EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005018106 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 126081 bases
Position: chrPSZQ01004855.1:1723492-1849572
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005026560	La	PF05383.17	5.4e-22	1	1
ENSEASP00005026567	La	PF05383.17	9.4e-22	1	1
ENSEASP00005026543	La	PF05383.17	9.7e-22	1	1
ENSEASP00005026540	La	PF05383.17	1.3e-21	1	1
ENSEASP00005026537	La	PF05383.17	1.3e-21	1	1
ENSEASP00005026547	La	PF05383.17	1.9e-21	1	1
ENSEASP00005026550	La	PF05383.17	1.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005028826	LARP1B-204	2495	-	ENSEASP00005026547	780 (aa)	-	-
ENSEAST00005028822	LARP1B-203	2580	-	ENSEASP00005026543	859 (aa)	-	-
ENSEAST00005028819	LARP1B-202	2775	-	ENSEASP00005026540	924 (aa)	-	-
ENSEAST00005028815	LARP1B-201	2778	-	ENSEASP00005026537	925 (aa)	-	-
ENSEAST00005028839	LARP1B-206	1911	-	ENSEASP00005026560	335 (aa)	-	UPI0001FAF751
ENSEAST00005028829	LARP1B-205	2846	-	ENSEASP00005026550	780 (aa)	-	-
ENSEAST00005028846	LARP1B-207	867	-	ENSEASP00005026567	288 (aa)	-	-

Gene Model

Click here to download ENSEASG00005018106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005018106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005018106	LARP1B	99	59.158	ENSEASG00005001070	LARP1	84	58.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005018106	LARP1B	98	94.681	ENSG00000138709	LARP1B	100	96.000	Homo_sapiens
ENSEASG00005018106	LARP1B	99	55.584	ENSAPOG00000020101	larp1b	85	56.852	Acanthochromis_polyacanthus
ENSEASG00005018106	LARP1B	99	95.509	ENSAMEG00000002748	LARP1B	99	95.509	Ailuropoda_melanoleuca
ENSEASG00005018106	LARP1B	99	54.156	ENSACIG00000023890	larp1b	83	55.913	Amphilophus_citrinellus
ENSEASG00005018106	LARP1B	99	55.698	ENSAOCG00000014268	larp1b	83	57.596	Amphiprion_ocellaris
ENSEASG00005018106	LARP1B	99	56.085	ENSAPEG00000004126	larp1b	85	56.558	Amphiprion_percula
ENSEASG00005018106	LARP1B	99	55.181	ENSATEG00000017849	larp1b	86	56.008	Anabas_testudineus
ENSEASG00005018106	LARP1B	99	67.044	ENSAPLG00000010129	LARP1B	98	68.137	Anas_platyrhynchos
ENSEASG00005018106	LARP1B	98	76.203	ENSACAG00000011338	LARP1B	86	77.022	Anolis_carolinensis
ENSEASG00005018106	LARP1B	99	80.422	ENSANAG00000034618	LARP1B	97	80.236	Aotus_nancymaae
ENSEASG00005018106	LARP1B	99	55.652	ENSACLG00000011948	larp1b	85	55.219	Astatotilapia_calliptera
ENSEASG00005018106	LARP1B	98	53.488	ENSAMXG00000006805	larp1b	81	53.837	Astyanax_mexicanus
ENSEASG00005018106	LARP1B	98	93.939	ENSBTAG00000012135	LARP1B	98	91.228	Bos_taurus
ENSEASG00005018106	LARP1B	99	93.114	ENSCJAG00000003338	LARP1B	99	93.114	Callithrix_jacchus
ENSEASG00005018106	LARP1B	98	97.887	ENSCAFG00000003831	LARP1B	100	92.366	Canis_familiaris
ENSEASG00005018106	LARP1B	99	98.258	ENSCAFG00020018899	LARP1B	99	98.258	Canis_lupus_dingo
ENSEASG00005018106	LARP1B	99	94.097	ENSCHIG00000023144	LARP1B	99	94.097	Capra_hircus
