EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005018782 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 7206 bases
Position: chrPSZQ01008354.1:1982463-1989668
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005027589	R3H	PF01424.22	5.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005029965	R3HCC1-201	1647	-	ENSEASP00005027589	548 (aa)	-	-

Gene Model

Click here to download ENSEASG00005018782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005018782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005018782	R3HCC1	80	82.609	ENSG00000104679	R3HCC1	100	95.349	Homo_sapiens
ENSEASG00005018782	R3HCC1	60	39.007	ENSAPOG00000003616	r3hcc1	65	44.156	Acanthochromis_polyacanthus
ENSEASG00005018782	R3HCC1	81	85.360	ENSAMEG00000002963	R3HCC1	92	85.586	Ailuropoda_melanoleuca
ENSEASG00005018782	R3HCC1	78	30.952	ENSACIG00000017144	r3hcc1	84	38.889	Amphilophus_citrinellus
ENSEASG00005018782	R3HCC1	76	33.021	ENSAOCG00000003945	r3hcc1	98	33.032	Amphiprion_ocellaris
ENSEASG00005018782	R3HCC1	76	32.706	ENSAPEG00000003613	r3hcc1	98	32.127	Amphiprion_percula
ENSEASG00005018782	R3HCC1	53	40.462	ENSATEG00000023860	r3hcc1	69	43.125	Anabas_testudineus
ENSEASG00005018782	R3HCC1	79	48.519	ENSACAG00000016627	R3HCC1	97	49.666	Anolis_carolinensis
ENSEASG00005018782	R3HCC1	80	83.447	ENSANAG00000036169	R3HCC1	95	83.447	Aotus_nancymaae
ENSEASG00005018782	R3HCC1	81	81.432	ENSBTAG00000025830	R3HCC1	97	81.432	Bos_taurus
ENSEASG00005018782	R3HCC1	80	81.633	ENSCJAG00000020118	R3HCC1	99	72.998	Callithrix_jacchus
ENSEASG00005018782	R3HCC1	81	80.493	ENSCAFG00000009210	R3HCC1	97	80.942	Canis_familiaris
ENSEASG00005018782	R3HCC1	76	71.838	ENSCAFG00020012870	R3HCC1	90	75.835	Canis_lupus_dingo
ENSEASG00005018782	R3HCC1	81	76.471	ENSCHIG00000009107	R3HCC1	100	76.471	Capra_hircus
ENSEASG00005018782	R3HCC1	85	80.508	ENSTSYG00000000511	R3HCC1	78	83.900	Carlito_syrichta
ENSEASG00005018782	R3HCC1	72	59.677	ENSCAPG00000015813	R3HCC1	100	59.677	Cavia_aperea
ENSEASG00005018782	R3HCC1	80	66.316	ENSCPOG00000009696	R3HCC1	100	66.316	Cavia_porcellus
ENSEASG00005018782	R3HCC1	80	82.086	ENSCCAG00000037811	R3HCC1	92	82.086	Cebus_capucinus
ENSEASG00005018782	R3HCC1	80	82.540	ENSCATG00000032971	R3HCC1	99	74.600	Cercocebus_atys
ENSEASG00005018782	R3HCC1	81	73.094	ENSCLAG00000015556	R3HCC1	85	73.543	Chinchilla_lanigera
ENSEASG00005018782	R3HCC1	80	82.313	ENSCSAG00000016250	R3HCC1	92	82.540	Chlorocebus_sabaeus
ENSEASG00005018782	R3HCC1	80	79.954	ENSCHOG00000000396	R3HCC1	95	79.954	Choloepus_hoffmanni
ENSEASG00005018782	R3HCC1	80	82.313	ENSCANG00000029441	R3HCC1	92	82.313	Colobus_angolensis_palliatus
ENSEASG00005018782	R3HCC1	79	64.017	ENSCGRG00001014977	R3hcc1	99	63.674	Cricetulus_griseus_chok1gshd
