EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005018272 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 12593 bases
Position: chrPSZQ01004146.1:517196-529788
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005026791	KH_1	PF00013.29	2.9e-07	1	1
ENSEASP00005026791	zf-CCHC	PF00098.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005029086	SF1-201	1647	-	ENSEASP00005026791	548 (aa)	-	-

Gene Model

Click here to download ENSEASG00005018272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005018272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005018272	SF1	69	80.928	ENSAPOG00000012341	sf1	60	76.047	Acanthochromis_polyacanthus
ENSEASG00005018272	SF1	95	99.040	ENSAMEG00000017828	SF1	81	99.040	Ailuropoda_melanoleuca
ENSEASG00005018272	SF1	69	80.412	ENSAOCG00000010934	sf1	61	76.112	Amphiprion_ocellaris
ENSEASG00005018272	SF1	69	80.412	ENSAPEG00000009498	sf1	61	76.112	Amphiprion_percula
ENSEASG00005018272	SF1	99	99.074	ENSANAG00000026664	-	96	99.263	Aotus_nancymaae
ENSEASG00005018272	SF1	94	85.853	ENSANAG00000022607	-	88	88.493	Aotus_nancymaae
ENSEASG00005018272	SF1	67	84.553	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSEASG00005018272	SF1	67	85.561	ENSAMXG00000003630	sf1	50	78.729	Astyanax_mexicanus
ENSEASG00005018272	SF1	97	99.244	ENSBTAG00000001035	SF1	83	99.244	Bos_taurus
ENSEASG00005018272	SF1	98	99.628	ENSCJAG00000002780	SF1	83	99.244	Callithrix_jacchus
ENSEASG00005018272	SF1	97	99.244	ENSCAFG00000014239	SF1	83	99.244	Canis_familiaris
ENSEASG00005018272	SF1	97	99.244	ENSCAFG00020014381	SF1	83	99.244	Canis_lupus_dingo
ENSEASG00005018272	SF1	100	99.635	ENSCHIG00000025867	SF1	100	99.635	Capra_hircus
ENSEASG00005018272	SF1	56	98.566	ENSTSYG00000033618	SF1	82	98.566	Carlito_syrichta
ENSEASG00005018272	SF1	80	98.182	ENSCAPG00000010762	SF1	79	98.182	Cavia_aperea
ENSEASG00005018272	SF1	98	99.255	ENSCPOG00000012290	SF1	100	99.255	Cavia_porcellus
ENSEASG00005018272	SF1	96	84.630	ENSCCAG00000023781	-	90	87.446	Cebus_capucinus
ENSEASG00005018272	SF1	98	99.628	ENSCCAG00000037881	SF1	96	99.509	Cebus_capucinus
ENSEASG00005018272	SF1	97	99.244	ENSCATG00000011564	SF1	95	98.526	Cercocebus_atys
ENSEASG00005018272	SF1	100	99.635	ENSCSAG00000007258	SF1	100	99.635	Chlorocebus_sabaeus
ENSEASG00005018272	SF1	75	93.204	ENSCHOG00000006008	SF1	79	93.301	Choloepus_hoffmanni
ENSEASG00005018272	SF1	94	86.267	ENSCPBG00000023763	SF1	66	84.913	Chrysemys_picta_bellii
ENSEASG00005018272	SF1	69	57.853	ENSCING00000005564	-	74	60.106	Ciona_intestinalis
ENSEASG00005018272	SF1	93	53.179	ENSCSAVG00000009055	-	56	66.361	Ciona_savignyi
ENSEASG00005018272	SF1	97	99.244	ENSCANG00000042201	SF1	91	99.472	Colobus_angolensis_palliatus
ENSEASG00005018272	SF1	97	98.677	ENSCGRG00001003677	Sf1	83	98.677	Cricetulus_griseus_chok1gshd
