99	69.845	ENSLACG00000006277	TNRC6A	100	70.415	Latimeria_chalumnae
ENSEASG00005017693	TNRC6A	99	82.781	ENSLOCG00000005517	tnrc6a	93	82.781	Lepisosteus_oculatus
ENSEASG00005017693	TNRC6A	98	95.526	ENSLAFG00000004209	TNRC6A	99	95.523	Loxodonta_africana
ENSEASG00005017693	TNRC6A	99	94.344	ENSMFAG00000003824	TNRC6A	99	94.384	Macaca_fascicularis
ENSEASG00005017693	TNRC6A	100	96.944	ENSMMUG00000020428	TNRC6A	100	96.478	Macaca_mulatta
ENSEASG00005017693	TNRC6A	100	96.887	ENSMNEG00000034854	TNRC6A	100	96.089	Macaca_nemestrina
ENSEASG00005017693	TNRC6A	99	94.243	ENSMLEG00000042737	TNRC6A	97	93.983	Mandrillus_leucophaeus
ENSEASG00005017693	TNRC6A	97	82.745	ENSMGAG00000006455	TNRC6A	93	87.037	Meleagris_gallopavo
ENSEASG00005017693	TNRC6A	100	94.850	ENSMAUG00000012750	Tnrc6a	100	94.587	Mesocricetus_auratus
ENSEASG00005017693	TNRC6A	100	97.510	ENSMICG00000030685	TNRC6A	100	96.994	Microcebus_murinus
ENSEASG00005017693	TNRC6A	100	94.693	ENSMOCG00000000152	Tnrc6a	100	94.377	Microtus_ochrogaster
ENSEASG00005017693	TNRC6A	99	82.024	ENSMODG00000016348	TNRC6A	99	81.913	Monodelphis_domestica
ENSEASG00005017693	TNRC6A	99	92.736	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.571	Mus_caroli
ENSEASG00005017693	TNRC6A	100	93.484	ENSMUSG00000052707	Tnrc6a	100	93.169	Mus_musculus
ENSEASG00005017693	TNRC6A	99	93.694	MGP_PahariEiJ_G0013635	Tnrc6a	100	94.429	Mus_pahari
ENSEASG00005017693	TNRC6A	100	93.391	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.857	Mus_spretus
ENSEASG00005017693	TNRC6A	97	84.727	ENSMPUG00000012324	TNRC6A	100	84.566	Mustela_putorius_furo
ENSEASG00005017693	TNRC6A	99	94.043	ENSMLUG00000002701	TNRC6A	100	93.569	Myotis_lucifugus
ENSEASG00005017693	TNRC6A	99	95.478	ENSNGAG00000020702	Tnrc6a	100	95.373	Nannospalax_galili
ENSEASG00005017693	TNRC6A	99	93.354	ENSNLEG00000011851	TNRC6A	98	93.908	Nomascus_leucogenys
ENSEASG00005017693	TNRC6A	77	89.049	ENSMEUG00000015959	-	77	88.606	Notamacropus_eugenii
ENSEASG00005017693	TNRC6A	96	98.507	ENSOPRG00000005819	TNRC6A	96	98.507	Ochotona_princeps
ENSEASG00005017693	TNRC6A	99	89.449	ENSODEG00000012802	TNRC6A	99	89.396	Octodon_degus
ENSEASG00005017693	TNRC6A	94	82.860	ENSOANG00000007672	TNRC6A	100	82.629	Ornithorhynchus_anatinus
ENSEASG00005017693	TNRC6A	99	92.733	ENSOCUG00000004325	TNRC6A	100	92.628	Oryctolagus_cuniculus
ENSEASG00005017693	TNRC6A	99	97.062	ENSOGAG00000006666	TNRC6A	100	97.062	Otolemur_garnettii
ENSEASG00005017693	TNRC6A	99	94.911	ENSOARG00000017950	TNRC6A	98	96.564	Ovis_aries
ENSEASG00005017693	TNRC6A	99	96.887	ENSPPAG00000028379	TNRC6A	100	96.287	Pan_paniscus
ENSEASG00005017693	TNRC6A	100	95.810	ENSPPRG00000005861	TNRC6A	100	95.396	Panthera_pardus
