EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005018038 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 31102 bases
Position: chrPSZQ01006410.1:1936687-1967788
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005026433	MRP-S27	PF10037.9	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005028706	PTCD2-201	1149	-	ENSEASP00005026433	382 (aa)	-	-

Gene Model

Click here to download ENSEASG00005018038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005018038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005018038	PTCD2	100	79.634	ENSG00000049883	PTCD2	100	81.281	Homo_sapiens
ENSEASG00005018038	PTCD2	95	47.253	ENSAPOG00000020682	ptcd2	93	47.253	Acanthochromis_polyacanthus
ENSEASG00005018038	PTCD2	100	79.896	ENSAMEG00000007194	PTCD2	99	79.896	Ailuropoda_melanoleuca
ENSEASG00005018038	PTCD2	90	42.693	ENSACIG00000002053	ptcd2	100	42.693	Amphilophus_citrinellus
ENSEASG00005018038	PTCD2	95	46.978	ENSAOCG00000006616	ptcd2	92	46.978	Amphiprion_ocellaris
ENSEASG00005018038	PTCD2	95	46.978	ENSAPEG00000022926	ptcd2	92	46.978	Amphiprion_percula
ENSEASG00005018038	PTCD2	97	57.258	ENSACAG00000009747	PTCD2	93	57.258	Anolis_carolinensis
ENSEASG00005018038	PTCD2	100	80.940	ENSANAG00000029353	PTCD2	99	80.940	Aotus_nancymaae
ENSEASG00005018038	PTCD2	92	45.584	ENSACLG00000027742	ptcd2	90	45.584	Astatotilapia_calliptera
ENSEASG00005018038	PTCD2	86	44.207	ENSAMXG00000029404	ptcd2	87	44.207	Astyanax_mexicanus
ENSEASG00005018038	PTCD2	100	82.031	ENSBTAG00000014675	PTCD2	100	82.031	Bos_taurus
ENSEASG00005018038	PTCD2	100	80.157	ENSCJAG00000016364	PTCD2	99	80.157	Callithrix_jacchus
ENSEASG00005018038	PTCD2	100	79.634	ENSCAFG00000007982	PTCD2	90	79.634	Canis_familiaris
ENSEASG00005018038	PTCD2	91	81.503	ENSCAFG00020019147	PTCD2	97	81.503	Canis_lupus_dingo
ENSEASG00005018038	PTCD2	100	83.073	ENSCHIG00000017118	PTCD2	100	83.073	Capra_hircus
ENSEASG00005018038	PTCD2	100	73.368	ENSCPOG00000040168	PTCD2	100	73.368	Cavia_porcellus
ENSEASG00005018038	PTCD2	100	79.112	ENSCCAG00000029389	-	99	79.112	Cebus_capucinus
ENSEASG00005018038	PTCD2	83	72.327	ENSCCAG00000021996	-	98	72.327	Cebus_capucinus
ENSEASG00005018038	PTCD2	100	79.634	ENSCATG00000019069	PTCD2	100	79.634	Cercocebus_atys
ENSEASG00005018038	PTCD2	100	73.247	ENSCLAG00000000072	PTCD2	100	73.247	Chinchilla_lanigera
ENSEASG00005018038	PTCD2	100	80.157	ENSCSAG00000015623	PTCD2	100	80.157	Chlorocebus_sabaeus
ENSEASG00005018038	PTCD2	90	58.908	ENSCHOG00000010634	PTCD2	100	58.908	Choloepus_hoffmanni
ENSEASG00005018038	PTCD2	96	55.858	ENSCPBG00000000216	PTCD2	94	55.858	Chrysemys_picta_bellii
ENSEASG00005018038	PTCD2	100	79.634	ENSCANG00000035636	PTCD2	99	79.634	Colobus_angolensis_palliatus
ENSEASG00005018038	PTCD2	100	72.513	ENSCGRG00001015289	Ptcd2	84	72.513	Cricetulus_griseus_chok1gshd
ENSEASG00005018038	PTCD2	100	72.513	ENSCGRG00000006193	Ptcd2	84	72.513	Cricetulus_griseus_crigri