ENSEASG00005018106	LARP1B	100	88.889	ENSTSYG00000002037	-	100	88.889	Carlito_syrichta
ENSEASG00005018106	LARP1B	76	96.396	ENSCPOG00000034668	-	93	96.396	Cavia_porcellus
ENSEASG00005018106	LARP1B	100	93.731	ENSCCAG00000021948	LARP1B	100	93.731	Cebus_capucinus
ENSEASG00005018106	LARP1B	99	89.820	ENSCATG00000013541	LARP1B	99	89.820	Cercocebus_atys
ENSEASG00005018106	LARP1B	99	88.623	ENSCLAG00000006448	-	99	88.623	Chinchilla_lanigera
ENSEASG00005018106	LARP1B	98	92.749	ENSCSAG00000003582	LARP1B	100	89.640	Chlorocebus_sabaeus
ENSEASG00005018106	LARP1B	97	83.917	ENSCHOG00000005354	LARP1B	100	81.025	Choloepus_hoffmanni
ENSEASG00005018106	LARP1B	98	77.749	ENSCPBG00000017480	LARP1B	87	75.940	Chrysemys_picta_bellii
ENSEASG00005018106	LARP1B	99	94.774	ENSCANG00000026958	LARP1B	99	94.774	Colobus_angolensis_palliatus
ENSEASG00005018106	LARP1B	99	92.334	ENSCGRG00001004660	-	99	92.334	Cricetulus_griseus_chok1gshd
ENSEASG00005018106	LARP1B	99	91.986	ENSCGRG00000001914	-	99	91.986	Cricetulus_griseus_crigri
ENSEASG00005018106	LARP1B	99	50.854	ENSCSEG00000013519	larp1b	85	53.608	Cynoglossus_semilaevis
ENSEASG00005018106	LARP1B	99	54.871	ENSCVAG00000005046	larp1b	85	55.428	Cyprinodon_variegatus
ENSEASG00005018106	LARP1B	99	53.491	ENSDARG00000061169	larp1b	81	54.062	Danio_rerio
ENSEASG00005018106	LARP1B	98	91.793	ENSDNOG00000018765	-	100	89.432	Dasypus_novemcinctus
ENSEASG00005018106	LARP1B	78	97.170	ENSETEG00000012497	LARP1B	89	82.353	Echinops_telfairi
ENSEASG00005018106	LARP1B	99	47.774	ENSEBUG00000003668	larp1b	87	51.029	Eptatretus_burgeri
ENSEASG00005018106	LARP1B	100	98.268	ENSECAG00000001088	LARP1B	82	98.268	Equus_caballus
ENSEASG00005018106	LARP1B	98	48.454	ENSELUG00000023774	larp1b	72	55.708	Esox_lucius
ENSEASG00005018106	LARP1B	99	95.509	ENSFCAG00000014650	-	99	95.509	Felis_catus
ENSEASG00005018106	LARP1B	100	67.815	ENSFALG00000008098	LARP1B	100	67.922	Ficedula_albicollis
ENSEASG00005018106	LARP1B	99	56.090	ENSFHEG00000010264	larp1b	81	55.932	Fundulus_heteroclitus
ENSEASG00005018106	LARP1B	75	67.910	ENSGMOG00000005207	larp1b	62	63.987	Gadus_morhua
ENSEASG00005018106	LARP1B	98	69.520	ENSGALG00000010207	LARP1B	89	67.742	Gallus_gallus
ENSEASG00005018106	LARP1B	94	57.748	ENSGAFG00000012012	larp1b	98	58.082	Gambusia_affinis
ENSEASG00005018106	LARP1B	99	51.241	ENSGACG00000004609	larp1b	85	53.902	Gasterosteus_aculeatus
ENSEASG00005018106	LARP1B	98	77.951	ENSGAGG00000017209	LARP1B	87	76.073	Gopherus_agassizii
ENSEASG00005018106	LARP1B	99	92.814	ENSGGOG00000015900	LARP1B	99	92.814	Gorilla_gorilla
ENSEASG00005018106	LARP1B	99	55.791	ENSHBUG00000009730	larp1b	84	55.335	Haplochromis_burtoni
ENSEASG00005018106	LARP1B	98	75.076	ENSHGLG00000013922	-	97	75.152	Heterocephalus_glaber_female
ENSEASG00005018106	LARP1B	99	87.285	ENSHGLG00000006728	-	99	87.629	Heterocephalus_glaber_female