ENSEASG00005017693	TNRC6A	99	95.753	ENSPTIG00000006346	TNRC6A	99	94.034	Panthera_tigris_altaica
ENSEASG00005017693	TNRC6A	99	95.838	ENSPTRG00000007898	TNRC6A	99	95.838	Pan_troglodytes
ENSEASG00005017693	TNRC6A	100	94.454	ENSPANG00000018523	TNRC6A	100	94.151	Papio_anubis
ENSEASG00005017693	TNRC6A	93	75.369	ENSPKIG00000012859	tnrc6a	96	77.925	Paramormyrops_kingsleyae
ENSEASG00005017693	TNRC6A	83	75.098	ENSPSIG00000003965	TNRC6A	100	77.380	Pelodiscus_sinensis
ENSEASG00005017693	TNRC6A	100	93.957	ENSPEMG00000016318	Tnrc6a	100	94.003	Peromyscus_maniculatus_bairdii
ENSEASG00005017693	TNRC6A	99	83.727	ENSPCIG00000012106	TNRC6A	100	83.675	Phascolarctos_cinereus
ENSEASG00005017693	TNRC6A	99	96.435	ENSPPYG00000007202	TNRC6A	100	95.874	Pongo_abelii
ENSEASG00005017693	TNRC6A	95	98.148	ENSPCAG00000008260	TNRC6A	94	97.938	Procavia_capensis
ENSEASG00005017693	TNRC6A	100	94.963	ENSPCOG00000010134	TNRC6A	100	94.699	Propithecus_coquereli
ENSEASG00005017693	TNRC6A	88	73.586	ENSPVAG00000012066	TNRC6A	99	71.001	Pteropus_vampyrus
ENSEASG00005017693	TNRC6A	100	92.909	ENSRNOG00000024737	Tnrc6a	100	92.857	Rattus_norvegicus
ENSEASG00005017693	TNRC6A	99	96.532	ENSRBIG00000014222	TNRC6A	100	96.532	Rhinopithecus_bieti
ENSEASG00005017693	TNRC6A	100	96.829	ENSRROG00000032360	TNRC6A	100	96.829	Rhinopithecus_roxellana
ENSEASG00005017693	TNRC6A	99	95.947	ENSSBOG00000036197	TNRC6A	100	97.193	Saimiri_boliviensis_boliviensis
ENSEASG00005017693	TNRC6A	97	81.747	ENSSHAG00000008811	TNRC6A	99	83.941	Sarcophilus_harrisii
ENSEASG00005017693	TNRC6A	93	66.816	ENSSFOG00015008920	tnrc6a	99	64.812	Scleropages_formosus
ENSEASG00005017693	TNRC6A	73	84.601	ENSSARG00000002479	TNRC6A	89	83.514	Sorex_araneus
ENSEASG00005017693	TNRC6A	97	78.456	ENSSPUG00000010525	TNRC6A	100	78.344	Sphenodon_punctatus
ENSEASG00005017693	TNRC6A	100	96.608	ENSSSCG00000038870	TNRC6A	100	98.069	Sus_scrofa
ENSEASG00005017693	TNRC6A	99	79.718	ENSTGUG00000006142	TNRC6A	100	80.136	Taeniopygia_guttata
ENSEASG00005017693	TNRC6A	99	93.979	ENSTBEG00000014965	TNRC6A	100	94.099	Tupaia_belangeri
ENSEASG00005017693	TNRC6A	94	97.737	ENSTTRG00000002008	TNRC6A	93	97.737	Tursiops_truncatus
ENSEASG00005017693	TNRC6A	79	96.858	ENSUAMG00000006656	-	93	96.858	Ursus_americanus
ENSEASG00005017693	TNRC6A	99	96.684	ENSUMAG00000008274	TNRC6A	100	97.590	Ursus_maritimus
ENSEASG00005017693	TNRC6A	57	86.935	ENSVPAG00000010764	-	57	86.935	Vicugna_pacos
ENSEASG00005017693	TNRC6A	99	97.171	ENSVVUG00000005380	TNRC6A	100	96.636	Vulpes_vulpes
ENSEASG00005017693	TNRC6A	99	64.975	ENSXETG00000030437	TNRC6A	99	65.409	Xenopus_tropicalis