ENSEASG00005018038	PTCD2	99	43.501	ENSCVAG00000001285	ptcd2	94	43.501	Cyprinodon_variegatus
ENSEASG00005018038	PTCD2	97	45.040	ENSDARG00000035391	ptcd2	97	45.040	Danio_rerio
ENSEASG00005018038	PTCD2	100	76.240	ENSDNOG00000008719	PTCD2	100	76.240	Dasypus_novemcinctus
ENSEASG00005018038	PTCD2	100	75.711	ENSDORG00000004921	Ptcd2	100	75.711	Dipodomys_ordii
ENSEASG00005018038	PTCD2	100	70.052	ENSETEG00000016542	PTCD2	99	70.052	Echinops_telfairi
ENSEASG00005018038	PTCD2	100	98.953	ENSECAG00000007022	PTCD2	98	98.953	Equus_caballus
ENSEASG00005018038	PTCD2	100	74.935	ENSEEUG00000014031	PTCD2	99	74.935	Erinaceus_europaeus
ENSEASG00005018038	PTCD2	99	49.077	ENSELUG00000003584	ptcd2	96	49.077	Esox_lucius
ENSEASG00005018038	PTCD2	99	74.278	ENSFCAG00000045432	PTCD2	82	74.278	Felis_catus
ENSEASG00005018038	PTCD2	86	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSEASG00005018038	PTCD2	100	74.151	ENSFDAG00000018461	PTCD2	100	74.151	Fukomys_damarensis
ENSEASG00005018038	PTCD2	91	51.282	ENSGMOG00000003637	ptcd2	91	51.282	Gadus_morhua
ENSEASG00005018038	PTCD2	93	49.719	ENSGALG00000038260	PTCD2	95	49.591	Gallus_gallus
ENSEASG00005018038	PTCD2	100	57.143	ENSGAGG00000021952	PTCD2	98	57.143	Gopherus_agassizii
ENSEASG00005018038	PTCD2	100	79.373	ENSGGOG00000010695	PTCD2	99	79.373	Gorilla_gorilla
ENSEASG00005018038	PTCD2	92	45.584	ENSHBUG00000009191	ptcd2	90	45.584	Haplochromis_burtoni
ENSEASG00005018038	PTCD2	98	76.944	ENSHGLG00000001234	PTCD2	97	76.944	Heterocephalus_glaber_female
ENSEASG00005018038	PTCD2	98	76.944	ENSHGLG00100015419	PTCD2	97	76.944	Heterocephalus_glaber_male
ENSEASG00005018038	PTCD2	92	47.443	ENSHCOG00000001703	ptcd2	91	47.443	Hippocampus_comes
ENSEASG00005018038	PTCD2	86	45.289	ENSIPUG00000006080	ptcd2	91	45.584	Ictalurus_punctatus
ENSEASG00005018038	PTCD2	99	78.272	ENSSTOG00000006596	PTCD2	99	78.272	Ictidomys_tridecemlineatus
ENSEASG00005018038	PTCD2	100	78.329	ENSJJAG00000024388	Ptcd2	100	78.329	Jaculus_jaculus
ENSEASG00005018038	PTCD2	100	41.818	ENSKMAG00000009329	ptcd2	100	41.818	Kryptolebias_marmoratus
ENSEASG00005018038	PTCD2	98	45.067	ENSLBEG00000024871	ptcd2	95	45.067	Labrus_bergylta
ENSEASG00005018038	PTCD2	99	53.525	ENSLOCG00000011122	ptcd2	99	53.525	Lepisosteus_oculatus
ENSEASG00005018038	PTCD2	81	76.849	ENSLAFG00000004115	PTCD2	100	76.849	Loxodonta_africana
ENSEASG00005018038	PTCD2	100	79.373	ENSMFAG00000031516	PTCD2	99	79.373	Macaca_fascicularis
ENSEASG00005018038	PTCD2	100	79.373	ENSMNEG00000007537	PTCD2	100	79.373	Macaca_nemestrina
ENSEASG00005018038	PTCD2	100	79.634	ENSMLEG00000031093	PTCD2	99	79.634	Mandrillus_leucophaeus
ENSEASG00005018038	PTCD2	98	46.543	ENSMAMG00000018529	ptcd2	96	46.543	Mastacembelus_armatus
ENSEASG00005018038	PTCD2	92	45.584	ENSMZEG00005003625	ptcd2	90	45.584	Maylandia_zebra