ENSEASG00005018106	LARP1B	98	75.076	ENSHGLG00100016491	-	97	75.152	Heterocephalus_glaber_male
ENSEASG00005018106	LARP1B	99	88.153	ENSHGLG00100014041	-	98	85.423	Heterocephalus_glaber_male
ENSEASG00005018106	LARP1B	81	59.524	ENSHCOG00000000918	larp1b	99	60.224	Hippocampus_comes
ENSEASG00005018106	LARP1B	98	54.362	ENSIPUG00000012138	larp1b	80	56.803	Ictalurus_punctatus
ENSEASG00005018106	LARP1B	89	79.070	ENSSTOG00000033183	-	99	79.070	Ictidomys_tridecemlineatus
ENSEASG00005018106	LARP1B	96	75.078	ENSSTOG00000034510	-	87	75.078	Ictidomys_tridecemlineatus
ENSEASG00005018106	LARP1B	99	90.972	ENSSTOG00000008596	-	99	90.972	Ictidomys_tridecemlineatus
ENSEASG00005018106	LARP1B	99	81.269	ENSSTOG00000021917	-	94	82.477	Ictidomys_tridecemlineatus
ENSEASG00005018106	LARP1B	99	89.510	ENSJJAG00000022360	Larp1b	99	89.510	Jaculus_jaculus
ENSEASG00005018106	LARP1B	99	52.612	ENSKMAG00000011589	larp1b	86	54.241	Kryptolebias_marmoratus
ENSEASG00005018106	LARP1B	99	55.941	ENSLBEG00000005655	larp1b	85	56.381	Labrus_bergylta
ENSEASG00005018106	LARP1B	99	72.021	ENSLACG00000015247	LARP1B	100	70.229	Latimeria_chalumnae
ENSEASG00005018106	LARP1B	95	71.842	ENSLOCG00000010684	larp1b	94	65.052	Lepisosteus_oculatus
ENSEASG00005018106	LARP1B	100	94.659	ENSLAFG00000008473	-	100	94.659	Loxodonta_africana
ENSEASG00005018106	LARP1B	99	93.413	ENSMFAG00000002218	LARP1B	99	93.413	Macaca_fascicularis
ENSEASG00005018106	LARP1B	99	68.293	ENSMFAG00000003306	-	92	90.972	Macaca_fascicularis
ENSEASG00005018106	LARP1B	99	93.413	ENSMMUG00000021347	LARP1B	99	93.413	Macaca_mulatta
ENSEASG00005018106	LARP1B	97	82.649	ENSMNEG00000030406	LARP1B	100	88.333	Macaca_nemestrina
ENSEASG00005018106	LARP1B	64	91.549	ENSMNEG00000027747	-	89	91.549	Macaca_nemestrina
ENSEASG00005018106	LARP1B	98	86.448	ENSMLEG00000009306	LARP1B	100	86.448	Mandrillus_leucophaeus
ENSEASG00005018106	LARP1B	99	56.082	ENSMAMG00000000081	larp1b	86	56.276	Mastacembelus_armatus
ENSEASG00005018106	LARP1B	92	52.899	ENSMZEG00005002545	larp1b	98	59.091	Maylandia_zebra
ENSEASG00005018106	LARP1B	98	61.414	ENSMGAG00000004809	LARP1B	98	61.794	Meleagris_gallopavo
ENSEASG00005018106	LARP1B	99	91.289	ENSMAUG00000007879	-	99	91.289	Mesocricetus_auratus
ENSEASG00005018106	LARP1B	98	85.664	ENSMICG00000037883	-	88	85.664	Microcebus_murinus
ENSEASG00005018106	LARP1B	97	69.632	ENSMICG00000028052	-	99	68.775	Microcebus_murinus
ENSEASG00005018106	LARP1B	99	95.210	ENSMICG00000036111	LARP1B	99	95.210	Microcebus_murinus
ENSEASG00005018106	LARP1B	78	92.748	ENSMOCG00000001490	Larp1b	95	92.748	Microtus_ochrogaster
ENSEASG00005018106	LARP1B	98	87.879	ENSMODG00000012300	LARP1B	83	85.363	Monodelphis_domestica
ENSEASG00005018106	LARP1B	99	55.168	ENSMALG00000003638	larp1b	82	57.860	Monopterus_albus
ENSEASG00005018106	LARP1B	99	89.547	MGP_CAROLIEiJ_G0024962	Larp1b	99	89.547	Mus_caroli
