EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005018421 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 2804 bases
Position: chrPSZQ01004526.1:693648-696451
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005027045	PseudoU_synth_2	PF00849.22	9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005029355	RPUSD1-201	1335	-	ENSEASP00005027045	418 (aa)	-	-

Gene Model

Click here to download ENSEASG00005018421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005018421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005018421	RPUSD1	75	86.032	ENSG00000007376	RPUSD1	100	91.071	Homo_sapiens
ENSEASG00005018421	RPUSD1	74	56.051	ENSAPOG00000022221	rpusd1	98	56.369	Acanthochromis_polyacanthus
ENSEASG00005018421	RPUSD1	76	83.544	ENSAMEG00000007461	RPUSD1	100	82.911	Ailuropoda_melanoleuca
ENSEASG00005018421	RPUSD1	74	57.643	ENSACIG00000015863	rpusd1	99	57.643	Amphilophus_citrinellus
ENSEASG00005018421	RPUSD1	74	56.634	ENSAOCG00000021975	rpusd1	95	56.731	Amphiprion_ocellaris
ENSEASG00005018421	RPUSD1	74	56.311	ENSAPEG00000001316	rpusd1	95	56.410	Amphiprion_percula
ENSEASG00005018421	RPUSD1	57	67.782	ENSATEG00000002984	rpusd1	98	57.282	Anabas_testudineus
ENSEASG00005018421	RPUSD1	60	59.363	ENSAPLG00000012316	RPUSD1	99	58.566	Anas_platyrhynchos
ENSEASG00005018421	RPUSD1	74	67.742	ENSACAG00000008953	RPUSD1	100	66.349	Anolis_carolinensis
ENSEASG00005018421	RPUSD1	75	85.079	ENSANAG00000024709	RPUSD1	99	85.079	Aotus_nancymaae
ENSEASG00005018421	RPUSD1	61	67.059	ENSACLG00000013692	rpusd1	99	58.842	Astatotilapia_calliptera
ENSEASG00005018421	RPUSD1	75	57.508	ENSAMXG00000019802	rpusd1	100	57.827	Astyanax_mexicanus
ENSEASG00005018421	RPUSD1	76	86.709	ENSBTAG00000000179	RPUSD1	100	85.759	Bos_taurus
ENSEASG00005018421	RPUSD1	75	85.397	ENSCJAG00000012253	RPUSD1	99	84.127	Callithrix_jacchus
ENSEASG00005018421	RPUSD1	76	84.810	ENSCAFG00000019614	RPUSD1	100	84.810	Canis_familiaris
ENSEASG00005018421	RPUSD1	76	84.810	ENSCAFG00020008891	RPUSD1	100	84.810	Canis_lupus_dingo
ENSEASG00005018421	RPUSD1	76	86.392	ENSCHIG00000012872	RPUSD1	100	85.443	Capra_hircus
ENSEASG00005018421	RPUSD1	75	84.444	ENSTSYG00000036934	RPUSD1	99	83.492	Carlito_syrichta
ENSEASG00005018421	RPUSD1	76	84.494	ENSCAPG00000014219	RPUSD1	100	82.911	Cavia_aperea
ENSEASG00005018421	RPUSD1	76	84.494	ENSCPOG00000034604	RPUSD1	100	82.911	Cavia_porcellus
ENSEASG00005018421	RPUSD1	75	86.349	ENSCCAG00000034385	RPUSD1	99	85.079	Cebus_capucinus
ENSEASG00005018421	RPUSD1	75	86.667	ENSCATG00000042983	RPUSD1	99	85.079	Cercocebus_atys