ENSEASG00005018038	PTCD2	91	50.862	ENSMGAG00000005033	PTCD2	100	50.862	Meleagris_gallopavo
ENSEASG00005018038	PTCD2	100	58.901	ENSMAUG00000020253	Ptcd2	100	58.901	Mesocricetus_auratus
ENSEASG00005018038	PTCD2	100	78.590	ENSMICG00000004535	PTCD2	99	78.590	Microcebus_murinus
ENSEASG00005018038	PTCD2	100	76.440	ENSMOCG00000019985	Ptcd2	100	76.440	Microtus_ochrogaster
ENSEASG00005018038	PTCD2	93	60.169	ENSMODG00000001695	PTCD2	92	60.169	Monodelphis_domestica
ENSEASG00005018038	PTCD2	92	49.148	ENSMALG00000022372	ptcd2	92	49.148	Monopterus_albus
ENSEASG00005018038	PTCD2	100	71.990	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.990	Mus_caroli
ENSEASG00005018038	PTCD2	100	71.204	ENSMUSG00000021650	Ptcd2	100	71.204	Mus_musculus
ENSEASG00005018038	PTCD2	100	75.131	MGP_PahariEiJ_G0015904	Ptcd2	100	75.131	Mus_pahari
ENSEASG00005018038	PTCD2	100	71.728	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.728	Mus_spretus
ENSEASG00005018038	PTCD2	100	81.984	ENSMPUG00000014401	PTCD2	100	81.984	Mustela_putorius_furo
ENSEASG00005018038	PTCD2	100	80.418	ENSMLUG00000007374	PTCD2	99	80.418	Myotis_lucifugus
ENSEASG00005018038	PTCD2	97	74.663	ENSNGAG00000005027	Ptcd2	97	74.663	Nannospalax_galili
ENSEASG00005018038	PTCD2	86	45.921	ENSNBRG00000000092	-	100	45.921	Neolamprologus_brichardi
ENSEASG00005018038	PTCD2	92	45.869	ENSNBRG00000008174	ptcd2	92	45.869	Neolamprologus_brichardi
ENSEASG00005018038	PTCD2	100	78.851	ENSNLEG00000004516	PTCD2	99	78.851	Nomascus_leucogenys
ENSEASG00005018038	PTCD2	79	53.667	ENSMEUG00000014012	-	82	52.716	Notamacropus_eugenii
ENSEASG00005018038	PTCD2	100	74.151	ENSOPRG00000007290	PTCD2	99	74.151	Ochotona_princeps
ENSEASG00005018038	PTCD2	100	75.979	ENSODEG00000016417	PTCD2	100	75.979	Octodon_degus
ENSEASG00005018038	PTCD2	76	47.603	ENSONIG00000011269	ptcd2	85	47.603	Oreochromis_niloticus
ENSEASG00005018038	PTCD2	95	80.495	ENSOCUG00000007970	PTCD2	100	79.373	Oryctolagus_cuniculus
ENSEASG00005018038	PTCD2	91	46.821	ENSORLG00000003851	ptcd2	88	46.821	Oryzias_latipes
ENSEASG00005018038	PTCD2	91	46.243	ENSORLG00020009823	ptcd2	90	46.243	Oryzias_latipes_hni
ENSEASG00005018038	PTCD2	92	45.714	ENSORLG00015016777	ptcd2	99	45.714	Oryzias_latipes_hsok
ENSEASG00005018038	PTCD2	91	45.665	ENSOMEG00000012396	ptcd2	84	45.665	Oryzias_melastigma
ENSEASG00005018038	PTCD2	100	73.368	ENSOGAG00000008390	PTCD2	99	73.368	Otolemur_garnettii
ENSEASG00005018038	PTCD2	100	82.552	ENSOARG00000005087	PTCD2	99	82.552	Ovis_aries
ENSEASG00005018038	PTCD2	100	79.373	ENSPPAG00000028480	PTCD2	99	79.373	Pan_paniscus
ENSEASG00005018038	PTCD2	100	78.851	ENSPTRG00000016968	PTCD2	99	78.851	Pan_troglodytes
ENSEASG00005018038	PTCD2	90	82.899	ENSPANG00000006611	PTCD2	89	82.899	Papio_anubis
ENSEASG00005018038	PTCD2	92	47.458	ENSPKIG00000019896	ptcd2	92	47.458	Paramormyrops_kingsleyae
ENSEASG00005018038	PTCD2	84	60.436	ENSPSIG00000014559	PTCD2	99	60.436	Pelodiscus_sinensis