ENSEASG00005018106	LARP1B	99	90.941	ENSMUSG00000025762	Larp1b	99	90.941	Mus_musculus
ENSEASG00005018106	LARP1B	99	90.592	MGP_PahariEiJ_G0026403	Larp1b	99	90.592	Mus_pahari
ENSEASG00005018106	LARP1B	99	90.941	MGP_SPRETEiJ_G0025897	Larp1b	99	90.941	Mus_spretus
ENSEASG00005018106	LARP1B	98	96.960	ENSMPUG00000017365	LARP1B	83	91.192	Mustela_putorius_furo
ENSEASG00005018106	LARP1B	98	96.190	ENSMLUG00000010229	LARP1B	97	84.742	Myotis_lucifugus
ENSEASG00005018106	LARP1B	79	58.910	ENSNBRG00000023846	larp1b	80	54.819	Neolamprologus_brichardi
ENSEASG00005018106	LARP1B	99	92.515	ENSNLEG00000013819	LARP1B	99	92.515	Nomascus_leucogenys
ENSEASG00005018106	LARP1B	90	80.952	ENSMEUG00000010308	LARP1B	88	80.952	Notamacropus_eugenii
ENSEASG00005018106	LARP1B	98	74.468	ENSOPRG00000005478	LARP1B	100	70.588	Ochotona_princeps
ENSEASG00005018106	LARP1B	99	88.922	ENSODEG00000001292	-	99	88.922	Octodon_degus
ENSEASG00005018106	LARP1B	99	55.364	ENSONIG00000012386	larp1b	93	56.555	Oreochromis_niloticus
ENSEASG00005018106	LARP1B	98	93.921	ENSOCUG00000013330	LARP1B	100	87.218	Oryctolagus_cuniculus
ENSEASG00005018106	LARP1B	99	54.658	ENSORLG00000017954	larp1b	85	54.916	Oryzias_latipes
ENSEASG00005018106	LARP1B	99	54.783	ENSORLG00020013081	larp1b	85	54.812	Oryzias_latipes_hni
ENSEASG00005018106	LARP1B	99	55.556	ENSORLG00015009580	larp1b	85	55.451	Oryzias_latipes_hsok
ENSEASG00005018106	LARP1B	99	55.069	ENSOMEG00000004210	larp1b	85	55.252	Oryzias_melastigma
ENSEASG00005018106	LARP1B	98	92.121	ENSOGAG00000005771	LARP1B	98	89.257	Otolemur_garnettii
ENSEASG00005018106	LARP1B	98	93.636	ENSOARG00000015300	LARP1B	100	90.066	Ovis_aries
ENSEASG00005018106	LARP1B	99	92.515	ENSPPAG00000030439	LARP1B	99	92.515	Pan_paniscus
ENSEASG00005018106	LARP1B	99	95.509	ENSPPRG00000002743	-	99	95.509	Panthera_pardus
ENSEASG00005018106	LARP1B	99	95.509	ENSPTIG00000011225	LARP1B	99	95.509	Panthera_tigris_altaica
ENSEASG00005018106	LARP1B	99	92.216	ENSPTRG00000016437	LARP1B	99	92.216	Pan_troglodytes
ENSEASG00005018106	LARP1B	99	93.114	ENSPANG00000012488	LARP1B	99	93.114	Papio_anubis
ENSEASG00005018106	LARP1B	97	54.895	ENSPKIG00000014360	larp1b	88	52.295	Paramormyrops_kingsleyae
ENSEASG00005018106	LARP1B	99	77.003	ENSPSIG00000012885	LARP1B	93	77.816	Pelodiscus_sinensis
ENSEASG00005018106	LARP1B	81	61.669	ENSPMGG00000007207	larp1b	91	58.965	Periophthalmus_magnuspinnatus
ENSEASG00005018106	LARP1B	96	44.606	ENSPMAG00000002700	larp1b	94	54.037	Petromyzon_marinus
ENSEASG00005018106	LARP1B	99	85.417	ENSPCIG00000026516	LARP1B	100	84.808	Phascolarctos_cinereus
ENSEASG00005018106	LARP1B	99	55.676	ENSPFOG00000019519	larp1b	85	55.556	Poecilia_formosa
ENSEASG00005018106	LARP1B	96	52.408	ENSPFOG00000022837	-	78	52.206	Poecilia_formosa
ENSEASG00005018106	LARP1B	99	57.357	ENSPLAG00000007115	larp1b	85	56.859	Poecilia_latipinna
ENSEASG00005018106	LARP1B	100	56.128	ENSPMEG00000001224	larp1b	85	56.649	Poecilia_mexicana