ENSEASG00005018272	SF1	98	98.883	ENSCGRG00000001708	Sf1	99	98.883	Cricetulus_griseus_crigri
ENSEASG00005018272	SF1	68	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSEASG00005018272	SF1	71	80.407	ENSDARG00000008188	sf1	72	78.322	Danio_rerio
ENSEASG00005018272	SF1	100	99.088	ENSDNOG00000001282	SF1	100	99.088	Dasypus_novemcinctus
ENSEASG00005018272	SF1	97	99.244	ENSDORG00000016334	Sf1	83	99.244	Dipodomys_ordii
ENSEASG00005018272	SF1	95	90.927	ENSETEG00000012830	SF1	72	90.927	Echinops_telfairi
ENSEASG00005018272	SF1	100	99.818	ENSECAG00000024544	SF1	100	99.818	Equus_caballus
ENSEASG00005018272	SF1	72	98.728	ENSEEUG00000001058	SF1	100	98.728	Erinaceus_europaeus
ENSEASG00005018272	SF1	67	81.167	ENSELUG00000013225	sf1	54	77.990	Esox_lucius
ENSEASG00005018272	SF1	98	99.628	ENSFCAG00000012231	SF1	83	99.244	Felis_catus
ENSEASG00005018272	SF1	94	96.318	ENSFDAG00000009833	SF1	79	98.636	Fukomys_damarensis
ENSEASG00005018272	SF1	69	80.155	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSEASG00005018272	SF1	60	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSEASG00005018272	SF1	69	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSEASG00005018272	SF1	70	80.506	ENSGACG00000000826	sf1	68	76.485	Gasterosteus_aculeatus
ENSEASG00005018272	SF1	83	88.571	ENSGAGG00000021691	SF1	72	84.913	Gopherus_agassizii
ENSEASG00005018272	SF1	97	99.244	ENSHGLG00000009541	SF1	83	99.244	Heterocephalus_glaber_female
ENSEASG00005018272	SF1	90	96.545	ENSHGLG00100013879	-	93	96.177	Heterocephalus_glaber_male
ENSEASG00005018272	SF1	79	88.966	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSEASG00005018272	SF1	84	86.345	ENSHGLG00100008255	-	94	85.924	Heterocephalus_glaber_male
ENSEASG00005018272	SF1	69	81.088	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSEASG00005018272	SF1	95	99.228	ENSSTOG00000009790	-	83	99.228	Ictidomys_tridecemlineatus
ENSEASG00005018272	SF1	94	88.781	ENSSTOG00000024353	-	77	88.781	Ictidomys_tridecemlineatus
ENSEASG00005018272	SF1	97	99.055	ENSJJAG00000011788	Sf1	83	99.055	Jaculus_jaculus
ENSEASG00005018272	SF1	68	82.461	ENSLBEG00000019836	sf1	52	86.053	Labrus_bergylta
ENSEASG00005018272	SF1	76	77.857	ENSLACG00000018493	SF1	74	78.072	Latimeria_chalumnae
ENSEASG00005018272	SF1	68	84.350	ENSLOCG00000002130	sf1	59	79.557	Lepisosteus_oculatus
ENSEASG00005018272	SF1	95	98.848	ENSLAFG00000007201	SF1	81	98.848	Loxodonta_africana
ENSEASG00005018272	SF1	97	99.244	ENSMFAG00000033122	SF1	94	98.526	Macaca_fascicularis
ENSEASG00005018272	SF1	100	99.635	ENSMMUG00000022606	SF1	100	99.635	Macaca_mulatta
ENSEASG00005018272	SF1	98	98.711	ENSMNEG00000037901	SF1	94	98.526	Macaca_nemestrina
ENSEASG00005018272	SF1	95	99.229	ENSMLEG00000040706	SF1	94	98.526	Mandrillus_leucophaeus
ENSEASG00005018272	SF1	97	98.677	ENSMAUG00000014064	Sf1	83	98.677	Mesocricetus_auratus