ENSEASG00005018038	PTCD2	100	75.000	ENSPEMG00000000884	Ptcd2	100	75.000	Peromyscus_maniculatus_bairdii
ENSEASG00005018038	PTCD2	93	61.017	ENSPCIG00000029047	PTCD2	92	61.017	Phascolarctos_cinereus
ENSEASG00005018038	PTCD2	93	43.539	ENSPLAG00000010456	ptcd2	96	43.501	Poecilia_latipinna
ENSEASG00005018038	PTCD2	99	43.767	ENSPREG00000021797	ptcd2	93	43.767	Poecilia_reticulata
ENSEASG00005018038	PTCD2	100	69.713	ENSPPYG00000015543	PTCD2	99	69.713	Pongo_abelii
ENSEASG00005018038	PTCD2	77	68.367	ENSPCAG00000006806	PTCD2	94	68.367	Procavia_capensis
ENSEASG00005018038	PTCD2	100	79.896	ENSPVAG00000010935	PTCD2	99	79.896	Pteropus_vampyrus
ENSEASG00005018038	PTCD2	92	45.584	ENSPNYG00000003122	ptcd2	90	45.584	Pundamilia_nyererei
ENSEASG00005018038	PTCD2	93	48.895	ENSPNAG00000021490	ptcd2	94	49.171	Pygocentrus_nattereri
ENSEASG00005018038	PTCD2	100	73.766	ENSRNOG00000028403	Ptcd2	100	73.766	Rattus_norvegicus
ENSEASG00005018038	PTCD2	100	74.935	ENSRBIG00000032929	PTCD2	99	74.935	Rhinopithecus_bieti
ENSEASG00005018038	PTCD2	100	79.634	ENSRROG00000000080	PTCD2	100	79.634	Rhinopithecus_roxellana
ENSEASG00005018038	PTCD2	100	78.590	ENSSBOG00000018911	PTCD2	100	78.590	Saimiri_boliviensis_boliviensis
ENSEASG00005018038	PTCD2	99	58.140	ENSSHAG00000003833	PTCD2	98	58.140	Sarcophilus_harrisii
ENSEASG00005018038	PTCD2	88	47.041	ENSSFOG00015015415	ptcd2	88	47.041	Scleropages_formosus
ENSEASG00005018038	PTCD2	91	44.669	ENSSMAG00000010350	ptcd2	90	44.669	Scophthalmus_maximus
ENSEASG00005018038	PTCD2	99	46.032	ENSSDUG00000008142	ptcd2	92	46.032	Seriola_dumerili
ENSEASG00005018038	PTCD2	99	46.032	ENSSLDG00000015284	ptcd2	96	46.032	Seriola_lalandi_dorsalis
ENSEASG00005018038	PTCD2	81	67.638	ENSSARG00000004983	PTCD2	99	67.638	Sorex_araneus
ENSEASG00005018038	PTCD2	100	50.653	ENSSPUG00000000176	PTCD2	96	50.653	Sphenodon_punctatus
ENSEASG00005018038	PTCD2	95	45.604	ENSSPAG00000008591	ptcd2	92	45.604	Stegastes_partitus
ENSEASG00005018038	PTCD2	100	84.031	ENSSSCG00000016975	PTCD2	90	84.031	Sus_scrofa
ENSEASG00005018038	PTCD2	91	50.289	ENSTGUG00000005705	PTCD2	99	50.289	Taeniopygia_guttata
ENSEASG00005018038	PTCD2	100	75.979	ENSTBEG00000016559	PTCD2	99	75.979	Tupaia_belangeri
ENSEASG00005018038	PTCD2	100	83.333	ENSTTRG00000011851	PTCD2	99	83.333	Tursiops_truncatus
ENSEASG00005018038	PTCD2	100	79.896	ENSUAMG00000007583	PTCD2	90	79.896	Ursus_americanus
ENSEASG00005018038	PTCD2	100	79.896	ENSUMAG00000007666	PTCD2	100	79.896	Ursus_maritimus
ENSEASG00005018038	PTCD2	100	82.292	ENSVPAG00000009597	PTCD2	99	82.292	Vicugna_pacos
ENSEASG00005018038	PTCD2	100	79.896	ENSVVUG00000007299	-	100	79.896	Vulpes_vulpes
ENSEASG00005018038	PTCD2	100	50.000	ENSXETG00000031652	PTCD2	99	50.000	Xenopus_tropicalis
ENSEASG00005018038	PTCD2	93	43.820	ENSXMAG00000005940	ptcd2	87	43.501	Xiphophorus_maculatus