ENSEASG00005018106	LARP1B	77	62.222	ENSPREG00000005955	-	96	53.770	Poecilia_reticulata
ENSEASG00005018106	LARP1B	98	89.362	ENSPCAG00000007546	LARP1B	100	85.699	Procavia_capensis
ENSEASG00005018106	LARP1B	99	94.611	ENSPCOG00000021874	LARP1B	99	94.611	Propithecus_coquereli
ENSEASG00005018106	LARP1B	99	88.687	ENSPVAG00000005373	LARP1B	100	84.498	Pteropus_vampyrus
ENSEASG00005018106	LARP1B	79	64.380	ENSPNYG00000017357	larp1b	98	59.673	Pundamilia_nyererei
ENSEASG00005018106	LARP1B	97	53.898	ENSPNAG00000008823	larp1b	83	56.439	Pygocentrus_nattereri
ENSEASG00005018106	LARP1B	99	91.317	ENSRNOG00000038366	Larp1b	99	91.317	Rattus_norvegicus
ENSEASG00005018106	LARP1B	99	83.533	ENSRBIG00000038568	-	91	83.533	Rhinopithecus_bieti
ENSEASG00005018106	LARP1B	99	91.018	ENSRBIG00000039982	-	99	91.018	Rhinopithecus_bieti
ENSEASG00005018106	LARP1B	99	93.413	ENSRROG00000030771	LARP1B	99	93.413	Rhinopithecus_roxellana
ENSEASG00005018106	LARP1B	99	85.764	ENSRROG00000038525	-	96	85.764	Rhinopithecus_roxellana
ENSEASG00005018106	LARP1B	98	88.788	ENSSHAG00000014474	LARP1B	99	85.157	Sarcophilus_harrisii
ENSEASG00005018106	LARP1B	99	55.049	ENSSMAG00000006347	larp1b	91	55.567	Scophthalmus_maximus
ENSEASG00005018106	LARP1B	99	55.670	ENSSDUG00000004182	larp1b	81	57.158	Seriola_dumerili
ENSEASG00005018106	LARP1B	97	47.143	ENSSLDG00000014613	larp1b	74	58.816	Seriola_lalandi_dorsalis
ENSEASG00005018106	LARP1B	98	73.716	ENSSPUG00000011837	LARP1B	99	66.224	Sphenodon_punctatus
ENSEASG00005018106	LARP1B	99	55.707	ENSSPAG00000017772	larp1b	86	55.901	Stegastes_partitus
ENSEASG00005018106	LARP1B	100	57.292	ENSSSCG00000040491	-	100	65.899	Sus_scrofa
ENSEASG00005018106	LARP1B	98	94.833	ENSSSCG00000034280	LARP1B	99	93.814	Sus_scrofa
ENSEASG00005018106	LARP1B	93	69.776	ENSTGUG00000002098	-	98	66.587	Taeniopygia_guttata
ENSEASG00005018106	LARP1B	99	52.637	ENSTRUG00000005612	larp1b	85	54.154	Takifugu_rubripes
ENSEASG00005018106	LARP1B	98	53.710	ENSTNIG00000012398	larp1b	94	54.915	Tetraodon_nigroviridis
ENSEASG00005018106	LARP1B	90	86.667	ENSTBEG00000004177	LARP1B	88	86.667	Tupaia_belangeri
ENSEASG00005018106	LARP1B	99	81.352	ENSTTRG00000012984	LARP1B	100	81.352	Tursiops_truncatus
ENSEASG00005018106	LARP1B	99	84.731	ENSUAMG00000016938	-	90	98.810	Ursus_americanus
ENSEASG00005018106	LARP1B	98	94.833	ENSUMAG00000007373	LARP1B	100	91.085	Ursus_maritimus
ENSEASG00005018106	LARP1B	98	80.308	ENSVPAG00000007223	LARP1B	100	80.308	Vicugna_pacos
ENSEASG00005018106	LARP1B	98	96.657	ENSVVUG00000011307	LARP1B	100	94.118	Vulpes_vulpes
ENSEASG00005018106	LARP1B	99	60.280	ENSXETG00000022512	larp1b	89	60.280	Xenopus_tropicalis
ENSEASG00005018106	LARP1B	76	61.237	ENSXCOG00000004435	larp1b	73	59.541	Xiphophorus_couchianus
ENSEASG00005018106	LARP1B	99	56.506	ENSXMAG00000008150	larp1b	85	56.211	Xiphophorus_maculatus