ENSEASG00005018272	SF1	98	99.628	ENSMICG00000001202	SF1	96	99.265	Microcebus_murinus
ENSEASG00005018272	SF1	97	98.488	ENSMOCG00000022038	Sf1	83	98.488	Microtus_ochrogaster
ENSEASG00005018272	SF1	67	81.989	ENSMMOG00000020474	sf1	60	76.642	Mola_mola
ENSEASG00005018272	SF1	82	93.960	ENSMODG00000029407	SF1	97	93.960	Monodelphis_domestica
ENSEASG00005018272	SF1	68	82.888	ENSMALG00000020521	sf1	68	76.359	Monopterus_albus
ENSEASG00005018272	SF1	100	99.088	MGP_CAROLIEiJ_G0022607	Sf1	100	99.251	Mus_caroli
ENSEASG00005018272	SF1	100	99.088	ENSMUSG00000024949	Sf1	100	99.251	Mus_musculus
ENSEASG00005018272	SF1	100	99.088	MGP_PahariEiJ_G0014101	Sf1	100	99.251	Mus_pahari
ENSEASG00005018272	SF1	100	99.088	MGP_SPRETEiJ_G0023518	Sf1	100	99.251	Mus_spretus
ENSEASG00005018272	SF1	95	99.040	ENSMPUG00000012684	SF1	82	99.040	Mustela_putorius_furo
ENSEASG00005018272	SF1	83	94.092	ENSMLUG00000029800	-	78	94.493	Myotis_lucifugus
ENSEASG00005018272	SF1	95	98.848	ENSMLUG00000015217	-	82	98.848	Myotis_lucifugus
ENSEASG00005018272	SF1	97	99.055	ENSNGAG00000005550	Sf1	83	99.055	Nannospalax_galili
ENSEASG00005018272	SF1	68	83.957	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSEASG00005018272	SF1	96	99.620	ENSNLEG00000005236	-	91	99.472	Nomascus_leucogenys
ENSEASG00005018272	SF1	97	98.117	ENSMEUG00000013424	SF1	100	98.117	Notamacropus_eugenii
ENSEASG00005018272	SF1	90	98.990	ENSOPRG00000005008	SF1	100	98.990	Ochotona_princeps
ENSEASG00005018272	SF1	85	97.216	ENSODEG00000006102	-	81	89.414	Octodon_degus
ENSEASG00005018272	SF1	74	86.207	ENSOANG00000002909	SF1	96	87.212	Ornithorhynchus_anatinus
ENSEASG00005018272	SF1	95	99.040	ENSOCUG00000026486	SF1	83	99.040	Oryctolagus_cuniculus
ENSEASG00005018272	SF1	70	80.563	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSEASG00005018272	SF1	71	79.250	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSEASG00005018272	SF1	68	80.105	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSEASG00005018272	SF1	97	99.244	ENSOGAG00000016196	SF1	83	99.244	Otolemur_garnettii
ENSEASG00005018272	SF1	96	94.937	ENSOARG00000009166	SF1	97	94.937	Ovis_aries
ENSEASG00005018272	SF1	92	99.205	ENSPPAG00000002799	-	96	99.002	Pan_paniscus
ENSEASG00005018272	SF1	98	99.628	ENSPPRG00000013566	SF1	82	99.205	Panthera_pardus
ENSEASG00005018272	SF1	82	97.987	ENSPTIG00000016141	SF1	80	97.987	Panthera_tigris_altaica
ENSEASG00005018272	SF1	98	99.628	ENSPTRG00000003846	SF1	99	99.531	Pan_troglodytes
ENSEASG00005018272	SF1	100	99.635	ENSPANG00000020754	SF1	100	99.635	Papio_anubis
ENSEASG00005018272	SF1	60	79.279	ENSPKIG00000012116	sf1	88	74.212	Paramormyrops_kingsleyae
ENSEASG00005018272	SF1	64	86.610	ENSPSIG00000003610	SF1	81	80.964	Pelodiscus_sinensis
ENSEASG00005018272	SF1	97	98.677	ENSPEMG00000010463	Sf1	83	98.677	Peromyscus_maniculatus_bairdii