ENSEASG00005018421	RPUSD1	76	83.544	ENSCLAG00000013966	RPUSD1	100	83.228	Chinchilla_lanigera
ENSEASG00005018421	RPUSD1	75	86.667	ENSCSAG00000012121	RPUSD1	99	85.079	Chlorocebus_sabaeus
ENSEASG00005018421	RPUSD1	75	64.423	ENSCPBG00000021101	RPUSD1	99	63.125	Chrysemys_picta_bellii
ENSEASG00005018421	RPUSD1	67	88.612	ENSCANG00000028576	RPUSD1	97	89.377	Colobus_angolensis_palliatus
ENSEASG00005018421	RPUSD1	76	81.646	ENSCGRG00001014253	Rpusd1	100	80.063	Cricetulus_griseus_chok1gshd
ENSEASG00005018421	RPUSD1	76	81.646	ENSCGRG00000017995	Rpusd1	100	80.063	Cricetulus_griseus_crigri
ENSEASG00005018421	RPUSD1	75	55.696	ENSCSEG00000018512	rpusd1	100	55.696	Cynoglossus_semilaevis
ENSEASG00005018421	RPUSD1	74	55.987	ENSCVAG00000022746	rpusd1	98	55.987	Cyprinodon_variegatus
ENSEASG00005018421	RPUSD1	75	60.383	ENSDARG00000060192	rpusd1	100	60.191	Danio_rerio
ENSEASG00005018421	RPUSD1	76	82.595	ENSDNOG00000003721	RPUSD1	100	80.124	Dasypus_novemcinctus
ENSEASG00005018421	RPUSD1	76	85.127	ENSDORG00000026656	Rpusd1	100	85.127	Dipodomys_ordii
ENSEASG00005018421	RPUSD1	75	45.921	ENSEBUG00000008767	rpusd1	94	45.122	Eptatretus_burgeri
ENSEASG00005018421	RPUSD1	85	98.876	ENSECAG00000039586	-	51	81.416	Equus_caballus
ENSEASG00005018421	RPUSD1	63	57.303	ENSELUG00000014307	rpusd1	92	50.920	Esox_lucius
ENSEASG00005018421	RPUSD1	76	83.544	ENSFCAG00000010359	RPUSD1	100	83.228	Felis_catus
ENSEASG00005018421	RPUSD1	75	64.217	ENSFALG00000003211	RPUSD1	100	64.217	Ficedula_albicollis
ENSEASG00005018421	RPUSD1	76	84.810	ENSFDAG00000013398	RPUSD1	100	83.544	Fukomys_damarensis
ENSEASG00005018421	RPUSD1	74	55.340	ENSFHEG00000004736	rpusd1	98	55.663	Fundulus_heteroclitus
ENSEASG00005018421	RPUSD1	74	54.984	ENSGMOG00000010756	rpusd1	99	54.984	Gadus_morhua
ENSEASG00005018421	RPUSD1	75	66.134	ENSGALG00000005315	RPUSD1	100	65.495	Gallus_gallus
ENSEASG00005018421	RPUSD1	74	56.634	ENSGAFG00000009886	rpusd1	98	56.311	Gambusia_affinis
ENSEASG00005018421	RPUSD1	60	65.339	ENSGACG00000014276	rpusd1	97	57.329	Gasterosteus_aculeatus
ENSEASG00005018421	RPUSD1	75	64.744	ENSGAGG00000004181	RPUSD1	99	62.187	Gopherus_agassizii
ENSEASG00005018421	RPUSD1	75	85.714	ENSGGOG00000013997	RPUSD1	99	84.444	Gorilla_gorilla
ENSEASG00005018421	RPUSD1	61	66.667	ENSHBUG00000023728	rpusd1	99	58.521	Haplochromis_burtoni
ENSEASG00005018421	RPUSD1	76	83.544	ENSHGLG00000002595	RPUSD1	100	83.544	Heterocephalus_glaber_female
ENSEASG00005018421	RPUSD1	76	83.544	ENSHGLG00100014303	RPUSD1	100	83.544	Heterocephalus_glaber_male
ENSEASG00005018421	RPUSD1	74	56.774	ENSHCOG00000002390	rpusd1	99	56.774	Hippocampus_comes
ENSEASG00005018421	RPUSD1	75	60.577	ENSIPUG00000001570	rpusd1	99	60.577	Ictalurus_punctatus
ENSEASG00005018421	RPUSD1	76	85.759	ENSSTOG00000004276	RPUSD1	100	84.494	Ictidomys_tridecemlineatus
ENSEASG00005018421	RPUSD1	76	83.861	ENSJJAG00000015696	Rpusd1	100	83.544	Jaculus_jaculus
ENSEASG00005018421	RPUSD1	74	55.911	ENSKMAG00000017287	rpusd1	98	56.958	Kryptolebias_marmoratus
ENSEASG00005018421	RPUSD1	74	55.987	ENSLBEG00000022502	rpusd1	98	56.311	Labrus_bergylta
ENSEASG00005018421	RPUSD1	74	55.987	ENSLBEG00000013354	RPUSD1	98	56.311	Labrus_bergylta
ENSEASG00005018421	RPUSD1	75	61.538	ENSLACG00000008869	RPUSD1	99	60.256	Latimeria_chalumnae
ENSEASG00005018421	RPUSD1	52	74.194	ENSLOCG00000005682	rpusd1	99	74.194	Lepisosteus_oculatus
ENSEASG00005018421	RPUSD1	75	81.587	ENSLAFG00000002115	RPUSD1	99	81.270	Loxodonta_africana
ENSEASG00005018421	RPUSD1	75	86.984	ENSMFAG00000003961	RPUSD1	99	85.397	Macaca_fascicularis
ENSEASG00005018421	RPUSD1	75	86.984	ENSMMUG00000000842	RPUSD1	99	85.397	Macaca_mulatta
ENSEASG00005018421	RPUSD1	75	86.984	ENSMNEG00000042712	RPUSD1	99	85.397	Macaca_nemestrina
ENSEASG00005018421	RPUSD1	75	86.984	ENSMLEG00000030591	RPUSD1	99	85.397	Mandrillus_leucophaeus
ENSEASG00005018421	RPUSD1	61	65.613	ENSMAMG00000004735	rpusd1	98	58.013	Mastacembelus_armatus
ENSEASG00005018421	RPUSD1	61	67.059	ENSMZEG00005003214	rpusd1	99	58.842	Maylandia_zebra
ENSEASG00005018421	RPUSD1	73	65.359	ENSMGAG00000005447	RPUSD1	99	64.706	Meleagris_gallopavo
ENSEASG00005018421	RPUSD1	63	78.244	ENSMAUG00000019998	Rpusd1	100	78.244	Mesocricetus_auratus
ENSEASG00005018421	RPUSD1	76	86.392	ENSMICG00000017561	RPUSD1	100	84.810	Microcebus_murinus
ENSEASG00005018421	RPUSD1	75	83.492	ENSMOCG00000014082	Rpusd1	99	82.857	Microtus_ochrogaster
ENSEASG00005018421	RPUSD1	59	66.122	ENSMMOG00000012569	rpusd1	90	66.122	Mola_mola
ENSEASG00005018421	RPUSD1	76	67.188	ENSMODG00000016882	RPUSD1	100	66.875	Monodelphis_domestica
ENSEASG00005018421	RPUSD1	74	56.958	ENSMALG00000017818	rpusd1	98	57.051	Monopterus_albus
ENSEASG00005018421	RPUSD1	76	82.911	MGP_CAROLIEiJ_G0021244	Rpusd1	100	82.595	Mus_caroli
ENSEASG00005018421	RPUSD1	76	83.228	ENSMUSG00000041199	Rpusd1	100	82.911	Mus_musculus
ENSEASG00005018421	RPUSD1	76	81.447	MGP_PahariEiJ_G0023562	Rpusd1	99	81.905	Mus_pahari
ENSEASG00005018421	RPUSD1	76	83.228	MGP_SPRETEiJ_G0022155	Rpusd1	100	82.911	Mus_spretus
ENSEASG00005018421	RPUSD1	76	81.646	ENSMPUG00000015897	RPUSD1	100	82.595	Mustela_putorius_furo
ENSEASG00005018421	RPUSD1	76	86.076	ENSMLUG00000001089	RPUSD1	100	84.494	Myotis_lucifugus
ENSEASG00005018421	RPUSD1	76	83.544	ENSNGAG00000003595	Rpusd1	100	82.911	Nannospalax_galili
ENSEASG00005018421	RPUSD1	60	67.068	ENSNBRG00000006457	rpusd1	99	58.013	Neolamprologus_brichardi
ENSEASG00005018421	RPUSD1	76	68.987	ENSMEUG00000016049	RPUSD1	100	68.038	Notamacropus_eugenii
ENSEASG00005018421	RPUSD1	76	74.367	ENSOPRG00000008340	RPUSD1	100	73.734	Ochotona_princeps
ENSEASG00005018421	RPUSD1	76	82.911	ENSODEG00000016945	RPUSD1	100	81.646	Octodon_degus
ENSEASG00005018421	RPUSD1	61	65.882	ENSONIG00000015672	rpusd1	99	57.878	Oreochromis_niloticus
ENSEASG00005018421	RPUSD1	75	57.372	ENSORLG00000013009	rpusd1	99	57.372	Oryzias_latipes
ENSEASG00005018421	RPUSD1	75	57.051	ENSORLG00020010382	rpusd1	99	57.051	Oryzias_latipes_hni
ENSEASG00005018421	RPUSD1	75	56.410	ENSORLG00015021354	rpusd1	99	56.410	Oryzias_latipes_hsok
ENSEASG00005018421	RPUSD1	74	57.282	ENSOMEG00000021426	rpusd1	98	56.958	Oryzias_melastigma
ENSEASG00005018421	RPUSD1	76	86.392	ENSOGAG00000003795	RPUSD1	100	86.392	Otolemur_garnettii
ENSEASG00005018421	RPUSD1	76	85.759	ENSOARG00000014254	RPUSD1	100	85.127	Ovis_aries
ENSEASG00005018421	RPUSD1	75	85.714	ENSPPAG00000034797	RPUSD1	99	84.444	Pan_paniscus
ENSEASG00005018421	RPUSD1	76	83.228	ENSPPRG00000012389	RPUSD1	100	82.445	Panthera_pardus
ENSEASG00005018421	RPUSD1	78	81.902	ENSPTIG00000008545	RPUSD1	95	81.155	Panthera_tigris_altaica
ENSEASG00005018421	RPUSD1	75	85.714	ENSPTRG00000007565	RPUSD1	99	84.444	Pan_troglodytes
ENSEASG00005018421	RPUSD1	75	86.349	ENSPANG00000024401	RPUSD1	99	84.762	Papio_anubis
ENSEASG00005018421	RPUSD1	75	59.873	ENSPKIG00000018890	rpusd1	91	57.812	Paramormyrops_kingsleyae
ENSEASG00005018421	RPUSD1	75	65.815	ENSPSIG00000013945	RPUSD1	100	65.176	Pelodiscus_sinensis
ENSEASG00005018421	RPUSD1	74	55.305	ENSPMGG00000014950	rpusd1	98	55.305	Periophthalmus_magnuspinnatus
ENSEASG00005018421	RPUSD1	76	81.962	ENSPEMG00000000497	Rpusd1	100	81.646	Peromyscus_maniculatus_bairdii
ENSEASG00005018421	RPUSD1	61	55.985	ENSPMAG00000001563	rpusd1	84	55.985	Petromyzon_marinus
ENSEASG00005018421	RPUSD1	76	69.182	ENSPCIG00000021216	-	95	67.925	Phascolarctos_cinereus
ENSEASG00005018421	RPUSD1	74	56.634	ENSPFOG00000007946	rpusd1	98	56.634	Poecilia_formosa
ENSEASG00005018421	RPUSD1	74	56.958	ENSPLAG00000011925	rpusd1	98	56.634	Poecilia_latipinna
ENSEASG00005018421	RPUSD1	74	55.987	ENSPMEG00000002910	rpusd1	98	55.987	Poecilia_mexicana
ENSEASG00005018421	RPUSD1	74	56.958	ENSPREG00000019851	rpusd1	98	56.958	Poecilia_reticulata
ENSEASG00005018421	RPUSD1	75	69.206	ENSPCAG00000002258	RPUSD1	99	69.206	Procavia_capensis
ENSEASG00005018421	RPUSD1	76	88.608	ENSPCOG00000022582	RPUSD1	100	87.025	Propithecus_coquereli
ENSEASG00005018421	RPUSD1	76	85.127	ENSPVAG00000013104	RPUSD1	100	83.861	Pteropus_vampyrus
ENSEASG00005018421	RPUSD1	61	66.667	ENSPNYG00000024076	rpusd1	99	58.521	Pundamilia_nyererei
ENSEASG00005018421	RPUSD1	75	56.869	ENSPNAG00000013806	rpusd1	100	56.869	Pygocentrus_nattereri
ENSEASG00005018421	RPUSD1	76	82.595	ENSRNOG00000023639	Rpusd1	100	82.278	Rattus_norvegicus
ENSEASG00005018421	RPUSD1	75	86.349	ENSRBIG00000030238	RPUSD1	99	85.079	Rhinopithecus_bieti
ENSEASG00005018421	RPUSD1	75	86.349	ENSRROG00000036663	RPUSD1	99	85.079	Rhinopithecus_roxellana
ENSEASG00005018421	RPUSD1	75	84.444	ENSSBOG00000033063	RPUSD1	99	84.444	Saimiri_boliviensis_boliviensis
ENSEASG00005018421	RPUSD1	76	67.722	ENSSHAG00000013500	RPUSD1	100	66.772	Sarcophilus_harrisii
ENSEASG00005018421	RPUSD1	75	60.577	ENSSFOG00015014394	rpusd1	99	59.936	Scleropages_formosus
ENSEASG00005018421	RPUSD1	74	56.958	ENSSMAG00000008045	rpusd1	91	56.958	Scophthalmus_maximus
ENSEASG00005018421	RPUSD1	61	67.984	ENSSDUG00000001829	rpusd1	95	59.615	Seriola_dumerili
ENSEASG00005018421	RPUSD1	61	67.984	ENSSLDG00000020853	rpusd1	95	59.615	Seriola_lalandi_dorsalis
ENSEASG00005018421	RPUSD1	74	58.252	ENSSPAG00000012708	rpusd1	98	58.252	Stegastes_partitus
ENSEASG00005018421	RPUSD1	76	87.342	ENSSSCG00000008000	RPUSD1	99	90.272	Sus_scrofa
ENSEASG00005018421	RPUSD1	61	72.549	ENSTGUG00000015375	RPUSD1	100	72.549	Taeniopygia_guttata
ENSEASG00005018421	RPUSD1	75	56.090	ENSTRUG00000003041	rpusd1	98	56.190	Takifugu_rubripes
ENSEASG00005018421	RPUSD1	61	62.055	ENSTNIG00000002660	rpusd1	92	62.055	Tetraodon_nigroviridis
ENSEASG00005018421	RPUSD1	75	89.206	ENSTTRG00000010167	RPUSD1	99	87.619	Tursiops_truncatus
ENSEASG00005018421	RPUSD1	76	82.911	ENSUAMG00000012736	RPUSD1	100	82.911	Ursus_americanus
ENSEASG00005018421	RPUSD1	76	82.911	ENSUMAG00000021174	RPUSD1	100	82.911	Ursus_maritimus
ENSEASG00005018421	RPUSD1	76	83.861	ENSVVUG00000012357	RPUSD1	100	82.911	Vulpes_vulpes
ENSEASG00005018421	RPUSD1	76	60.127	ENSXETG00000007184	rpusd1	100	59.810	Xenopus_tropicalis
ENSEASG00005018421	RPUSD1	74	56.311	ENSXCOG00000017930	rpusd1	98	55.987	Xiphophorus_couchianus
ENSEASG00005018421	RPUSD1	74	56.958	ENSXMAG00000024084	rpusd1	98	56.958	Xiphophorus_maculatus