ENSEASG00005018782	R3HCC1	79	64.017	ENSCGRG00000004454	R3hcc1	99	63.674	Cricetulus_griseus_crigri
ENSEASG00005018782	R3HCC1	77	33.100	ENSCSEG00000005748	r3hcc1	99	32.258	Cynoglossus_semilaevis
ENSEASG00005018782	R3HCC1	66	32.267	ENSCVAG00000002640	r3hcc1	95	31.733	Cyprinodon_variegatus
ENSEASG00005018782	R3HCC1	78	34.353	ENSDARG00000099593	r3hcc1	98	34.118	Danio_rerio
ENSEASG00005018782	R3HCC1	80	81.179	ENSDNOG00000007168	R3HCC1	92	81.179	Dasypus_novemcinctus
ENSEASG00005018782	R3HCC1	79	64.927	ENSDORG00000026365	R3hcc1	99	64.509	Dipodomys_ordii
ENSEASG00005018782	R3HCC1	80	70.091	ENSETEG00000001147	R3HCC1	96	70.320	Echinops_telfairi
ENSEASG00005018782	R3HCC1	100	98.358	ENSECAG00000025013	R3HCC1	100	98.358	Equus_caballus
ENSEASG00005018782	R3HCC1	83	76.484	ENSEEUG00000011918	R3HCC1	96	78.311	Erinaceus_europaeus
ENSEASG00005018782	R3HCC1	73	35.431	ENSELUG00000023650	r3hcc1	98	35.431	Esox_lucius
ENSEASG00005018782	R3HCC1	90	79.837	ENSFCAG00000012395	R3HCC1	98	85.650	Felis_catus
ENSEASG00005018782	R3HCC1	58	50.617	ENSFALG00000001646	R3HCC1	55	51.462	Ficedula_albicollis
ENSEASG00005018782	R3HCC1	79	67.679	ENSFDAG00000001572	R3HCC1	98	67.679	Fukomys_damarensis
ENSEASG00005018782	R3HCC1	79	35.506	ENSGAFG00000008747	-	93	35.697	Gambusia_affinis
ENSEASG00005018782	R3HCC1	78	34.339	ENSGACG00000008447	r3hcc1	96	34.339	Gasterosteus_aculeatus
ENSEASG00005018782	R3HCC1	80	82.151	ENSGGOG00000013817	R3HCC1	99	82.151	Gorilla_gorilla
ENSEASG00005018782	R3HCC1	80	72.936	ENSHGLG00000010517	R3HCC1	91	72.297	Heterocephalus_glaber_female
ENSEASG00005018782	R3HCC1	80	72.936	ENSHGLG00100006388	R3HCC1	91	72.297	Heterocephalus_glaber_male
ENSEASG00005018782	R3HCC1	78	34.018	ENSHCOG00000011745	r3hcc1	94	33.708	Hippocampus_comes
ENSEASG00005018782	R3HCC1	78	36.597	ENSIPUG00000024504	r3hcc1	87	35.185	Ictalurus_punctatus
ENSEASG00005018782	R3HCC1	80	69.595	ENSSTOG00000027130	R3HCC1	95	69.663	Ictidomys_tridecemlineatus
ENSEASG00005018782	R3HCC1	79	68.627	ENSJJAG00000013075	R3hcc1	99	69.935	Jaculus_jaculus
ENSEASG00005018782	R3HCC1	74	33.575	ENSKMAG00000000286	r3hcc1	69	42.857	Kryptolebias_marmoratus
ENSEASG00005018782	R3HCC1	78	40.576	ENSLACG00000011894	R3HCC1	67	52.941	Latimeria_chalumnae
ENSEASG00005018782	R3HCC1	80	35.242	ENSLOCG00000015442	r3hcc1	74	45.695	Lepisosteus_oculatus
ENSEASG00005018782	R3HCC1	82	74.187	ENSLAFG00000016137	R3HCC1	97	74.187	Loxodonta_africana
ENSEASG00005018782	R3HCC1	80	82.540	ENSMFAG00000032894	R3HCC1	99	74.600	Macaca_fascicularis
ENSEASG00005018782	R3HCC1	80	82.540	ENSMMUG00000016655	R3HCC1	91	82.766	Macaca_mulatta
ENSEASG00005018782	R3HCC1	80	82.086	ENSMNEG00000043283	R3HCC1	99	74.142	Macaca_nemestrina
ENSEASG00005018782	R3HCC1	80	82.313	ENSMLEG00000030147	R3HCC1	92	82.540	Mandrillus_leucophaeus
ENSEASG00005018782	R3HCC1	57	38.916	ENSMAMG00000018146	r3hcc1	99	30.588	Mastacembelus_armatus
ENSEASG00005018782	R3HCC1	79	46.622	ENSMGAG00000001356	R3HCC1	91	46.622	Meleagris_gallopavo
ENSEASG00005018782	R3HCC1	80	81.818	ENSMICG00000011146	R3HCC1	94	82.045	Microcebus_murinus
ENSEASG00005018782	R3HCC1	80	62.372	ENSMOCG00000018508	R3hcc1	99	61.554	Microtus_ochrogaster
ENSEASG00005018782	R3HCC1	79	52.444	ENSMODG00000016809	-	100	51.435	Monodelphis_domestica
ENSEASG00005018782	R3HCC1	73	32.512	ENSMALG00000000731	r3hcc1	98	32.274	Monopterus_albus
ENSEASG00005018782	R3HCC1	81	62.500	MGP_CAROLIEiJ_G0019467	R3hcc1	99	59.879	Mus_caroli
ENSEASG00005018782	R3HCC1	81	61.895	ENSMUSG00000034194	R3hcc1	99	59.274	Mus_musculus
ENSEASG00005018782	R3HCC1	79	61.616	MGP_PahariEiJ_G0030484	R3hcc1	99	51.004	Mus_pahari
ENSEASG00005018782	R3HCC1	81	61.492	MGP_SPRETEiJ_G0020359	R3hcc1	99	58.824	Mus_spretus
ENSEASG00005018782	R3HCC1	86	80.585	ENSMPUG00000003457	R3HCC1	88	84.305	Mustela_putorius_furo
ENSEASG00005018782	R3HCC1	81	81.798	ENSMLUG00000000266	R3HCC1	93	82.697	Myotis_lucifugus
ENSEASG00005018782	R3HCC1	80	71.272	ENSNGAG00000016747	R3hcc1	99	70.833	Nannospalax_galili
ENSEASG00005018782	R3HCC1	73	81.955	ENSNLEG00000015944	R3HCC1	86	81.955	Nomascus_leucogenys
ENSEASG00005018782	R3HCC1	80	60.225	ENSMEUG00000010587	R3HCC1	99	59.551	Notamacropus_eugenii
ENSEASG00005018782	R3HCC1	81	69.283	ENSOPRG00000013390	R3HCC1	96	69.283	Ochotona_princeps
ENSEASG00005018782	R3HCC1	79	66.809	ENSODEG00000007529	R3HCC1	99	67.437	Octodon_degus
ENSEASG00005018782	R3HCC1	80	60.626	ENSOANG00000013877	R3HCC1	97	61.830	Ornithorhynchus_anatinus
ENSEASG00005018782	R3HCC1	81	70.404	ENSOCUG00000023554	R3HCC1	87	69.845	Oryctolagus_cuniculus
ENSEASG00005018782	R3HCC1	74	33.090	ENSORLG00000016816	r3hcc1	99	33.333	Oryzias_latipes
ENSEASG00005018782	R3HCC1	74	33.333	ENSORLG00020012005	r3hcc1	75	45.395	Oryzias_latipes_hni
ENSEASG00005018782	R3HCC1	74	33.820	ENSORLG00015007018	r3hcc1	99	33.174	Oryzias_latipes_hsok
ENSEASG00005018782	R3HCC1	74	32.000	ENSOMEG00000000816	r3hcc1	77	42.763	Oryzias_melastigma
ENSEASG00005018782	R3HCC1	80	78.767	ENSOGAG00000001291	R3HCC1	92	78.767	Otolemur_garnettii
ENSEASG00005018782	R3HCC1	81	81.208	ENSOARG00000010146	R3HCC1	97	81.208	Ovis_aries
ENSEASG00005018782	R3HCC1	80	82.609	ENSPPAG00000033165	R3HCC1	99	82.609	Pan_paniscus
ENSEASG00005018782	R3HCC1	79	85.253	ENSPPRG00000002522	R3HCC1	99	85.945	Panthera_pardus
ENSEASG00005018782	R3HCC1	73	84.461	ENSPTIG00000011230	R3HCC1	95	84.750	Panthera_tigris_altaica
ENSEASG00005018782	R3HCC1	80	83.562	ENSPTRG00000020076	R3HCC1	99	77.419	Pan_troglodytes
ENSEASG00005018782	R3HCC1	80	82.313	ENSPANG00000000453	R3HCC1	92	82.540	Papio_anubis
ENSEASG00005018782	R3HCC1	72	37.594	ENSPKIG00000020397	-	95	37.594	Paramormyrops_kingsleyae
ENSEASG00005018782	R3HCC1	72	37.750	ENSPKIG00000014426	-	95	38.442	Paramormyrops_kingsleyae
ENSEASG00005018782	R3HCC1	79	50.000	ENSPSIG00000017664	R3HCC1	98	49.011	Pelodiscus_sinensis
ENSEASG00005018782	R3HCC1	80	64.301	ENSPEMG00000007118	R3hcc1	99	64.092	Peromyscus_maniculatus_bairdii
ENSEASG00005018782	R3HCC1	73	54.458	ENSPCIG00000022718	-	85	54.567	Phascolarctos_cinereus
ENSEASG00005018782	R3HCC1	78	35.484	ENSPFOG00000022301	r3hcc1	65	45.033	Poecilia_formosa
ENSEASG00005018782	R3HCC1	53	45.775	ENSPLAG00000010794	r3hcc1	90	35.747	Poecilia_latipinna
ENSEASG00005018782	R3HCC1	78	35.484	ENSPMEG00000022515	r3hcc1	65	45.033	Poecilia_mexicana
ENSEASG00005018782	R3HCC1	78	35.682	ENSPREG00000000713	r3hcc1	90	34.312	Poecilia_reticulata
ENSEASG00005018782	R3HCC1	74	82.134	ENSPPYG00000018436	R3HCC1	99	82.134	Pongo_abelii
ENSEASG00005018782	R3HCC1	60	85.526	ENSPCAG00000012229	R3HCC1	72	85.526	Procavia_capensis
ENSEASG00005018782	R3HCC1	80	82.110	ENSPCOG00000027554	R3HCC1	99	81.881	Propithecus_coquereli
ENSEASG00005018782	R3HCC1	80	82.805	ENSPVAG00000009829	R3HCC1	96	82.805	Pteropus_vampyrus
ENSEASG00005018782	R3HCC1	75	33.333	ENSPNAG00000023875	r3hcc1	99	33.976	Pygocentrus_nattereri
ENSEASG00005018782	R3HCC1	81	63.380	ENSRNOG00000016777	AABR07018321.1	82	61.972	Rattus_norvegicus
ENSEASG00005018782	R3HCC1	80	83.066	ENSRBIG00000028045	R3HCC1	99	83.066	Rhinopithecus_bieti
ENSEASG00005018782	R3HCC1	80	82.766	ENSRROG00000031126	R3HCC1	99	75.057	Rhinopithecus_roxellana
ENSEASG00005018782	R3HCC1	79	81.379	ENSSBOG00000022590	R3HCC1	99	81.379	Saimiri_boliviensis_boliviensis
ENSEASG00005018782	R3HCC1	80	52.550	ENSSHAG00000016526	-	99	52.550	Sarcophilus_harrisii
ENSEASG00005018782	R3HCC1	73	36.453	ENSSFOG00015013507	r3hcc1	98	36.207	Scleropages_formosus
ENSEASG00005018782	R3HCC1	74	31.529	ENSSMAG00000008647	r3hcc1	99	30.425	Scophthalmus_maximus
ENSEASG00005018782	R3HCC1	56	83.688	ENSSARG00000013514	-	71	83.688	Sorex_araneus
ENSEASG00005018782	R3HCC1	76	32.265	ENSSPAG00000013497	r3hcc1	98	32.273	Stegastes_partitus
ENSEASG00005018782	R3HCC1	79	76.443	ENSSSCG00000037347	-	89	76.443	Sus_scrofa
ENSEASG00005018782	R3HCC1	81	83.857	ENSSSCG00000039915	-	94	83.857	Sus_scrofa
ENSEASG00005018782	R3HCC1	77	32.339	ENSTRUG00000015880	r3hcc1	98	31.640	Takifugu_rubripes
ENSEASG00005018782	R3HCC1	80	77.727	ENSTTRG00000012247	R3HCC1	96	77.727	Tursiops_truncatus
ENSEASG00005018782	R3HCC1	81	83.258	ENSUAMG00000007344	R3HCC1	100	83.484	Ursus_americanus
ENSEASG00005018782	R3HCC1	81	81.614	ENSVVUG00000005056	R3HCC1	97	81.390	Vulpes_vulpes
ENSEASG00005018782	R3HCC1	75	35.529	ENSXCOG00000017626	r3hcc1	89	35.897	Xiphophorus_couchianus
ENSEASG00005018782	R3HCC1	79	35.281	ENSXMAG00000018375	r3hcc1	92	36.098	Xiphophorus_maculatus