ENSEASG00005018272	SF1	64	69.429	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSEASG00005018272	SF1	97	97.921	ENSPCIG00000018173	SF1	83	97.921	Phascolarctos_cinereus
ENSEASG00005018272	SF1	69	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSEASG00005018272	SF1	67	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSEASG00005018272	SF1	67	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSEASG00005018272	SF1	68	82.940	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSEASG00005018272	SF1	97	99.244	ENSPPYG00000003098	-	99	99.620	Pongo_abelii
ENSEASG00005018272	SF1	98	98.885	ENSPCAG00000013631	SF1	80	98.885	Procavia_capensis
ENSEASG00005018272	SF1	97	99.244	ENSPCOG00000027546	SF1	96	99.265	Propithecus_coquereli
ENSEASG00005018272	SF1	98	99.071	ENSPVAG00000016938	SF1	81	99.071	Pteropus_vampyrus
ENSEASG00005018272	SF1	68	84.921	ENSPNAG00000013072	sf1	59	78.125	Pygocentrus_nattereri
ENSEASG00005018272	SF1	97	98.677	ENSRNOG00000021085	Sf1	97	96.502	Rattus_norvegicus
ENSEASG00005018272	SF1	90	99.389	ENSRBIG00000042818	SF1	92	99.215	Rhinopithecus_bieti
ENSEASG00005018272	SF1	95	99.617	ENSRROG00000045655	SF1	100	99.617	Rhinopithecus_roxellana
ENSEASG00005018272	SF1	53	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSEASG00005018272	SF1	86	83.617	ENSSBOG00000022267	-	99	81.490	Saimiri_boliviensis_boliviensis
ENSEASG00005018272	SF1	74	91.463	ENSSHAG00000006841	SF1	75	92.683	Sarcophilus_harrisii
ENSEASG00005018272	SF1	72	79.950	ENSSFOG00015021978	sf1	55	76.570	Scleropages_formosus
ENSEASG00005018272	SF1	75	76.347	ENSSMAG00000007549	sf1	63	76.761	Scophthalmus_maximus
ENSEASG00005018272	SF1	94	95.358	ENSSARG00000008180	SF1	100	95.358	Sorex_araneus
ENSEASG00005018272	SF1	80	84.967	ENSSPUG00000012907	SF1	86	80.998	Sphenodon_punctatus
ENSEASG00005018272	SF1	69	80.412	ENSSPAG00000019060	sf1	61	76.112	Stegastes_partitus
ENSEASG00005018272	SF1	100	99.453	ENSSSCG00000013021	SF1	100	99.453	Sus_scrofa
ENSEASG00005018272	SF1	97	61.510	ENSTNIG00000004820	sf1	80	69.321	Tetraodon_nigroviridis
ENSEASG00005018272	SF1	84	92.140	ENSTBEG00000013133	SF1	66	92.105	Tupaia_belangeri
ENSEASG00005018272	SF1	98	95.345	ENSTTRG00000008857	SF1	100	95.345	Tursiops_truncatus
ENSEASG00005018272	SF1	75	95.874	ENSUAMG00000011977	SF1	79	95.411	Ursus_americanus
ENSEASG00005018272	SF1	84	99.565	ENSUMAG00000007268	SF1	88	99.564	Ursus_maritimus
ENSEASG00005018272	SF1	65	99.598	ENSVPAG00000011912	SF1	66	99.598	Vicugna_pacos
ENSEASG00005018272	SF1	100	99.635	ENSVVUG00000028585	SF1	100	99.635	Vulpes_vulpes
ENSEASG00005018272	SF1	86	75.210	ENSXETG00000008434	sf1	68	81.311	Xenopus_tropicalis
ENSEASG00005018272	SF1	67	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSEASG00005018272	SF1	68	83.377	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus